FFCP PHASE1:Mm9::chr4:119310332..119310344,+: Difference between revisions
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{{FFCP|EntrezGene=14915|HGNC=|MCL_coexpression_id=424|UniProt=A2AA36,P33680|association_with_transcript=0bp_to_NM_008190,uc008umv.1_5end|description=CAGE_peak_2_at_Guca2a_5end|id=chr4:119310332..119310344,+|ontology_enrichment_celltype=CL:0002563!8.58e-09!9;CL:0002251!8.58e-09!9;CL:0000239!9.40e-09!6;CL:0000677!9.40e-09!6;CL:0000212!9.40e-09!6;CL:0000584!9.40e-09!6;CL:0000075!2.54e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,9.50e-18,6;CL:0000677,9.50e-18,6;CL:0000584,9.50e-18,6;CL:0000075,3.94e-15,7;CL:0002563,1.23e-11,9;CL:0002251,1.23e-11,9;CL:0000682,2.11e-10,3;CL:0000066,1.45e-08,25;CL:0002076,9.85e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.41e-17!43;UBERON:0000344!2.91e-16!15;UBERON:0001242!1.17e-13!13;UBERON:0000060!1.17e-13!13;UBERON:0001262!1.17e-13!13;UBERON:0004786!1.17e-13!13;UBERON:0005409!4.38e-13!59;UBERON:0004923!4.92e-10!24;UBERON:0003350!8.58e-09!9;UBERON:0004808!8.58e-09!9;UBERON:0001277!8.58e-09!9;UBERON:0000485!7.54e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-42,31;UBERON:0005409,1.79e-29,47;UBERON:0000344,1.53e-23,15;UBERON:0001242,3.64e-18,13;UBERON:0001262,3.64e-18,13;UBERON:0004786,3.64e-18,13;UBERON:0004923,1.49e-16,24;UBERON:0002108,4.17e-13,4;UBERON:0004119,1.80e-12,118;UBERON:0000925,1.80e-12,118;UBERON:0006595,1.80e-12,118;UBERON:0003350,1.23e-11,9;UBERON:0004808,1.23e-11,9;UBERON:0001277,1.23e-11,9;UBERON:0001007,1.54e-11,116;UBERON:0001555,1.54e-11,116;UBERON:0007026,1.54e-11,116;UBERON:0000331,8.88e-11,3;UBERON:0002116,8.88e-11,3;UBERON:0001204,8.88e-11,3;UBERON:0001168,8.88e-11,3;UBERON:0000485,2.08e-09,11;UBERON:0004921,2.11e-09,114;UBERON:0001962,1.78e-07,2;UBERON:0001961,1.78e-07,2;UBERON:0001744,1.78e-07,2;UBERON:0001155,3.38e-07,2;UBERON:0000059,3.38e-07,2|phase1_expression=0,10.4692622291808,7.27998783023258,7.56160528267075,1.50268718983904,7.21880869221126,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8394392867121,15.8292403936347,16.0784949952206,15.5074318617267,10.9890328669803,32.4940047270399,15.6258680451157,30.3770799597767,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0061874679869,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.11560453330835,0,0,0.38660238396628,2.21851877085677,0.667134131534611,4.56541502670142,1.89811624617805,7.5761519173045,4.52403375840485,5.37182474511107,4.874102177978,0,6.26800344636613,6.96994456390285,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10146440965647,0,0,1.48397627647332,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,19.0534010738935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.191288332068843,0,0|short_description=p2@Guca2a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14915 | |||
|HGNC= | |||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AA36,uniprot:P33680 | |||
|association_with_transcript=0bp_to_NM_008190,uc008umv.1_5end | |||
|cluster_id=chr4:119310332..119310344,+ | |||
|description=CAGE_peak_2_at_Guca2a_5end | |||
|id=chr4:119310332..119310344,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.58e-09!9;CL:0002251!8.58e-09!9;CL:0000239!9.40e-09!6;CL:0000677!9.40e-09!6;CL:0000212!9.40e-09!6;CL:0000584!9.40e-09!6;CL:0000075!2.54e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.50e-18,6;CL:0000677,9.50e-18,6;CL:0000584,9.50e-18,6;CL:0000075,3.94e-15,7;CL:0002563,1.23e-11,9;CL:0002251,1.23e-11,9;CL:0000682,2.11e-10,3;CL:0000066,1.45e-08,25;CL:0002076,9.85e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.41e-17!43;UBERON:0000344!2.91e-16!15;UBERON:0001242!1.17e-13!13;