FFCP PHASE1:Mm9::chr4:11129557..11129560,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:11129557..11129560,+|id=chr4:11129557..11129560,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,5.14e-15,3;CL:0002006,5.14e-15,3;CL:0002024,5.14e-15,3;CL:0000553,9.33e-08,6;CL:0000556,9.33e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!3.06e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.84e-13,6;UBERON:0004457,3.84e-13,6;UBERON:0000042,3.84e-13,6;UBERON:0004854,3.84e-13,6;UBERON:0009034,3.84e-13,6;UBERON:0002095,3.84e-13,6;UBERON:0004782,3.84e-13,6;UBERON:0003281,3.84e-13,6;UBERON:0009664,3.84e-13,6;UBERON:0002296,3.84e-13,6;UBERON:0005602,3.84e-13,6;UBERON:0001179,3.84e-13,6;UBERON:0006293,3.84e-13,6;UBERON:0002390,5.36e-09,45;UBERON:0003061,5.36e-09,45;UBERON:0002193,2.42e-08,48;UBERON:0002405,2.42e-08,48;UBERON:0003887,6.09e-08,10;UBERON:0001041,7.79e-08,80;UBERON:0004177,3.66e-07,29;UBERON:0005057,3.66e-07,29|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0.0874204024189974,1.33243904726265,1.61980213911861,2.09868563438444,0,0,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0.485510353031154,0.503587271902309,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,1.55871602761721,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,2.20841518460394,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.870848794270651,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.512454881139399,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0.617068451549513,0.697601834251224,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.205809224758569,0,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0.444756087689741,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.316182685621286,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0.786235980452812,0.674586337154561,1.21716072833102,1.20588579876208,0.50925170356284,0.575392274901621,1.29708181420028,1.64736847912849,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.169745085775188,1.40814148973101,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0,0.422190474497091,0.238744688006273,0,0.582961673259701,0,0.512612642393558,0.206386867963223,1.11116716421827,3.57900068308913,4.78429797023588,1.60144721244566,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.524296722128554,0.966336483304024,0.576060012515731,0,0,0.308132871494482,0.25984164595559,0.716106782669926,0.596044064343795,0.841368146639782,1.03382669022204,0.908698049533329,1.295515713135,1.20991422164209,0.487289403698762,0.577271049841977,0.818138315270983,0,0.221985953374065,0.897138566094757,0.839423081820392,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.463537303779422,0.192909220463705,0,0,1.37147700954166,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p@chr4:11129557..11129560,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:11129557..11129560,+ | |||
|description=CAGE_peak_at_chr4:11129557..11129560,+ | |||
|id=chr4:11129557..11129560,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,5.14e-15,3;CL:0002006,5.14e-15,3;CL:0002024,5.14e-15,3;CL:0000553,9.33e-08,6;CL:0000556,9.33e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!3.06e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.84e-13,6;UBERON:0004457,3.84e-13,6;UBERON:0000042,3.84e-13,6;UBERON:0004854,3.84e-13,6;UBERON:0009034,3.84e-13,6;UBERON:0002095,3.84e-13,6;UBERON:0004782,3.84e-13,6;UBERON:0003281,3.84e-13,6;UBERON:0009664,3.84e-13,6;UBERON:0002296,3.84e-13,6;UBERON:0005602,3.84e-13,6;UBERON:0001179,3.84e-13,6;UBERON:0006293,3.84e-13,6;UBERON:0002390,5.36e-09,45;UBERON:0003061,5.36e-09,45;UBERON:0002193,2.42e-08,48;UBERON:0002405,2.42e-08,48;UBERON:0003887,6.09e-08,10;UBERON:0001041,7.79e-08,80;UBERON:0004177,3.66e-07,29;UBERON:0005057,3.66e-07,29 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0.0874204024189974,1.33243904726265,1.61980213911861,2.09868563438444,0,0,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0.485510353031154,0.503587271902309,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,1.55871602761721,0.70667914902068,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,2.20841518460394,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.870848794270651,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.512454881139399,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0.617068451549513,0.697601834251224,0.536546802799238,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.205809224758569,0,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0.444756087689741,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.685491075658373,0,0.407302655690628,0.193952487167626,0.280543279561274,0.316182685621286,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0.786235980452812,0.674586337154561,1.21716072833102,1.20588579876208,0.50925170356284,0.575392274901621,1.29708181420028,1.64736847912849,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.169745085775188,1.40814148973101,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0,0,0,0.422190474497091,0.238744688006273,0,0.582961673259701,0,0.512612642393558,0.206386867963223,1.11116716421827,3.57900068308913,4.78429797023588,1.60144721244566,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.524296722128554,0.966336483304024,0.576060012515731,0,0,0.308132871494482,0.25984164595559,0.716106782669926,0.596044064343795,0.841368146639782,1.03382669022204,0.908698049533329,1.295515713135,1.20991422164209,0.487289403698762,0.577271049841977,0.818138315270983,0,0.221985953374065,0.897138566094757,0.839423081820392,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0.44449345560323,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.463537303779422,0.192909220463705,0,0,1.37147700954166,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr4:11129557..11129560,+ | |||
}} |
Latest revision as of 13:30, 4 August 2015
Short description: | p@chr4:11129557..11129560, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:11129557..11129560, + |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 5.14e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.14e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.14e-15 | 3 |
megakaryocyte progenitor cell | 9.33e-08 | 6 |
megakaryocyte | 9.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.84e-13 | 6 |
cavity lining | 3.84e-13 | 6 |
serous membrane | 3.84e-13 | 6 |
gastrointestinal system mesentery | 3.84e-13 | 6 |
stomach region | 3.84e-13 | 6 |
mesentery | 3.84e-13 | 6 |
gastrointestinal system serosa | 3.84e-13 | 6 |
mesentery of stomach | 3.84e-13 | 6 |
gut mesentery | 3.84e-13 | 6 |
dorsal mesentery | 3.84e-13 | 6 |
dorsal mesogastrium | 3.84e-13 | 6 |
peritoneal cavity | 3.84e-13 | 6 |
spleen primordium | 3.84e-13 | 6 |
hematopoietic system | 5.36e-09 | 45 |
blood island | 5.36e-09 | 45 |
hemolymphoid system | 2.42e-08 | 48 |
immune system | 2.42e-08 | 48 |
intraembryonic coelom | 6.09e-08 | 10 |
foregut | 7.79e-08 | 80 |
hemopoietic organ | 3.66e-07 | 29 |
immune organ | 3.66e-07 | 29 |