FFCP PHASE1:Mm9::chr19:8895800..8895821,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=727|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:8895800..8895821,-|id=chr19:8895800..8895821,-|ontology_enrichment_celltype=CL:0002563!1.64e-07!9;CL:0002251!1.64e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.27e-11,9;CL:0002251,7.27e-11,9;CL:0000239,1.73e-08,6;CL:0000677,1.73e-08,6;CL:0000584,1.73e-08,6;CL:0000066,2.26e-08,25;CL:0000075,4.00e-07,7;CL:0000223,6.31e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.69e-26!59;UBERON:0000160!1.30e-25!43;UBERON:0001007!8.29e-19!128;UBERON:0001555!8.29e-19!128;UBERON:0007026!8.29e-19!128;UBERON:0004119!4.21e-18!130;UBERON:0000925!4.21e-18!130;UBERON:0006595!4.21e-18!130;UBERON:0004921!1.58e-17!126;UBERON:0004185!1.58e-17!126;UBERON:0000344!6.42e-12!15;UBERON:0001242!1.69e-10!13;UBERON:0000060!1.69e-10!13;UBERON:0001262!1.69e-10!13;UBERON:0004786!1.69e-10!13;UBERON:0002113!1.17e-07!14;UBERON:0003918!1.17e-07!14;UBERON:0005095!1.17e-07!14;UBERON:0007687!1.17e-07!14;UBERON:0003350!1.64e-07!9;UBERON:0004808!1.64e-07!9;UBERON:0001277!1.64e-07!9;UBERON:0002108!1.75e-07!16;UBERON:0005172!2.47e-07!49;UBERON:0005173!2.47e-07!49;UBERON:0002417!2.47e-07!49;UBERON:0000916!2.47e-07!49;UBERON:0001008!3.76e-07!17;UBERON:0004923!5.23e-07!24;UBERON:0006554!5.44e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-30,31;UBERON:0005409,6.19e-29,47;UBERON:0000344,9.54e-18,15;UBERON:0001007,3.18e-16,116;UBERON:0001555,3.18e-16,116;UBERON:0007026,3.18e-16,116;UBERON:0004119,1.01e-15,118;UBERON:0000925,1.01e-15,118;UBERON:0006595,1.01e-15,118;UBERON:0001242,1.59e-15,13;UBERON:0001262,1.59e-15,13;UBERON:0004786,1.59e-15,13;UBERON:0004921,1.08e-14,114;UBERON:0004923,7.05e-11,24;UBERON:0003350,7.27e-11,9;UBERON:0004808,7.27e-11,9;UBERON:0001277,7.27e-11,9;UBERON:0000485,1.63e-08,11;UBERON:0002113,9.24e-07,14;UBERON:0003918,9.24e-07,14;UBERON:0011143,9.24e-07,14;UBERON:0005095,9.24e-07,14;UBERON:0007687,9.24e-07,14|phase1_expression=0,5.23463111459042,5.45999087267443,12.0985684522732,8.5152274090879,2.35030980676646,1.63528848416868,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,5.11975752938901,2.98232065387321,1.72269589234506,7.32295393470427,2.80112602491656,6.46079626151671,4.78857246543868,1.33038306393183,0,0,0,1.44425809875637,1.16364251750945,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,1.61910957491345,3.89865850468601,0.896053774194671,1.54488862144927,0,0,0,0,0,0,0,0.216491041011214,0,0,4.11061966988616,0,0,0,0,0.230615497256059,0,0,0,1.97755974187499,0,0,0,0,0,7.45567044872489,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,3.0326731012041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0506219494284,10.3135720998782,0,0.232236671860439,0.77320476793256,2.21851877085677,4.44756087689741,3.61428689613862,9.01605216934572,6.75265714368445,5.27803938480566,3.58121649674071,3.70431765526328,12.5834717211591,6.70027954611552,7.76650965692032,0.569003702859245,0.913988100877831,1.1270773567308,2.03651327845314,3.49114476901726,3.36651935473529,8.03104021478068,14.3181843540214,14.9148791449306,9.99517027766584,3.85388415213294,0,0,0,1.21716072833102,1.20588579876208,0.25462585178142,0,0.162135226775035,0.823684239564244,2.87