FFCP PHASE1:Hg19::chr8:24774653..24774683,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7734 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UK51 | |||
|association_with_transcript=0bp_to_AF181990_5end | |||
|coexpression_cluster_id=C261 | |||
|description=CAGE_peak_9_at_NEFM_5end | |||
|id=chr8:24774653..24774683,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.44e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.13e-18;82!UBERON:0010122;1.94e-10;2!UBERON:0006241;9.34e-08;3!UBERON:0003057;9.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.74e-86!57;UBERON:0005068!7.74e-86!57;UBERON:0006241!7.74e-86!57;UBERON:0007135!7.74e-86!57;UBERON:0001017!8.63e-72!82;UBERON:0002616!3.75e-71!59;UBERON:0005743!1.67e-70!86;UBERON:0000073!1.41e-67!94;UBERON:0001016!1.41e-67!94;UBERON:0000955!3.28e-67!69;UBERON:0006238!3.28e-67!69;UBERON:0002780!4.20e-65!41;UBERON:0001890!4.20e-65!41;UBERON:0006240!4.20e-65!41;UBERON:0003080!2.46e-63!42;UBERON:0003075!4.10e-60!86;UBERON:0007284!4.10e-60!86;UBERON:0002020!5.38e-58!34;UBERON:0003528!5.38e-58!34;UBERON:0001893!2.63e-57!34;UBERON:0002346!7.81e-57!90;UBERON:0002791!4.69e-55!33;UBERON:0001869!2.60e-53!32;UBERON:0007023!6.19e-52!115;UBERON:0003056!1.64e-45!61;UBERON:0002619!2.68e-44!22;UBERON:0001950!1.73e-39!20;UBERON:0000033!5.59e-39!123;UBERON:0000956!1.94e-38!25;UBERON:0000203!1.94e-38!25;UBERON:0004121!4.61e-37!169;UBERON:0000153!1.56e-36!129;UBERON:0007811!1.56e-36!129;UBERON:0000924!7.46e-36!173;UBERON:0006601!7.46e-36!173;UBERON:0003076!2.14e-22!15;UBERON:0003057!2.14e-22!15;UBERON:0002308!3.62e-21!9;UBERON:0000125!3.62e-21!9;UBERON:0002420!9.17e-21!9;UBERON:0007245!9.17e-21!9;UBERON:0010009!9.17e-21!9;UBERON:0010011!9.17e-21!9;UBERON:0000454!9.17e-21!9;UBERON:0000025!5.05e-20!194;UBERON:0004111!9.36e-17!241;UBERON:0009663!2.97e-16!7;UBERON:0004733!5.77e-16!12;UBERON:0002028!5.77e-16!12;UBERON:0007277!5.77e-16!12;UBERON:0000200!1.52e-15!6;UBERON:0002298!1.64e-15!8;UBERON:0001871!4.11e-15!7;UBERON:0004732!1.40e-14!13;UBERON:0000349!5.29e-13!5;UBERON:0001872!6.13e-13!5;UBERON:0000477!9.93e-13!286;UBERON:0000483!4.59e-12!309;UBERON:0000119!8.22e-12!312;UBERON:0000475!1.38e-11!365;UBERON:0000064!2.14e-11!219;UBERON:0000369!3.79e-10!4;UBERON:0002435!3.79e-10!4;UBERON:0000204!3.79e-10!4;UBERON:0010082!3.79e-10!4;UBERON:0002680!9.99e-10!9;UBERON:0001895!9.99e-10!9;UBERON:0010092!9.99e-10!9;UBERON:0001894!3.49e-09!7;UBERON:0006222!3.49e-09!7;UBERON:0000062!4.72e-09!511;UBERON:0000988!5.04e-09!3;UBERON:0002771!5.30e-09!3;UBERON:0000922!1.14e-08!612;UBERON:0001896!1.20e-08!3;UBERON:0005290!1.20e-08!3;UBERON:0010096!1.20e-08!3;UBERON:0006331!1.43e-08!3;UBERON:0002240!1.66e-08!3;UBERON:0002021!1.84e-08!5;UBERON:0005383!3.82e-08!3;UBERON:0005382!3.82e-08!3;UBERON:0000468!3.34e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.61e-54;32!UBERON:0003528;1.00e-53;34!UBERON:0002020;1.00e-53;34!UBERON:0002619;4.33e-52;22!UBERON:0001893;6.57e-51;34!UBERON:0002780;7.74e-51;41!UBERON:0001890;7.74e-51;41!UBERON:0002791;1.71e-50;32!UBERON:0000073;3.18e-49;53!UBERON:0002616;3.18e-49;53!UBERON:0000