FFCP PHASE1:Hg19::chr7:44365216..44365266,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1461 | |||
|TSSclassifier=strong | |||
|UniProt=A4D2J9,Q13554,A4D2K5 | |||
|association_with_transcript=0bp_to_ENST00000358707,ENST00000440254,ENST00000457475,NM_001220,NM_172078,NM_172079,NM_172080,NM_172081,NM_172082,NM_172083,NM_172084,uc003tkp.2,uc003tkq.2,uc003tkr.2,uc003tks.2,uc003tkt.2,uc003tku.2,uc003tkv.2,uc003tkw.2,uc003tkx.2,uc010kyc.2,uc010kyd.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CAMK2B_5end | |||
|id=chr7:44365216..44365266,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.89e-19;82!UBERON:0006215;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.75e-51!115;UBERON:0001049!2.03e-48!57;UBERON:0005068!2.03e-48!57;UBERON:0006241!2.03e-48!57;UBERON:0007135!2.03e-48!57;UBERON:0001017!2.36e-48!82;UBERON:0005743!4.04e-48!86;UBERON:0000073!1.55e-45!94;UBERON:0001016!1.55e-45!94;UBERON:0000955!4.90e-42!69;UBERON:0006238!4.90e-42!69;UBERON:0003075!1.38e-41!86;UBERON:0007284!1.38e-41!86;UBERON:0002616!3.83e-40!59;UBERON:0002346!6.60e-40!90;UBERON:0002780!1.88e-39!41;UBERON:0001890!1.88e-39!41;UBERON:0006240!1.88e-39!41;UBERON:0003080!3.78e-38!42;UBERON:0001893!1.56e-32!34;UBERON:0002020!2.36e-32!34;UBERON:0003528!2.36e-32!34;UBERON:0002791!2.29e-31!33;UBERON:0001869!9.64e-31!32;UBERON:0003056!3.29e-28!61;UBERON:0004121!1.24e-27!169;UBERON:0000924!4.15e-27!173;UBERON:0006601!4.15e-27!173;UBERON:0002619!6.80e-27!22;UBERON:0001950!1.19e-24!20;UBERON:0000153!3.02e-24!129;UBERON:0007811!3.02e-24!129;UBERON:0000033!1.20e-23!123;UBERON:0000956!1.09e-22!25;UBERON:0000203!1.09e-22!25;UBERON:0000025!1.76e-12!194;UBERON:0002420!2.04e-11!9;UBERON:0007245!2.04e-11!9;UBERON:0010009!2.04e-11!9;UBERON:0010011!2.04e-11!9;UBERON:0000454!2.04e-11!9;UBERON:0003076!3.44e-11!15;UBERON:0003057!3.44e-11!15;UBERON:0002308!3.77e-11!9;UBERON:0000125!3.77e-11!9;UBERON:0001871!5.30e-10!7;UBERON:0000483!6.20e-10!309;UBERON:0004111!9.33e-10!241;UBERON:0000119!1.36e-09!312;UBERON:0009663!2.76e-09!7;UBERON:0000064!3.40e-09!219;UBERON:0004733!1.10e-08!12;UBERON:0002028!1.10e-08!12;UBERON:0007277!1.10e-08!12;UBERON:0000481!1.71e-08!347;UBERON:0001894!3.05e-08!7;UBERON:0006222!3.05e-08!7;UBERON:0000200!3.35e-08!6;UBERON:0000062!7.79e-08!511;UBERON:0004732!8.60e-08!13;UBERON:0000922!1.56e-07!612;UBERON:0000477!2.02e-07!286;UBERON:0002021!2.73e-07!5;UBERON:0001872!3.24e-07!5;UBERON:0000349!3.57e-07!5;UBERON:0000923!5.34e-07!604;UBERON:0005291!5.34e-07!604;UBERON:0006598!5.34e-07!604;UBERON:0002532!5.34e-07!604;UBERON:0002050!6.36e-07!605;UBERON:0005423!6.36e-07!605;UBERON:0000475!6.64e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.80e-48;41!UBERON:0001890;6.80e-48;41!UBERON:0001869;7.51e-47;32!UBERON:0001893;1.18e-46;34!UBERON:0003528;1.47e-46;34!UBERON:0002020;1.47e-46;34!UBERON:0002791;1.95e-46;32!UBERON:0002619;1.80e-44;22!UBERON:0000073;2.92e-43;53!UBERON:0002616;2.92e-43;53!UBERON:0001950;1.17e-40;20!UBERON:0000956;1.87e-38;25!UBERON:0000203;1.87e-38;25!UBERON:0000955;4.88e-31;68!UBERON:0001017;5.51e-29;75!UBERON:0001016;3.26e-25;83!UBERON:0002420;2.93e-18;9!UBERON:0007245;2.93e-18;9!UBERON:0010009;2.93e-18;9!UBERON:0010011;2.93e-18;9!UBERON:0000454;2.93e-18;9!UBERON:0000125;8.58e-18;9!UBERON:0002308;8.58e-18;9!UBERON:0009663;1.20e-14;7!UBERON:0007023;2.52e-14;114!UBERON:0001871;4.35e-14;6!UBERON:0000200;7.98