536413054709,1.86070473834252,2.49630138491648,1.01031551178845,2.69096120282868,2.41221760681684,0,0,0.162964976442026,0,0,0,0,0.780534591431195,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0.604647113929502,1.50884063804718,0.590603785761546,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0.206386867963223,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,0.756037385752609,1.25452977608681,2.62035076495413,3.10187996685088,1.48776220305605,3.66458318777641,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0,0.842773567228942,0.256100609619477,0.402048282689293,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,0.953744759789284,0,1.12931256498397,0.0846146078916765,0.548783918618318,0.263069711437843,0.950628796921032,0,0.355905054372522,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr19:8895800..8895821,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=727 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:8895800..8895821,- | |||
|description=CAGE_peak_at_chr19:8895800..8895821,- | |||
|id=chr19:8895800..8895821,- | |||
|ontology_enrichment_celltype=CL:0002563!1.64e-07!9;CL:0002251!1.64e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.27e-11,9;CL:0002251,7.27e-11,9;CL:0000239,1.73e-08,6;CL:0000677,1.73e-08,6;CL:0000584,1.73e-08,6;CL:0000066,2.26e-08,25;CL:0000075,4.00e-07,7;CL:0000223,6.31e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.69e-26!59;UBERON:0000160!1.30e-25!43;UBERON:0001007!8.29e-19!128;UBERON:0001555!8.29e-19!128;UBERON:0007026!8.29e-19!128;UBERON:0004119!4.21e-18!130;UBERON:0000925!4.21e-18!130;UBERON:0006595!4.21e-18!130;UBERON:0004921!1.58e-17!126;UBERON:0004185!1.58e-17!126;UBERON:0000344!6.42e-12!15;UBERON:0001242!1.69e-10!13;UBERON:0000060!1.69e-10!13;UBERON:0001262!1.69e-10!13;UBERON:0004786!1.69e-10!13;UBERON:0002113!1.17e-07!14;UBERON:0003918!1.17e-07!14;UBERON:0005095!1.17e-07!14;UBERON:0007687!1.17e-07!14;UBERON:0003350!1.64e-07!9;UBERON:0004808!1.64e-07!9;UBERON:0001277!1.64e-07!9;UBERON:0002108!1.75e-07!16;UBERON:0005172!2.47e-07!49;UBERON:0005173!2.47e-07!49;UBERON:0002417!2.47e-07!49;UBERON:0000916!2.47e-07!49;UBERON:0001008!3.76e-07!17;UBERON:0004923!5.23e-07!24;UBERON:0006554!5.44e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-30,31;UBERON:0005409,6.19e-29,47;UBERON:0000344,9.54e-18,15;UBERON:0001007,3.18e-16,116;UBERON:0001555,3.18e-16,116;UBERON:0007026,3.18e-16,116;UBERON:0004119,1.01e-15,118;UBERON:0000925,1.01e-15,118;UBERON:0006595,1.01e-15,118;UBERON:0001242,1.59e-15,13;UBERON:0001262,1.59e-15,13;UBERON:0004786,1.59e-15,13;UBERON:0004921,1.08e-14,114;UBERON:0004923,7.05e-11,24;UBERON:0003350,7.27e-11,9;UBERON:0004808,7.27e-11,9;UBERON:0001277,7.27e-11,9;UBERON:0000485,1.63e-08,11;UBERON:0002113,9.24e-07,14;UBERON:0003918,9.24e-07,14;UBERON:0011143,9.24e-07,14;UBERON:0005095,9.24e-07,14;UBERON:0007687,9.24e-07,14 | |||