956;1.16e-45;25!UBERON:0000203;1.16e-45;25!UBERON:0001950;1.72e-43;20!UBERON:0001017;1.57e-33;75!UBERON:0000955;4.59e-32;68!UBERON:0002298;3.05e-30;6!UBERON:0001016;4.73e-25;83!UBERON:0000200;4.03e-21;6!UBERON:0002784;5.65e-20;4!UBERON:0004733;9.56e-20;12!UBERON:0002028;9.56e-20;12!UBERON:0000125;3.91e-19;9!UBERON:0002308;3.91e-19;9!UBERON:0002420;1.57e-18;9!UBERON:0007245;1.57e-18;9!UBERON:0010009;1.57e-18;9!UBERON:0010011;1.57e-18;9!UBERON:0000454;1.57e-18;9!UBERON:0004732;3.72e-18;13!UBERON:0001894;1.89e-17;7!UBERON:0000988;2.24e-16;3!UBERON:0000349;3.27e-16;5!UBERON:0001872;4.06e-16;5!UBERON:0001870;1.16e-15;3!UBERON:0001896;1.18e-15;3!UBERON:0005290;1.18e-15;3!UBERON:0007023;4.01e-15;114!UBERON:0005383;1.05e-14;3!UBERON:0005382;1.05e-14;3!UBERON:0002148;1.30e-11;2!UBERON:0006331;1.30e-11;2!UBERON:0009662;1.30e-11;2!UBERON:0001871;1.31e-11;6!UBERON:0002702;2.06e-11;2!UBERON:0001954;2.59e-11;2!UBERON:0003022;2.59e-11;2!UBERON:0002421;2.59e-11;2!UBERON:0002600;2.59e-11;2!UBERON:0002771;2.66e-11;2!UBERON:0000369;3.66e-11;4!UBERON:0002435;3.66e-11;4!UBERON:0000204;3.66e-11;4!UBERON:0001897;5.12e-11;2!UBERON:0010225;5.12e-11;2!UBERON:0009663;5.19e-11;7!UBERON:0011216;5.27e-11;132!UBERON:0001905;1.05e-10;2!UBERON:0002757;1.05e-10;2!UBERON:0010134;1.05e-10;2!UBERON:0005408;1.05e-10;2!UBERON:0001899;1.05e-10;2!UBERON:0001876;1.16e-10;2!UBERON:0001873;1.94e-10;2!UBERON:0002021;1.01e-09;5!UBERON:0002680;3.21e-09;9!UBERON:0001895;3.21e-09;9!UBERON:0010314;3.96e-08;132!UBERON:0002240;9.34e-08;3!UBERON:0005174;9.34e-08;3!UBERON:0001137;9.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.33e-99,56;UBERON:0005068,1.33e-99,56;UBERON:0006241,1.33e-99,56;UBERON:0007135,1.33e-99,56;UBERON:0000073,4.90e-93,53;UBERON:0002616,4.90e-93,53;UBERON:0000955,1.54e-79,68;UBERON:0006238,1.54e-79,68;UBERON:0001017,5.45e-79,81;UBERON:0002780,1.92e-73,41;UBERON:0001890,1.92e-73,41;UBERON:0003080,1.92e-73,41;UBERON:0006240,1.92e-73,41;UBERON:0001016,1.44e-70,89;UBERON:0003075,3.11e-66,82;UBERON:0007284,3.11e-66,82;UBERON:0003528,1.06e-63,34;UBERON:0002020,1.06e-63,34;UBERON:0002346,7.23e-63,86;UBERON:0001869,4.28e-61,32;UBERON:0001893,2.50e-57,34;UBERON:0002791,2.79e-55,32;UBERON:0002619,3.65e-52,22;UBERON:0010371,6.85e-51,104;UBERON:0007023,2.61e-49,114;UBERON:0003056,7.09e-48,61;UBERON:0000956,1.00e-45,25;UBERON:0000203,1.00e-45,25;UBERON:0001950,1.51e-43,20;UBERON:0010314,2.32e-41,132;UBERON:0004121,6.59e-34,171;UBERON:0000924,6.59e-34,171;UBERON:0006601,6.59e-34,171;UBERON:0002298,3.05e-30,6;UBERON:0011216,1.22e-27,223;UBERON:0003076,9.09e-26,15;UBERON:0003057,9.09e-26,15;UBERON:0000025,1.89e-24,192;UBERON:0000200,3.87e-21,6;UBERON:0002784,6.72e-20,4;UBERON:0004733,9.43e-20,12;UBERON:0002028,9.43e-20,12;UBERON:0007277,9.43e-20,12;UBERON:0000125,4.67e-19,9;UBERON:0002308,4.67e-19,9;UBERON:0002420,1.62e-18,9;UBERON:0007245,1.62e-18,9;UBERON:0010009,1.62e-18,9;UBERON:0010011,1.62e-18,9;UBERON:0000454,1.62e-18,9;UBERON:0004732,3.67e-18,13;UBERON:0004111,3.77e-18,240;UBERON:0001894,2.17e-17,7;UBERON:0006222,2.17e-17,7;UBERON:0000988,2.18e-16,3;UBERON:0000349,