FFCP PHASE1:Hg19::chr8:24774895..24774913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7734 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UK51 | |||
|association_with_transcript=215bp_to_AF181990_5end | |||
|coexpression_cluster_id=C261 | |||
|description=CAGE_peak_13_at_NEFM_5end | |||
|id=chr8:24774895..24774913,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.34e-19;3!UBERON:0003057;8.34e-19;3!UBERON:0006601;1.47e-17;82!UBERON:0006222;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.04e-93!57;UBERON:0005068!2.04e-93!57;UBERON:0006241!2.04e-93!57;UBERON:0007135!2.04e-93!57;UBERON:0001017!5.43e-77!82;UBERON:0002616!6.68e-77!59;UBERON:0005743!5.41e-76!86;UBERON:0002780!2.91e-71!41;UBERON:0001890!2.91e-71!41;UBERON:0006240!2.91e-71!41;UBERON:0000073!1.23e-70!94;UBERON:0001016!1.23e-70!94;UBERON:0000955!3.48e-70!69;UBERON:0006238!3.48e-70!69;UBERON:0003080!2.18e-69!42;UBERON:0003075!4.10e-67!86;UBERON:0007284!4.10e-67!86;UBERON:0002346!1.26e-63!90;UBERON:0002020!4.97e-62!34;UBERON:0003528!4.97e-62!34;UBERON:0001893!3.82e-61!34;UBERON:0002791!1.68e-58!33;UBERON:0001869!3.64e-56!32;UBERON:0003056!4.78e-51!61;UBERON:0002619!3.07e-49!22;UBERON:0000956!3.40e-47!25;UBERON:0000203!3.40e-47!25;UBERON:0007023!1.08e-43!115;UBERON:0001950!2.49e-43!20;UBERON:0000033!8.81e-41!123;UBERON:0000153!2.29e-38!129;UBERON:0007811!2.29e-38!129;UBERON:0004121!1.70e-37!169;UBERON:0000924!2.39e-36!173;UBERON:0006601!2.39e-36!173;UBERON:0003076!9.14e-24!15;UBERON:0003057!9.14e-24!15;UBERON:0000025!4.33e-22!194;UBERON:0002298!3.22e-19!8;UBERON:0000200!1.33e-18!6;UBERON:0001871!1.71e-18!7;UBERON:0004733!4.96e-16!12;UBERON:0002028!4.96e-16!12;UBERON:0007277!4.96e-16!12;UBERON:0002308!6.23e-16!9;UBERON:0000125!6.23e-16!9;UBERON:0000349!7.37e-16!5;UBERON:0002420!1.10e-15!9;UBERON:0007245!1.10e-15!9;UBERON:0010009!1.10e-15!9;UBERON:0010011!1.10e-15!9;UBERON:0000454!1.10e-15!9;UBERON:0004111!1.49e-15!241;UBERON:0004732!1.12e-14!13;UBERON:0000483!2.45e-13!309;UBERON:0000119!4.31e-13!312;UBERON:0000477!5.80e-13!286;UBERON:0001894!2.99e-11!7;UBERON:0006222!2.99e-11!7;UBERON:0000064!4.00e-11!219;UBERON:0000475!8.09e-11!365;UBERON:0000988!1.17e-10!3;UBERON:0001896!1.41e-10!3;UBERON:0002771!1.41e-10!3;UBERON:0005290!1.41e-10!3;UBERON:0010096!1.41e-10!3;UBERON:0009663!1.96e-10!7;UBERON:0006331!1.99e-10!3;UBERON:0001872!2.69e-10!5;UBERON:0002240!2.97e-10!3;UBERON:0002021!4.03e-10!5;UBERON:0002680!1.08e-08!9;UBERON:0001895!1.08e-08!9;UBERON:0010092!1.08e-08!9;UBERON:0002148!8.65e-08!2;UBERON:0009662!8.65e-08!2;UBERON:0001954!1.08e-07!2;UBERON:0003022!1.08e-07!2;UBERON:0002421!1.08e-07!2;UBERON:0002600!1.08e-07!2;UBERON:0001876!1.91e-07!2;UBERON:0001905!1.97e-07!2;UBERON:0002757!1.97e-07!2;UBERON:0010134!1.97e-07!2;UBERON:0002784!1.97e-07!2;UBERON:0005408!1.97e-07!2;UBERON:0001899!1.97e-07!2;UBERON:0001897!2.30e-07!2;UBERON:0000369!4.57e-07!4;UBERON:0002435!4.57e-07!4;UBERON:0000204!4.57e-07!4;UBERON:0010082!4.57e-07!4;UBERON:0001870!5.