FFCP PHASE1:Mm9::chr11:99293600..99293613,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:99293600..99293613,-|id=chr11:99293600..99293613,-|ontology_enrichment_celltype=CL:0000239!2.14e-12!6;CL:0000677!2.14e-12!6;CL:0000212!2.14e-12!6;CL:0000584!2.14e-12!6;CL:0000075!1.64e-10!7;CL:0002563!5.35e-08!9;CL:0002251!5.35e-08!9;CL:0000066!5.71e-08!25;CL:0002076!1.31e-07!15;CL:0000473!3.04e-07!3;CL:0000627!3.04e-07!3;CL:0000682!3.04e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.53e-11,3;CL:0000239,6.49e-10,6;CL:0000677,6.49e-10,6;CL:0000584,6.49e-10,6;CL:0000075,1.63e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.13e-29!43;UBERON:0005409!3.58e-27!59;UBERON:0000344!4.02e-19!15;UBERON:0001242!3.78e-15!13;UBERON:0000060!3.78e-15!13;UBERON:0001262!3.78e-15!13;UBERON:0004786!3.78e-15!13;UBERON:0001007!2.36e-14!128;UBERON:0001555!2.36e-14!128;UBERON:0007026!2.36e-14!128;UBERON:0004119!5.33e-14!130;UBERON:0000925!5.33e-14!130;UBERON:0006595!5.33e-14!130;UBERON:0004921!2.41e-12!126;UBERON:0004185!2.41e-12!126;UBERON:0004923!7.44e-11!24;UBERON:0003350!5.35e-08!9;UBERON:0004808!5.35e-08!9;UBERON:0001277!5.35e-08!9;UBERON:0000331!2.39e-07!3;UBERON:0002116!2.39e-07!3;UBERON:0001204!2.39e-07!3;UBERON:0001168!2.39e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-28,31;UBERON:0000344,1.21e-23,15;UBERON:0005409,3.36e-20,47;UBERON:0001242,2.70e-17,13;UBERON:0001262,2.70e-17,13;UBERON:0004786,2.70e-17,13;UBERON:0002108,3.73e-15,4;UBERON:0004923,3.70e-14,24;UBERON:0000331,1.00e-11,3;UBERON:0002116,1.00e-11,3;UBERON:0001204,1.00e-11,3;UBERON:0001168,1.00e-11,3;UBERON:0001007,1.34e-09,116;UBERON:0001555,1.34e-09,116;UBERON:0007026,1.34e-09,116;UBERON:0004119,2.24e-09,118;UBERON:0000925,2.24e-09,118;UBERON:0006595,2.24e-09,118;UBERON:0001962,4.80e-09,2;UBERON:0001961,4.80e-09,2;UBERON:0001744,4.80e-09,2;UBERON:0001155,2.73e-08,2;UBERON:0000059,2.73e-08,2;UBERON:0004921,1.91e-07,114|phase1_expression=0,1.74487703819681,0.454999239389536,2.41971369045464,1.00179145989269,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,3.21172993494038,1.14846392823004,1.29228598847722,3.878482188346,5.89072600314759,1.26015064879965,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.17340679996253,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,2.37264530772256,0.329397909448022,0.251335208800269,0,0.38992817423824,3.59527763461689,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674321731924103,0.0826534557253359,0.523511883968059,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:99293600..99293613,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:99293600..99293613,- | |||
|description=CAGE_peak_at_chr11:99293600..99293613,- | |||
|id=chr11:99293600..99293613,- | |||
|ontology_enrichment_celltype=CL:0000239!2.14e-12!6;CL:0000677!2.14e-12!6;CL:0000212!2.14e-12!6;CL:0000584!2.14e-12!6;CL:0000075!1.64e-10!7;CL:0002563!5.35e-08!9;CL:0002251!5.35e-08!9;CL:0000066!5.71e-08!25;CL:0002076!1.31e-07!15;CL:0000473!3.04e-07!3;CL:0000627!3.04e-07!3;CL:0000682!3.04e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.53e-11,3;CL:0000239,6.49e-10,6;CL:0000677,6.49e-10,6;CL:0000584,6.49e-10,6;CL:0000075,1.63e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.13e-29!43