FFCP PHASE1:Hg19::chr8:57353745..57353754,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57353745..57353754,- | |||
|id=chr8:57353745..57353754,- | |||
|ontology_enrichment_celltype=CL:0000667!5.85e-22!6;CL:0000058!5.85e-22!6;CL:0000138!5.85e-22!6;CL:0000153!2.19e-20!9;CL:0000447!2.19e-20!9;CL:0000327!6.81e-13!14;CL:0000499!4.06e-11!27;CL:0000135!7.04e-08!3;CL:0000386!7.04e-08!3;CL:0000388!7.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.62e-41;6!CL:0000153;2.12e-27;9!CL:0000447;2.12e-27;9!CL:0000327;1.31e-16;15!CL:0000499;1.21e-13;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.04e-40,6;CL:0000138,1.04e-40,6;CL:0000153,2.60e-27,9;CL:0000447,2.60e-27,9;CL:0000327,1.48e-16,15;CL:0000499,1.21e-13,28;CL:0000151,4.64e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.72e-17;1!UBERON:0003852;4.72e-17;1!UBERON:0010122;4.52e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.71e-09;2!DOID:3193;4.52e-09;2!DOID:962;4.52e-09;2!DOID:171;4.73e-07;10!DOID:3095;6.82e-07;22!DOID:2994;6.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.71e-09,2;DOID:3193,5.08e-09,2;DOID:962,5.08e-09,2;DOID:171,5.26e-07,10;DOID:3095,7.32e-07,22;DOID:2994,7.32e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000369!6.68e-21!4;UBERON:0002435!6.68e-21!4;UBERON:0000204!6.68e-21!4;UBERON:0010082!6.68e-21!4;UBERON:0009663!1.99e-18!7;UBERON:0005383!1.28e-16!3;UBERON:0005382!1.28e-16!3;UBERON:0002308!2.78e-14!9;UBERON:0002420!2.78e-14!9;UBERON:0000125!2.78e-14!9;UBERON:0007245!2.78e-14!9;UBERON:0010009!2.78e-14!9;UBERON:0010011!2.78e-14!9;UBERON:0000454!2.78e-14!9;UBERON:0001873!1.12e-11!2;UBERON:0010122!1.12e-11!2;UBERON:0000043!7.04e-08!3;UBERON:0005705!7.49e-07!1;UBERON:0008193!7.49e-07!1;UBERON:0002514!7.49e-07!1;UBERON:0003462!7.49e-07!1;UBERON:0008001!7.49e-07!1;UBERON:0007914!7.49e-07!1;UBERON:0003457!7.49e-07!1;UBERON:0009292!7.49e-07!1;UBERON:0007375!7.49e-07!1;UBERON:0003323!7.49e-07!1;UBERON:0002397!7.49e-07!1;UBERON:0001709!7.49e-07!1;UBERON:0004066!7.49e-07!1;UBERON:0002244!7.49e-07!1;UBERON:0005620!7.49e-07!1;UBERON:0004068!7.49e-07!1;UBERON:0004362!7.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;2.53e-21;3!UBERON:0005382;2.53e-21;3!UBERON:0009663;3.55e-20;7!UBERON:0005705;4.72e-17;1!UBERON:0008193;4.72e-17;1!UBERON:0010912;4.72e-17;1!UBERON:0002514;4.72e-17;1!UBERON:0003457;4.72e-17;1!UBERON:0008907;4.72e-17;1!UBERON:0008001;4.72e-17;1!UBERON:0007213;4.72e-17;1!UBERON:0009891;4.72e-17;1!UBERON:0007914;4.72e-17;1!UBERON:0007375;4.72e-17;1!UBERON:0003323;4.72e-17;1!UBERON:0010258;4.72e-17;1!UBERON:0005253;4.72e-17;1!UBERON:0007842;4.72e-17;1!UBERON:0002397;4.72e-17;1!UBERON:0003113;4.72e-17;1!UBERON:0003277;4.72e-17;1!UBERON:0001709;4.72e-17;1!UBERON:0002244;4.72e-17;1!UBERON:0005620;4.72e-17;1!UBERON:0010364;4.72e-17;1!UBERON:0004288;4.72e-17;1!UBERON:0001874;1.93e-16;1!UBERON:0000369;2.96e-16;4!UBERON:0002435;2.96e-16;4!UBERON:0000204;2.96e-16;4!UBERON:0002420;7.56e-16;9!UBERON:0000125;7.56e-16;9!UBERON:0007245;7.56e-16;9!UBERON:0002308;7.56e-16;9!UBERON:0010009;7.56e-16;9!UBERON:0010