2.58e-16,5;UBERON:0001872,3.40e-16,5;UBERON:0001896,1.22e-15,3;UBERON:0005290,1.22e-15,3;UBERON:0010096,1.22e-15,3;UBERON:0001870,1.41e-15,3;UBERON:0005383,1.21e-14,3;UBERON:0005382,1.21e-14,3;UBERON:0000483,1.08e-12,306;UBERON:0000119,1.69e-12,309;UBERON:0001871,1.09e-11,6;UBERON:0002148,1.26e-11,2;UBERON:0006331,1.26e-11,2;UBERON:0009662,1.26e-11,2;UBERON:0002702,2.11e-11,2;UBERON:0002771,2.46e-11,2;UBERON:0001954,2.46e-11,2;UBERON:0003022,2.46e-11,2;UBERON:0002421,2.46e-11,2;UBERON:0002600,2.46e-11,2;UBERON:0000369,4.07e-11,4;UBERON:0002435,4.07e-11,4;UBERON:0000204,4.07e-11,4;UBERON:0010082,4.07e-11,4;UBERON:0001897,4.75e-11,2;UBERON:0010225,4.75e-11,2;UBERON:0009663,6.09e-11,7;UBERON:0001876,9.09e-11,2;UBERON:0001905,1.35e-10,2;UBERON:0002757,1.35e-10,2;UBERON:0010134,1.35e-10,2;UBERON:0005408,1.35e-10,2;UBERON:0001899,1.35e-10,2;UBERON:0001873,2.09e-10,2;UBERON:0010122,2.09e-10,2;UBERON:0002021,1.11e-09,5;UBERON:0002680,3.14e-09,9;UBERON:0001895,3.14e-09,9;UBERON:0010092,3.14e-09,9;UBERON:0002240,9.34e-08,3;UBERON:0005174,9.34e-08,3;UBERON:0001137,9.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.348581828608555,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,5.48610724001,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,2.41197055220813,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.20596438625408,1.52581736317083,0.774054819518572,0.295547618953547,3.51016635446356,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,3.04543779442941,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,1.35588444468319,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.19048606227189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,8.44461117891769,0.160753148465019,0,0,0,0,0.850493793212345,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,57.7894814936131,9.65297992721637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,4.88105059607853,20.781694497279,4.0138643698305,6.43388498913743,4.84351942942791,0.276697269872462,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1762370297525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.706521476061055,7.08482881627925,13.0899764426864,2.2562800066483,0,0.345786262321089,12.7565760049162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,10.15401528198,18.3951248886054,1.96589011601111,1.64092442705466,0,0,0,0,1.07140367175657,6.38939072215766,0,0,0,0,0,7.13682196256733,0.72350050919134,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,10.796965691322,0.891139200981258,4.6492130034174,0.339854229375634,0,0,0,0,0,0,0,0,0.573358332605805,0,0.679914901909147,1.74540276136151,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.267964130156178,9.12086383404657,2.68925789240928,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@NEFM | |||
}} |
Revision as of 21:15, 22 January 2014
Short description: | p9@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEFM_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | 0bp_to_AF181990_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | Q9UK51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data