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.19e-45;53!UBERON:0002616;9.19e-45;53!UBERON:0002619;1.12e-42;22!UBERON:0003528;1.07e-39;34!UBERON:0002020;1.07e-39;34!UBERON:0002780;2.61e-39;41!UBERON:0001890;2.61e-39;41!UBERON:0000956;1.85e-37;25!UBERON:0000203;1.85e-37;25!UBERON:0002298;3.90e-37;6!UBERON:0002791;1.23e-34;32!UBERON:0001869;1.28e-34;32!UBERON:0001950;2.32e-33;20!UBERON:0001893;6.02e-32;34!UBERON:0001017;7.52e-28;75!UBERON:0002784;1.29e-24;4!UBERON:0004733;1.81e-24;12!UBERON:0002028;1.81e-24;12!UBERON:0000955;3.08e-24;68!UBERON:0001016;2.76e-23;83!UBERON:0004732;1.60e-22;13!UBERON:0001894;1.73e-21;7!UBERON:0000349;5.24e-20;5!UBERON:0000988;1.43e-19;3!UBERON:0001896;2.29e-19;3!UBERON:0005290;2.29e-19;3!UBERON:0002240;8.34e-19;3!UBERON:0005174;8.34e-19;3!UBERON:0001137;8.34e-19;3!UBERON:0000200;9.84e-17;6!UBERON:0001871;3.28e-14;6!UBERON:0002148;6.66e-14;2!UBERON:0006331;6.66e-14;2!UBERON:0009662;6.66e-14;2!UBERON:0001954;1.29e-13;2!UBERON:0003022;1.29e-13;2!UBERON:0002421;1.29e-13;2!UBERON:0002600;1.29e-13;2!UBERON:0002702;2.13e-13;2!UBERON:0002771;2.26e-13;2!UBERON:0001905;2.81e-13;2!UBERON:0002757;2.81e-13;2!UBERON:0010134;2.81e-13;2!UBERON:0005408;2.81e-13;2!UBERON:0001899;2.81e-13;2!UBERON:0001876;4.07e-13;2!UBERON:0001897;4.07e-13;2!UBERON:0010225;4.07e-13;2!UBERON:0007023;1.80e-12;114!UBERON:0001872;1.37e-11;5!UBERON:0002680;3.53e-11;9!UBERON:0000125;3.53e-11;9!UBERON:0002308;3.53e-11;9!UBERON:0001895;3.53e-11;9!UBERON:0002420;7.58e-11;9!UBERON:0007245;7.58e-11;9!UBERON:0010009;7.58e-11;9!UBERON:0010011;7.58e-11;9!UBERON:0000454;7.58e-11;9!UBERON:0001870;3.18e-09;3!UBERON:0011216;5.21e-09;132!UBERON:0003112;9.70e-08;1!UBERON:0011158;9.70e-08;1!UBERON:0003128;9.70e-08;1!UBERON:0001703;9.70e-08;1!UBERON:0002241;9.70e-08;1!UBERON:0010314;3.51e-07;132!UBERON:0003296;4.63e-07;4!UBERON:0010133;4.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.33e-91,56;UBERON:0005068,4.33e-91,56;UBERON:0006241,4.33e-91,56;UBERON:0007135,4.33e-91,56;UBERON:0000073,1.86e-77,53;UBERON:0002616,1.86e-77,53;UBERON:0001017,1.10e-69,81;UBERON:0000955,3.47e-63,68;UBERON:0006238,3.47e-63,68;UBERON:0001016,2.39e-62,89;UBERON:0003075,6.36e-61,82;UBERON:0007284,6.36e-61,82;UBERON:0002346,7.03e-58,86;UBERON:0002780,7.20e-54,41;UBERON:0001890,7.20e-54,41;UBERON:0003080,7.20e-54,41;UBERON:0006240,7.20e-54,41;UBERON:0003528,2.82e-47,34;UBERON:0002020,2.82e-47,34;UBERON:0010371,4.75e-47,104;UBERON:0007023,5.78e-46,114;UBERON:0002619,9.91e-43,22;UBERON:0003076,3.28e-39,15;UBERON:0003057,3.28e-39,15;UBERON:0010314,7.74e-39,132;UBERON:0002791,1.17e-38,32;UBERON:0001869,1.17e-38,32;UBERON:0000956,1.67e-37,25;UBERON:0000203,1.67e-37,25;UBERON:0002298,3.34e-37,6;UBERON:0001893,2.83e-36,34;UBERON:0003056,3.64e-35,61;UBERON:0001950,2.32e-33,20;UBERON:0004121,2.06e-30,171;UBERON:0000924,2.06e-30,171;UBERON:0006601,2.06e-30,171;UBERON:0004733,1.60e-24,12;UBERON:0002028,1.60e-24,12;UBERON:0007277,1.60e-24,12;UBERON:0002784,1.76e-24,4;UBERON:0011216,8.52e-24,223;UBERON:0000025,3.96e-23,192;UBERON:0004732,1.43e-22,