011;7.56e-16;9!UBERON:0000454;7.56e-16;9!UBERON:0004089;3.43e-09;2!UBERON:0001873;4.52e-09;2!UBERON:0003714;4.52e-09;2!UBERON:0001875;6.93e-09;2!UBERON:0006514;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,2.41e-21,3;UBERON:0005382,2.41e-21,3;UBERON:0009663,3.02e-20,7;UBERON:0005705,4.72e-17,1;UBERON:0008193,4.72e-17,1;UBERON:0010912,4.72e-17,1;UBERON:0002514,4.72e-17,1;UBERON:0003457,4.72e-17,1;UBERON:0008907,4.72e-17,1;UBERON:0008001,4.72e-17,1;UBERON:0007213,4.72e-17,1;UBERON:0009891,4.72e-17,1;UBERON:0007914,4.72e-17,1;UBERON:0009292,4.72e-17,1;UBERON:0003099,4.72e-17,1;UBERON:0007375,4.72e-17,1;UBERON:0003323,4.72e-17,1;UBERON:0010258,4.72e-17,1;UBERON:0007842,4.72e-17,1;UBERON:0009494,4.72e-17,1;UBERON:0010042,4.72e-17,1;UBERON:0010045,4.72e-17,1;UBERON:0010259,4.72e-17,1;UBERON:0010359,4.72e-17,1;UBERON:0009526,4.72e-17,1;UBERON:0002397,4.72e-17,1;UBERON:0003113,4.72e-17,1;UBERON:0003277,4.72e-17,1;UBERON:0001709,4.72e-17,1;UBERON:0004066,4.72e-17,1;UBERON:0002244,4.72e-17,1;UBERON:0005620,4.72e-17,1;UBERON:0004362,4.72e-17,1;UBERON:0010364,4.72e-17,1;UBERON:0010046,4.72e-17,1;UBERON:0005868,4.72e-17,1;UBERON:0007238,4.72e-17,1;UBERON:0004288,4.72e-17,1;UBERON:0004068,4.72e-17,1;UBERON:0010334,4.72e-17,1;UBERON:0003852,4.72e-17,1;UBERON:0010253,4.72e-17,1;UBERON:0001874,1.93e-16,1;UBERON:0000369,2.85e-16,4;UBERON:0002435,2.85e-16,4;UBERON:0000204,2.85e-16,4;UBERON:0010082,2.85e-16,4;UBERON:0002420,6.66e-16,9;UBERON:0000125,6.66e-16,9;UBERON:0007245,6.66e-16,9;UBERON:0002308,6.66e-16,9;UBERON:0010009,6.66e-16,9;UBERON:0010011,6.66e-16,9;UBERON:0000454,6.66e-16,9;UBERON:0005253,3.43e-09,2;UBERON:0004089,3.43e-09,2;UBERON:0001873,4.34e-09,2;UBERON:0010122,4.34e-09,2;UBERON:0003714,5.08e-09,2;UBERON:0001875,5.94e-09,2;UBERON:0006514,5.94e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,1.01392563272577,2.3858578411533,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.964771509003264,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06287460050841,0,2.23457967189298,0,0,0,11.2856301981019,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.79062257427272,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.85997509083376,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7921684686082,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:57353745..57353754,- | |||
}} |
Revision as of 22:07, 22 January 2014
Short description: | p@chr8:57353745..57353754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57353745..57353754, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.04e-40 | 6 |
chondrocyte | 1.04e-40 | 6 |
GAG secreting cell | 2.60e-27 | 9 |
carbohydrate secreting cell | 2.60e-27 | 9 |
extracellular matrix secreting cell | 1.48e-16 | 15 |
stromal cell | 1.21e-13 | 28 |
secretory cell | 4.64e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.71e-09 | 2 |
peripheral nerve sheath neoplasm | 5.08e-09 | 2 |
neurofibroma | 5.08e-09 | 2 |
neuroectodermal tumor | 5.26e-07 | 10 |
germ cell and embryonal cancer | 7.32e-07 | 22 |
germ cell cancer | 7.32e-07 | 22 |