FFCP PHASE1:Hg19::chr7:27153269..27153285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-269bp_to_ENST00000522193_5end | |||
|coexpression_cluster_id=C4677 | |||
|description=CAGE_peak_3_at_ENST00000522193_5end | |||
|id=chr7:27153269..27153285,+ | |||
|ontology_enrichment_celltype=CL:0000076!2.70e-09!62;CL:0000222!5.09e-08!119;CL:0000077!6.88e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.34e-09;19!CL:0002591;4.52e-09;1!CL:0002188;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.47e-09,19;CL:0002591,4.52e-09,1;CL:0000213,5.91e-09,58;CL:0000215,5.91e-09,58;CL:0002188,6.08e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.67e-07!14;DOID:305!3.39e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3347;5.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.70e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002100!4.60e-16!216;UBERON:0003104!2.92e-14!238;UBERON:0009142!2.92e-14!238;UBERON:0005177!1.85e-13!107;UBERON:0003064!9.53e-13!37;UBERON:0003886!5.02e-11!63;UBERON:0005256!7.05e-11!143;UBERON:0006554!1.04e-10!44;UBERON:0000466!1.31e-10!126;UBERON:0001008!2.70e-10!45;UBERON:0009569!1.06e-09!113;UBERON:0004921!2.07e-09!129;UBERON:0004185!2.07e-09!129;UBERON:0000464!2.42e-09!104;UBERON:0000489!2.61e-09!32;UBERON:0002553!6.07e-09!70;UBERON:0000926!1.61e-08!448;UBERON:0004120!1.61e-08!448;UBERON:0006603!1.61e-08!448;UBERON:0002417!1.64e-08!61;UBERON:0000916!1.64e-08!61;UBERON:0005172!5.13e-08!55;UBERON:0005173!5.13e-08!55;UBERON:0000481!6.82e-08!347;UBERON:0001007!6.88e-08!155;UBERON:0001555!6.88e-08!155;UBERON:0007026!6.88e-08!155;UBERON:0003914!1.11e-07!118;UBERON:0006555!2.82e-07!17;UBERON:0005103!2.82e-07!17;UBERON:0000083!2.82e-07!17;UBERON:0009201!2.82e-07!17;UBERON:0004819!2.82e-07!17;UBERON:0006553!2.82e-07!17;UBERON:0003074!2.82e-07!17;UBERON:0003060!2.82e-07!17;UBERON:0002113!4.18e-07!27;UBERON:0003918!4.18e-07!27;UBERON:0005095!4.18e-07!27;UBERON:0007687!4.18e-07!27;UBERON:0000077!4.64e-07!130;UBERON:0005156!5.80e-07!59;UBERON:0000990!5.80e-07!59;UBERON:0000490!6.42e-07!138;UBERON:0004876!6.72e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.17e-08;1!UBERON:0000997;1.17e-08;1!UBERON:0005056;1.17e-08;1!UBERON:0004176;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005103,4.83e-09,8;UBERON:0000083,4.83e-09,8;UBERON:0009201,4.83e-09,8;UBERON:0006553,4.83e-09,8;UBERON:0003074,4.83e-09,8;UBERON:0003060,4.83e-09,8;UBERON:0001301,6.65e-09,1;UBERON:0000997,1.91e-08,1;UBERON:0005056,1.91e-08,1;UBERON:0000080,4.34e-08,9;UBERON:0002120,4.34e-08,9;UBERON:0004875,4.34e-08,9;UBERON:0005721,4.34e-08,9;UBERON:0005754,4.34e-08,9;UBERON:0007297,4.34e-08,9;UBERON:0006555,1.09e-07,16;UBERON:0004819,1.09e-07,16;UBERON:0002113,5.27e-07,26;UBERON:0003918,5.27e-07,26;UBERON:0011143,5.27e-07,26;UBERON:0005095,5.27e-07,26;UBERON:0007687,5.27e-07,26 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0,0.22452937262617,1.35133776579987,0,0,0.916008719652036,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,1.59956785891291,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.768834895534206,0,0.160853921143607,0,0,0,0.246381468041427,0,0.464841513839837,0,0.200506470303285,0.184161977871793,0.114814448164607,0.728364672026868,1.04899531967539,0,0.15403067420883,0,1.46139224653261,0.211103257785751,1.13733384070897,0.680374821106063,0.215915916102139,6.16909010761157,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.308097234229289,0.307007349452259,0.137836572484531,0,