13;UBERON:0001894,2.01e-21,7;UBERON:0006222,2.01e-21,7;UBERON:0000349,3.63e-20,5;UBERON:0000988,1.39e-19,3;UBERON:0001896,2.02e-19,3;UBERON:0005290,2.02e-19,3;UBERON:0010096,2.02e-19,3;UBERON:0002240,8.87e-19,3;UBERON:0005174,8.87e-19,3;UBERON:0001137,8.87e-19,3;UBERON:0004111,2.03e-17,240;UBERON:0000200,9.84e-17,6;UBERON:0001871,3.11e-14,6;UBERON:0002148,6.67e-14,2;UBERON:0006331,6.67e-14,2;UBERON:0009662,6.67e-14,2;UBERON:0001954,1.04e-13,2;UBERON:0003022,1.04e-13,2;UBERON:0002421,1.04e-13,2;UBERON:0002600,1.04e-13,2;UBERON:0002702,1.82e-13,2;UBERON:0002771,2.64e-13,2;UBERON:0001876,3.18e-13,2;UBERON:0001905,3.39e-13,2;UBERON:0002757,3.39e-13,2;UBERON:0010134,3.39e-13,2;UBERON:0005408,3.39e-13,2;UBERON:0001899,3.39e-13,2;UBERON:0001897,4.60e-13,2;UBERON:0010225,4.60e-13,2;UBERON:0000483,1.82e-12,306;UBERON:0000119,2.73e-12,309;UBERON:0001872,1.55e-11,5;UBERON:0002680,3.40e-11,9;UBERON:0001895,3.40e-11,9;UBERON:0010092,3.40e-11,9;UBERON:0000125,3.78e-11,9;UBERON:0002308,3.78e-11,9;UBERON:0002420,7.29e-11,9;UBERON:0007245,7.29e-11,9;UBERON:0010009,7.29e-11,9;UBERON:0010011,7.29e-11,9;UBERON:0000454,7.29e-11,9;UBERON:0001870,2.87e-09,3;UBERON:0003112,1.03e-07,1;UBERON:0011158,1.03e-07,1;UBERON:0003128,1.03e-07,1;UBERON:0001703,1.03e-07,1;UBERON:0002241,1.03e-07,1;UBERON:0004761,1.03e-07,1;UBERON:0009617,1.03e-07,1;UBERON:0003296,5.07e-07,4;UBERON:0010133,5.07e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,3.79807424308384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85536196323703,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,1.4471572635049,1.52581736317083,0.663475559587348,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.57690890297873,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01191833562385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,8.98942480336399,0.160753148465019,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.4157583958568,7.9339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.07444650333337,14.1465751698345,6.88091034828085,4.76994921608465,4.71932662354514,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2728098705662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,4.25089728976755,10.2165669796577,0.41023272848151,0,0.276629009856872,8.2352579272244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,3.12431239445539,16.5349437200947,1.07806877329642,0,0,0,0,0,3.21421101526972,4.03540466662589,0,0,0,0,0,3.33051691586475,0.460409414939944,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,8.2449556188277,2.0793248022896,2.5359343655004,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,4.13731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p13@NEFM | |||
}} |
Revision as of 21:16, 22 January 2014
Short description: | p13@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NEFM_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | 215bp_to_AF181990_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | Q9UK51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data