e-13;6!UBERON:0001894;9.28e-13;7!UBERON:0004733;2.93e-12;12!UBERON:0002028;2.93e-12;12!UBERON:0002021;3.02e-11;5!UBERON:0004732;3.66e-11;13!UBERON:0001872;4.24e-11;5!UBERON:0000349;4.60e-11;5!UBERON:0002298;6.65e-11;6!UBERON:0011216;4.86e-10;132!UBERON:0000369;8.66e-10;4!UBERON:0002435;8.66e-10;4!UBERON:0000204;8.66e-10;4!UBERON:0010314;1.12e-08;132!UBERON:0002680;3.57e-08;9!UBERON:0001895;3.57e-08;9!UBERON:0002784;4.94e-08;4!UBERON:0003296;9.55e-08;4!UBERON:0010133;9.55e-08;4!UBERON:0005383;9.59e-08;3!UBERON:0005382;9.59e-08;3!UBERON:0001870;3.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.19e-82,56;UBERON:0005068,1.19e-82,56;UBERON:0006241,1.19e-82,56;UBERON:0007135,1.19e-82,56;UBERON:0000073,6.23e-78,53;UBERON:0002616,6.23e-78,53;UBERON:0001017,2.14e-75,81;UBERON:0001016,9.94e-69,89;UBERON:0000955,3.93e-68,68;UBERON:0006238,3.93e-68,68;UBERON:0002780,5.33e-67,41;UBERON:0001890,5.33e-67,41;UBERON:0003080,5.33e-67,41;UBERON:0006240,5.33e-67,41;UBERON:0003075,3.40e-63,82;UBERON:0007284,3.40e-63,82;UBERON:0002346,1.71e-59,86;UBERON:0001893,3.26e-55,34;UBERON:0003528,6.61e-55,34;UBERON:0002020,6.61e-55,34;UBERON:0007023,1.13e-53,114;UBERON:0001869,3.61e-52,32;UBERON:0010371,7.32e-52,104;UBERON:0002791,1.35e-51,32;UBERON:0003056,5.38e-48,61;UBERON:0010314,1.75e-44,132;UBERON:0002619,1.90e-44,22;UBERON:0001950,1.22e-40,20;UBERON:0004121,1.91e-40,171;UBERON:0000924,1.91e-40,171;UBERON:0006601,1.91e-40,171;UBERON:0000956,1.96e-38,25;UBERON:0000203,1.96e-38,25;UBERON:0011216,7.77e-29,223;UBERON:0000025,6.69e-23,192;UBERON:0002420,3.35e-18,9;UBERON:0007245,3.35e-18,9;UBERON:0010009,3.35e-18,9;UBERON:0010011,3.35e-18,9;UBERON:0000454,3.35e-18,9;UBERON:0000125,9.49e-18,9;UBERON:0002308,9.49e-18,9;UBERON:0004111,1.46e-16,240;UBERON:0003076,1.98e-16,15;UBERON:0003057,1.98e-16,15;UBERON:0000483,6.32e-16,306;UBERON:0000119,1.37e-15,309;UBERON:0009663,1.33e-14,7;UBERON:0001871,4.53e-14,6;UBERON:0001894,7.62e-13,7;UBERON:0006222,7.62e-13,7;UBERON:0000200,8.93e-13,6;UBERON:0004733,2.91e-12,12;UBERON:0002028,2.91e-12,12;UBERON:0007277,2.91e-12,12;UBERON:0002021,3.05e-11,5;UBERON:0004732,3.64e-11,13;UBERON:0001872,4.07e-11,5;UBERON:0000349,4.80e-11,5;UBERON:0002298,6.66e-11,6;UBERON:0000369,8.66e-10,4;UBERON:0002435,8.66e-10,4;UBERON:0000204,8.66e-10,4;UBERON:0010082,8.66e-10,4;UBERON:0000923,2.21e-08,560;UBERON:0010316,2.21e-08,560;UBERON:0005291,2.21e-08,560;UBERON:0006598,2.21e-08,560;UBERON:0010317,2.21e-08,560;UBERON:0002532,2.21e-08,560;UBERON:0002680,3.55e-08,9;UBERON:0001895,3.55e-08,9;UBERON:0010092,3.55e-08,9;UBERON:0002050,3.62e-08,564;UBERON:0000922,3.69e-08,592;UBERON:0002784,4.21e-08,4;UBERON:0003296,8.79e-08,4;UBERON:0010133,8.79e-08,4;UBERON:0005423,9.27e-08,581;UBERON:0005383,9.60e-08,3;UBERON:0005382,9.60e-08,3;UBERON:0001870,3.53e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,6.50699269288109,3.86644406388848,8.20829700138309,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.849523652246594,0,0,0,1.18785872333055,0,16.9005100120271,8.15882615180974,0,0,0,0.19924798825107,0,6.04638594850262,0,0.123084805461069,0,1.70749867179921,0,0,0,0,0,24.2333186523805,10.2972588959655,47.9073115202866,0.7812832832557,0,0,0,0,0,3.44743373241465,1.16641845353302,0.868124974666461,30.1152071176705,18.330658671062,30.5163472634166,38.0392654163413,31.328047609076,10.3111136662367,