|phase1_expression=0,5.23463111459042,5.45999087267443,12.0985684522732,8.5152274090879,2.35030980676646,1.63528848416868,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,5.11975752938901,2.98232065387321,1.72269589234506,7.32295393470427,2.80112602491656,6.46079626151671,4.78857246543868,1.33038306393183,0,0,0,1.44425809875637,1.16364251750945,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,1.61910957491345,3.89865850468601,0.896053774194671,1.54488862144927,0,0,0,0,0,0,0,0.216491041011214,0,0,4.11061966988616,0,0,0,0,0.230615497256059,0,0,0,1.97755974187499,0,0,0,0,0,7.45567044872489,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,3.0326731012041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0506219494284,10.3135720998782,0,0.232236671860439,0.77320476793256,2.21851877085677,4.44756087689741,3.61428689613862,9.01605216934572,6.75265714368445,5.27803938480566,3.58121649674071,3.70431765526328,12.5834717211591,6.70027954611552,7.76650965692032,0.569003702859245,0.913988100877831,1.1270773567308,2.03651327845314,3.49114476901726,3.36651935473529,8.03104021478068,14.3181843540214,14.9148791449306,9.99517027766584,3.85388415213294,0,0,0,1.21716072833102,1.20588579876208,0.25462585178142,0,0.162135226775035,0.823684239564244,2.87536413054709,1.86070473834252,2.49630138491648,1.01031551178845,2.69096120282868,2.41221760681684,0,0,0.162964976442026,0,0,0,0,0.780534591431195,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0.604647113929502,1.50884063804718,0.590603785761546,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0.206386867963223,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,0.756037385752609,1.25452977608681,2.62035076495413,3.10187996685088,1.48776220305605,3.66458318777641,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0,0.842773567228942,0.256100609619477,0.402048282689293,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,0.883193520806384,0.342869252385415,0.354951612318675,0.953744759789284,0,1.12931256498397,0.0846146078916765,0.548783918618318,0.263069711437843,0.950628796921032,0,0.355905054372522,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr19:8895800..8895821,- | |||
}} |
Latest revision as of 13:59, 4 August 2015
Short description: | p@chr19:8895800..8895821, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:8895800..8895821, - |
Coexpression cluster: | MCL_coexpression_mm9:727 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.27e-11 | 9 |
epithelial cell of alimentary canal | 7.27e-11 | 9 |
brush border epithelial cell | 1.73e-08 | 6 |
gut absorptive cell | 1.73e-08 | 6 |
enterocyte | 1.73e-08 | 6 |
epithelial cell | 2.26e-08 | 25 |
columnar/cuboidal epithelial cell | 4.00e-07 | 7 |
endodermal cell | 6.31e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-30 | 31 |
gastrointestinal system | 6.19e-29 | 47 |
mucosa | 9.54e-18 | 15 |
digestive system | 3.18e-16 | 116 |
digestive tract | 3.18e-16 | 116 |
primitive gut | 3.18e-16 | 116 |
endoderm-derived structure | 1.01e-15 | 118 |
endoderm | 1.01e-15 | 118 |
presumptive endoderm | 1.01e-15 | 118 |
intestinal mucosa | 1.59e-15 | 13 |
wall of intestine | 1.59e-15 | 13 |
gastrointestinal system mucosa | 1.59e-15 | 13 |
subdivision of digestive tract | 1.08e-14 | 114 |
organ component layer | 7.05e-11 | 24 |
epithelium of mucosa | 7.27e-11 | 9 |
gastrointestinal system epithelium | 7.27e-11 | 9 |
intestinal epithelium | 7.27e-11 | 9 |
simple columnar epithelium | 1.63e-08 | 11 |
kidney | 9.24e-07 | 14 |
kidney mesenchyme | 9.24e-07 | 14 |
upper urinary tract | 9.24e-07 | 14 |
kidney rudiment | 9.24e-07 | 14 |
kidney field | 9.24e-07 | 14 |