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0.141405431953713,3.39024349860728,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0.728341138602278,0,0,0,0,0.60129367765797,0.311064574191741,0.664653872707185,0.992975867626496,0.313932918407225,0,0.284609546029793,0,0,1.07791637155815,0.174118413160805,1.7472666824203,0,0,0.0730893170861856,0,0.969890164884194,0,0,0,0,0,0,0.240476460754601,0.426905989478705,0.799238438328521,0,0.114536596165916,0,0.14405479798815,0.49701014226173,3.06402245001834,0,0,0.203996435272644,0.288950589901519,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0.394028536495991,1.15400093896996,0,0.179287339332845,0.191915197319445,0,0,0,1.08599920350743,0,0,1.19730191562487,0,0.681552087141687,4.64579575232515,0.146552233678082,0,0.258565912723101,0,0,9.86741031243341,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0.124980407962107,0.303298235083296,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,0.450772826991655,0.380805212168795,0,0,0.859284456339908,0,0,0,0,0,0,0,1.07220795687463,0,1.13352962756136,0.694567422971502,0.244736704506468,0,0,5.04353314031026,0.353378291891762,0.771656153083659,0.168942440653073,0,0,1.21543982470953,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.471878893390961,0.183428598521679,0.346576998451015,0,2.0710797781803,0,0.601682626794058,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,3.83287282918786,0,0,0,0,0,0,0,0,0,0.590969204419841,0.111231401892069,0.39246546425257,0,0.280272163313789,0,0,0,0,0,0.697448552208751,0,1.60342272946051,0,0,0,0,0.236664001461131,0.340853619036631,0,0.9164274741762,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.308696632431779,1.09279780251979,0,0.490296643507811,0,0.392616934229891,0.891139200981258,0,0.339854229375634,0,0,0,0.357107877211315,0,0.320965466756673,0.730336388246517,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0.275684698604535,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.732629417498771,0,0,0.179650404213174,0,0.366724332548599,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p3@ENST00000522193 | |||
}} |
Revision as of 16:11, 22 January 2014
Short description: | p3@ENST00000522193 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000522193_5end |
Coexpression cluster: | C4677_lung_mesothelioma_Renal_liposarcoma_pharyngeal_Nucleus_Endothelial |
Association with transcript: | -269bp_to_ENST00000522193_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.47e-09 | 19 |
smooth muscle cell of the pulmonary artery | 4.52e-09 | 1 |
lining cell | 5.91e-09 | 58 |
barrier cell | 5.91e-09 | 58 |
glomerular endothelial cell | 6.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesonephric epithelium | 4.83e-09 | 8 |
mesonephric tubule | 4.83e-09 | 8 |
nephric duct | 4.83e-09 | 8 |
renal duct | 4.83e-09 | 8 |
mesonephric duct | 4.83e-09 | 8 |
pronephric duct | 4.83e-09 | 8 |
epididymis | 6.65e-09 | 1 |
mammalian vulva | 1.91e-08 | 1 |
external female genitalia | 1.91e-08 | 1 |
mesonephros | 4.34e-08 | 9 |
pronephros | 4.34e-08 | 9 |
nephrogenic cord | 4.34e-08 | 9 |
pronephric mesoderm | 4.34e-08 | 9 |
rostral part of nephrogenic cord | 4.34e-08 | 9 |
presumptive pronephric mesoderm | 4.34e-08 | 9 |
excretory tube | 1.09e-07 | 16 |
kidney epithelium | 1.09e-07 | 16 |
kidney | 5.27e-07 | 26 |
kidney mesenchyme | 5.27e-07 | 26 |
upper urinary tract | 5.27e-07 | 26 |
kidney rudiment | 5.27e-07 | 26 |
kidney field | 5.27e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.70e-09 | 1 |