UBERON:0000060!1.17e-13!13;UBERON:0001262!1.17e-13!13;UBERON:0004786!1.17e-13!13;UBERON:0005409!4.38e-13!59;UBERON:0004923!4.92e-10!24;UBERON:0003350!8.58e-09!9;UBERON:0004808!8.58e-09!9;UBERON:0001277!8.58e-09!9;UBERON:0000485!7.54e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.62e-42,31;UBERON:0005409,1.79e-29,47;UBERON:0000344,1.53e-23,15;UBERON:0001242,3.64e-18,13;UBERON:0001262,3.64e-18,13;UBERON:0004786,3.64e-18,13;UBERON:0004923,1.49e-16,24;UBERON:0002108,4.17e-13,4;UBERON:0004119,1.80e-12,118;UBERON:0000925,1.80e-12,118;UBERON:0006595,1.80e-12,118;UBERON:0003350,1.23e-11,9;UBERON:0004808,1.23e-11,9;UBERON:0001277,1.23e-11,9;UBERON:0001007,1.54e-11,116;UBERON:0001555,1.54e-11,116;UBERON:0007026,1.54e-11,116;UBERON:0000331,8.88e-11,3;UBERON:0002116,8.88e-11,3;UBERON:0001204,8.88e-11,3;UBERON:0001168,8.88e-11,3;UBERON:0000485,2.08e-09,11;UBERON:0004921,2.11e-09,114;UBERON:0001962,1.78e-07,2;UBERON:0001961,1.78e-07,2;UBERON:0001744,1.78e-07,2;UBERON:0001155,3.38e-07,2;UBERON:0000059,3.38e-07,2 | |||
|phase1_expression=0,10.4692622291808,7.27998783023258,7.56160528267075,1.50268718983904,7.21880869221126,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8394392867121,15.8292403936347,16.0784949952206,15.5074318617267,10.9890328669803,32.4940047270399,15.6258680451157,30.3770799597767,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0061874679869,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.11560453330835,0,0,0.38660238396628,2.21851877085677,0.667134131534611,4.56541502670142,1.89811624617805,7.5761519173045,4.52403375840485,5.37182474511107,4.874102177978,0,6.26800344636613,6.96994456390285,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10146440965647,0,0,1.48397627647332,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,19.0534010738935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.701794825336225,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p2@Guca2a | |||
}} |
Revision as of 16:13, 4 August 2015
Short description: | p2@Guca2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Guca2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | 0bp_to_NM_008190, uc008umv.1_5end |
EntrezGene: | 14915 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.50e-18 | 6 |
gut absorptive cell | 9.50e-18 | 6 |
enterocyte | 9.50e-18 | 6 |
columnar/cuboidal epithelial cell | 3.94e-15 | 7 |
intestinal epithelial cell | 1.23e-11 | 9 |
epithelial cell of alimentary canal | 1.23e-11 | 9 |
M cell of gut | 2.11e-10 | 3 |
epithelial cell | 1.45e-08 | 25 |
endo-epithelial cell | 9.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.62e-42 | 31 |
gastrointestinal system | 1.79e-29 | 47 |
mucosa | 1.53e-23 | 15 |
intestinal mucosa | 3.64e-18 | 13 |
wall of intestine | 3.64e-18 | 13 |
gastrointestinal system mucosa | 3.64e-18 | 13 |
organ component layer | 1.49e-16 | 24 |
small intestine | 4.17e-13 | 4 |
endoderm-derived structure | 1.80e-12 | 118 |
endoderm | 1.80e-12 | 118 |
presumptive endoderm | 1.80e-12 | 118 |
epithelium of mucosa | 1.23e-11 | 9 |
gastrointestinal system epithelium | 1.23e-11 | 9 |
intestinal epithelium | 1.23e-11 | 9 |
digestive system | 1.54e-11 | 116 |
digestive tract | 1.54e-11 | 116 |
primitive gut | 1.54e-11 | 116 |
ileal mucosa | 8.88e-11 | 3 |
ileum | 8.88e-11 | 3 |
mucosa of small intestine | 8.88e-11 | 3 |
wall of small intestine | 8.88e-11 | 3 |
simple columnar epithelium | 2.08e-09 | 11 |
subdivision of digestive tract | 2.11e-09 | 114 |
gut-associated lymphoid tissue | 1.78e-07 | 2 |
mucosa-associated lymphoid tissue | 1.78e-07 | 2 |
lymphoid tissue | 1.78e-07 | 2 |
colon | 3.38e-07 | 2 |
large intestine | 3.38e-07 | 2 |