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0.939797545549098,4.65067817566672,5.61804353109152,20.3810067781045,0,0.19566461893209,0.242780379534093,0.394584402849391,2.41981432097328,18.9765112210904,0.252746318513952,0.60129367765797,0.207376382794494,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,4.29363407483012,0.137041924646751,0,14.8780370496315,0,0,0,0,1.15272333723285,0.572682980829578,3.43189995723929,0,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0,0,24.0168115483916,4.38097212454378,0,0,1.31443677139657,3.0721064139948,6.64565229633883,0.717873024576814,6.19004901546872,13.3060074922337,10.2658870423261,6.78553072115935,0,0,0,0,0,0,0,26.242579763707,8.17220436669454,0,0,0,0,0.77380195455795,15.8556342877444,0,0,0.157363764404994,0,0,0,10.7204298956005,11.2555634962123,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0.146552233678082,1.32506888912221,6.33486486171598,4.62814106099415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8352954193727,14.0330204637258,10.01527445652,1.72022758707021,4.21530395840039,4.03626619118992,0.138348634936231,0,0,0,0,1.87333962322753,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,1.96997725189636,0,0,0.530067437837643,0.38582807654183,0,0.256241518587947,0,0,8.84853991371077,0,0,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,5.37156359475337,0.107824811396682,0,0.873677105536111,0.169732529954025,0,0,0,0,0,6.40456598628376,0,0,27.4901083412847,14.1696576325585,7.98169295285756,20.3065200598347,35.2900374710405,20.954647496658,10.4959169660703,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,18.1676102623482,15.6215619722769,11.5744606040663,14.5856363445986,16.9562190795648,0,3.47347824872506,0,0,7.49982570229601,6.72567444437648,2.42786241694653,2.73194629621557,0,0.115233987555779,0,9.10794421889545,19.0083315596634,0,0.111231401892069,0.156986185701028,35.9794700907644,0,0.913158720509496,0,2.8665101273223,2.07281978112303,2.52821778772363,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0.955538938977433,0,0,0,14.2434344181337,10.1636178787685,4.6392577253528,1.45713297917742,0,0,0.237840181555137,0,1.09940516745429,12.6808788596006,0.231522474323834,0.218559560503957,2.82190377816914,0,0.471353094203252,5.30032861210352,2.97046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0.458729283404541,2.00675416412032,0.157771562193185,17.3378299986832,21.3811838266785,1.0580536810308,0,0,0,0,0,0,0,0,0.18378979906969,0,0.303114792872958,0.803892390468535,5.80418607621146,3.93045384275202,4.26467963801962,1.42838658878244,0.0645889098360061,0,0,0.509177266225319,5.2550469129137,3.04803447055746,3.76456631193809,0.404112318087525,0.0717222053926763,1.33064142618405,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | |||
|short_description=p2@CAMK2B | |||
}} |
Revision as of 16:48, 22 January 2014
Short description: | p2@CAMK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMK2B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000358707, ENST00000440254, ENST00000457475, NM_001220, NM_172078, NM_172079, NM_172080, NM_172081, NM_172082, NM_172083, NM_172084, uc003tkp.2, uc003tkq.2, uc003tkr.2, uc003tks.2, uc003tkt.2, uc003tku.2, uc003tkv.2, uc003tkw.2, uc003tkx.2, uc010kyc.2, uc010kyd.2_5end |
EntrezGene: | CAMK2B |
HGNC: | 1461 |
UniProt: | A4D2J9Q13554A4D2K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data