FFCP PHASE1:Mm9::chr14:61103994..61104005,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=133|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:61103994..61104005,+|id=chr14:61103994..61104005,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000710,6.32e-07,1;CL:0002077,6.32e-07,1;CL:0005014,6.32e-07,1;CL:0002315,6.32e-07,1;CL:0002490,6.32e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!6.90e-09!8;UBERON:0003296!6.90e-09!8;UBERON:0010133!6.90e-09!8;UBERON:0000020!1.84e-07!12;UBERON:0001032!1.84e-07!12;UBERON:0004456!1.84e-07!12;UBERON:0000033!9.44e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.13e-33,9;UBERON:0000019,8.13e-33,9;UBERON:0000047,8.13e-33,9;UBERON:0010312,8.13e-33,9;UBERON:0004088,8.13e-33,9;UBERON:0002104,8.13e-33,9;UBERON:0001456,8.13e-33,9;UBERON:0003072,8.13e-33,9;UBERON:0004128,8.13e-33,9;UBERON:0003071,8.13e-33,9;UBERON:0000020,1.46e-31,12;UBERON:0001032,1.46e-31,12;UBERON:0004456,1.46e-31,12;UBERON:0000033,4.41e-29,13;UBERON:0005085,4.41e-29,13;UBERON:0001444,9.10e-27,11;UBERON:0000007,4.68e-18,8;UBERON:0003296,4.68e-18,8;UBERON:0010133,4.68e-18,8;UBERON:0003056,3.39e-16,49;UBERON:0001894,1.90e-14,10;UBERON:0006222,1.90e-14,10;UBERON:0010371,2.70e-12,73;UBERON:0002346,4.67e-12,64;UBERON:0003075,4.67e-12,64;UBERON:0007284,4.67e-12,64;UBERON:0004121,1.17e-10,95;UBERON:0000924,1.17e-10,95;UBERON:0006601,1.17e-10,95;UBERON:0007811,5.34e-10,36;UBERON:0010314,2.03e-09,92;UBERON:0000153,3.15e-08,43|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,0,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0,0.659431438650969,0.457438218012048,0,0,0,0,0,0.284743361598206,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,4.94457683258274,5.0578462975364,4.14142898552303,4.52114453507145,4.55844544313897,2.0498195245576,1.49922759295566,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0.315270288212382,0,0.159454768657487,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,0.388076051348264,1.28602221018955,1.41872186913819,1.24858172321449,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0,0.581385666529314,0.188218760830661,0.507687647350059,0,0,0,0.561142271657738,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,0.999242311751784,0,0.429742108096597,0.191288332068843,0,0|short_description=p@chr14:61103994..61104005,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:61103994..61104005,+ | |||
|description=CAGE_peak_at_chr14:61103994..61104005,+ | |||
|id=chr14:61103994..61104005,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,6.32e-07,1;CL:0002077,6.32e-07,1;CL:0005014,6.32e-07,1;CL:0002315,6.32e-07,1;CL:0002490,6.32e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!6.90e-09!8;UBERON:0003296!6.90e-09!8;UBERON:0010133!6.90e-09!8;UBERON:0000020!1.84e-07!12;UBERON:0001032!1.84e-07!12;UBERON:0004456!1.84e-07!12;UBERON:0000033!9.44e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.13e-33,9;UBERON:0000019,8.13e-33,9;UBERON:0000047,8.13e-33,9;UBERON:0010312,8.13e-33,9;UBERON:0004088,8.13e-33,9;UBERON:0002104,8.13e-33,9;UBERON:0001456,8.13e-33,9;UBERON:0003072,8.13e-33,9;UBERON:0004128,8.13e-33,9;UBERON:0003071,8.13e-33,9;UBERON:0000020,1.46e-31,12;UBERON:0001032,1.46e-31,12;UBERON:0004456,1.46e-31,12;UBERON:0000033,4.41e-29,13;UBERON:0005085,4.41e-29,13;UBERON:0001444,9.10e-27,11;UBERON:0000007,4.68e-18,8;UBERON:0003296,4.68e-18,8;UBERON:0010133,4.68e-18,8;UBERON:0003056,3.39e-16,49;UBERON:0001894,1.90e-14,10;UBERON:0006222,1.90e-14,10;UBERON:0010371,2.70e-12,73;UBERON:0002346,4.67e-12,64;UBERON:0003075,4.67e-12,64;UBERON:0007284,4.67e-12,64;UBERON:0004121,1.17e-10,95;UBERON:0000924,1.17e-10,95;UBERON:0006601,1.17e-10,95;UBERON:0007811,5.34e-10,36;UBERON:0010314,2.03e-09,92;UBERON:0000153,3.15e-08,43 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,0,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0,0.659431438650969,0.457438218012048,0,0,0,0,0,0.284743361598206,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,4.94457683258274,5.0578462975364,4.14142898552303,4.52114453507145,4.55844544313897,2.0498195245576,1.49922759295566,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0.315270288212382,0,0.159454768657487,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,0.388076051348264,1.28602221018955,1.41872186913819,1.24858172321449,1.97458824722545,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.518936737920883,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0,0.581385666529314,0.188218760830661,0.507687647350059,0,0,0,0.561142271657738,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,0.999242311751784,0,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr14:61103994..61104005,+ | |||
}} |
Latest revision as of 14:09, 4 August 2015
Short description: | p@chr14:61103994..61104005, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:61103994..61104005, + |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 6.32e-07 | 1 |
ecto-epithelial cell | 6.32e-07 | 1 |
auditory epithelial support cell | 6.32e-07 | 1 |
supporting cell of cochlea | 6.32e-07 | 1 |
organ of Corti supporting cell | 6.32e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
eye | 8.13e-33 | 9 |
camera-type eye | 8.13e-33 | 9 |
simple eye | 8.13e-33 | 9 |
immature eye | 8.13e-33 | 9 |
ocular region | 8.13e-33 | 9 |
visual system | 8.13e-33 | 9 |
face | 8.13e-33 | 9 |
optic cup | 8.13e-33 | 9 |
optic vesicle | 8.13e-33 | 9 |
eye primordium | 8.13e-33 | 9 |
sense organ | 1.46e-31 | 12 |
sensory system | 1.46e-31 | 12 |
entire sense organ system | 1.46e-31 | 12 |
head | 4.41e-29 | 13 |
ectodermal placode | 4.41e-29 | 13 |
subdivision of head | 9.10e-27 | 11 |
pituitary gland | 4.68e-18 | 8 |
gland of diencephalon | 4.68e-18 | 8 |
neuroendocrine gland | 4.68e-18 | 8 |
pre-chordal neural plate | 3.39e-16 | 49 |
diencephalon | 1.90e-14 | 10 |
future diencephalon | 1.90e-14 | 10 |
ecto-epithelium | 2.70e-12 | 73 |
neurectoderm | 4.67e-12 | 64 |
neural plate | 4.67e-12 | 64 |
presumptive neural plate | 4.67e-12 | 64 |
ectoderm-derived structure | 1.17e-10 | 95 |
ectoderm | 1.17e-10 | 95 |
presumptive ectoderm | 1.17e-10 | 95 |
craniocervical region | 5.34e-10 | 36 |
structure with developmental contribution from neural crest | 2.03e-09 | 92 |
anterior region of body | 3.15e-08 | 43 |