;UBERON:0005409!3.58e-27!59;UBERON:0000344!4.02e-19!15;UBERON:0001242!3.78e-15!13;UBERON:0000060!3.78e-15!13;UBERON:0001262!3.78e-15!13;UBERON:0004786!3.78e-15!13;UBERON:0001007!2.36e-14!128;UBERON:0001555!2.36e-14!128;UBERON:0007026!2.36e-14!128;UBERON:0004119!5.33e-14!130;UBERON:0000925!5.33e-14!130;UBERON:0006595!5.33e-14!130;UBERON:0004921!2.41e-12!126;UBERON:0004185!2.41e-12!126;UBERON:0004923!7.44e-11!24;UBERON:0003350!5.35e-08!9;UBERON:0004808!5.35e-08!9;UBERON:0001277!5.35e-08!9;UBERON:0000331!2.39e-07!3;UBERON:0002116!2.39e-07!3;UBERON:0001204!2.39e-07!3;UBERON:0001168!2.39e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-28,31;UBERON:0000344,1.21e-23,15;UBERON:0005409,3.36e-20,47;UBERON:0001242,2.70e-17,13;UBERON:0001262,2.70e-17,13;UBERON:0004786,2.70e-17,13;UBERON:0002108,3.73e-15,4;UBERON:0004923,3.70e-14,24;UBERON:0000331,1.00e-11,3;UBERON:0002116,1.00e-11,3;UBERON:0001204,1.00e-11,3;UBERON:0001168,1.00e-11,3;UBERON:0001007,1.34e-09,116;UBERON:0001555,1.34e-09,116;UBERON:0007026,1.34e-09,116;UBERON:0004119,2.24e-09,118;UBERON:0000925,2.24e-09,118;UBERON:0006595,2.24e-09,118;UBERON:0001962,4.80e-09,2;UBERON:0001961,4.80e-09,2;UBERON:0001744,4.80e-09,2;UBERON:0001155,2.73e-08,2;UBERON:0000059,2.73e-08,2;UBERON:0004921,1.91e-07,114 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,2.41971369045464,1.00179145989269,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,3.21172993494038,1.14846392823004,1.29228598847722,3.878482188346,5.89072600314759,1.26015064879965,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.17340679996253,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,2.37264530772256,0.329397909448022,0.251335208800269,0,0.38992817423824,3.59527763461689,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674321731924103,0.0826534557253359,0.523511883968059,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:99293600..99293613,- | |||
}} |
Latest revision as of 13:25, 4 August 2015
Short description: | p@chr11:99293600..99293613, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:99293600..99293613, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.53e-11 | 3 |
brush border epithelial cell | 6.49e-10 | 6 |
gut absorptive cell | 6.49e-10 | 6 |
enterocyte | 6.49e-10 | 6 |
columnar/cuboidal epithelial cell | 1.63e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.13e-28 | 31 |
mucosa | 1.21e-23 | 15 |
gastrointestinal system | 3.36e-20 | 47 |
intestinal mucosa | 2.70e-17 | 13 |
wall of intestine | 2.70e-17 | 13 |
gastrointestinal system mucosa | 2.70e-17 | 13 |
small intestine | 3.73e-15 | 4 |
organ component layer | 3.70e-14 | 24 |
ileal mucosa | 1.00e-11 | 3 |
ileum | 1.00e-11 | 3 |
mucosa of small intestine | 1.00e-11 | 3 |
wall of small intestine | 1.00e-11 | 3 |
digestive system | 1.34e-09 | 116 |
digestive tract | 1.34e-09 | 116 |
primitive gut | 1.34e-09 | 116 |
endoderm-derived structure | 2.24e-09 | 118 |
endoderm | 2.24e-09 | 118 |
presumptive endoderm | 2.24e-09 | 118 |
gut-associated lymphoid tissue | 4.80e-09 | 2 |
mucosa-associated lymphoid tissue | 4.80e-09 | 2 |
lymphoid tissue | 4.80e-09 | 2 |
colon | 2.73e-08 | 2 |
large intestine | 2.73e-08 | 2 |
subdivision of digestive tract | 1.91e-07 | 114 |