FFCP PHASE1:Hg19::chr6:138820624..138820654,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=strong | |||
|UniProt=E2QRJ1 | |||
|association_with_transcript=0bp_to_ENST00000343505,ENST00000426841_5end | |||
|coexpression_cluster_id=C4564 | |||
|description=CAGE_peak_5_at_NHSL1_5end | |||
|id=chr6:138820624..138820654,- | |||
|ontology_enrichment_celltype=CL:0000223!3.27e-12!59;CL:0002076!1.09e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.77e-10;12!CL:0000128;1.31e-08;7!CL:0000126;1.31e-08;7!CL:0000127;1.31e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.72e-10,12;CL:0000223,1.12e-09,58;CL:0000128,1.06e-08,7;CL:0000126,1.06e-08,7;CL:0000127,1.06e-08,7;CL:0002453,1.06e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.25e-10;13!UBERON:0004161;1.90e-10;11!UBERON:0003104;1.55e-07;31!CL:0000223;4.13e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.97e-11!86;UBERON:0001017!4.80e-11!82;UBERON:0004121!2.14e-10!169;UBERON:0000924!1.09e-09!173;UBERON:0006601!1.09e-09!173;UBERON:0000033!2.70e-09!123;UBERON:0001049!2.95e-09!57;UBERON:0005068!2.95e-09!57;UBERON:0006241!2.95e-09!57;UBERON:0007135!2.95e-09!57;UBERON:0002365!3.43e-09!31;UBERON:0002330!3.43e-09!31;UBERON:0003075!3.43e-09!86;UBERON:0007284!3.43e-09!86;UBERON:0000062!4.31e-09!511;UBERON:0000153!5.68e-09!129;UBERON:0007811!5.68e-09!129;UBERON:0000475!6.74e-09!365;UBERON:0000073!6.81e-09!94;UBERON:0001016!6.81e-09!94;UBERON:0000481!1.53e-08!347;UBERON:0002616!2.07e-08!59;UBERON:0002346!3.16e-08!90;UBERON:0000955!3.55e-08!69;UBERON:0006238!3.55e-08!69;UBERON:0003056!6.75e-08!61;UBERON:0004921!2.59e-07!129;UBERON:0004185!2.59e-07!129;UBERON:0005172!7.42e-07!55;UBERON:0005173!7.42e-07!55;UBERON:0007023!9.48e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.10e-11;22!UBERON:0004921;1.16e-11;33!UBERON:0002365;1.44e-11;31!UBERON:0002330;1.44e-11;31!UBERON:0000160;2.47e-09;17!UBERON:0002423;7.52e-09;25!UBERON:0002107;9.06e-09;19!UBERON:0006925;9.06e-09;19!UBERON:0001041;8.24e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.96e-13,223;UBERON:0004921,2.60e-12,118;UBERON:0002365,6.50e-12,31;UBERON:0002330,6.50e-12,31;UBERON:0005409,6.32e-10,25;UBERON:0009854,9.83e-10,23;UBERON:0001007,1.25e-09,145;UBERON:0001555,1.25e-09,145;UBERON:0007026,1.25e-09,145;UBERON:0000160,2.30e-09,17;UBERON:0009497,7.47e-09,25;UBERON:0000015,7.47e-09,25;UBERON:0002423,7.47e-09,25;UBERON:0006235,7.47e-09,25;UBERON:0004161,7.47e-09,25;UBERON:0002107,1.01e-08,19;UBERON:0006925,1.01e-08,19;UBERON:0008836,1.01e-08,19;UBERON:0008835,1.11e-08,22;UBERON:0003894,1.11e-08,22;UBERON:0009856,2.85e-08,26;UBERON:0001041,3.10e-08,87;UBERON:0004119,8.00e-08,160;UBERON:0000925,8.00e-08,160;UBERON:0006595,8.00e-08,160;UBERON:0007499,2.50e-07,25;UBERON:0002530,6.46e-07,59 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,1.60057375499824,0,2.19418305034661,3.14859585844162,1.91624195102038,3.51519390865448,12.9902789771517,16.584319068889,12.9872789167571,0,0,0,0,0.6024118375565,1.47901604066715,0.0774672005803016,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,1.30979075497713,9.4716774956061,4.82019775619758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,1.05950199351452,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,15.2106041786197,10.8110993834539,10.0434284135839,0,8.24022538238861,0,8.67027254728142,3.37205259772859,2.41269533787914,1.75918045801206,0,0,0,1.04337364477569,1.29149563659404,0,0,0,0,0,0,0,0,0,0.16798212819886,2.69372684760534,0,0.581267877027924,1.53353071666084,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0,0.76228387266739,2.60279707715243,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0.368323955743585,0.114814448164607,0,0.131124414959424,0.451199612907412,0.616122696835318,0,0,0.527758144464379,0,0,0,0,0,0.501689773854853,5.60727800699084,3.3243040357149,0.895499018888713,0,0,0,0.328014645699706,0,8.86152700170411,0,0,4.59412430396938,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0.534192213880424,0.991709492165869,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0.699869440489966,2.21310859268678,2.68120910214315,3.26672954583968,7.15492885903522,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,1.15415370381156,0.355709216742071,0,0,0.191505370132367,4.02179807175377,1.29848776109822,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,3.12620952643264,0,0,0,0,0,2.24568648489864,0,0,1.78309414843965,0,0,0.296964680832639,0,0,0.562677665642051,0,0,0.211125408127993,0,1.65770349318689,40.0573069088299,1.22722419002586,2.95403533106567,0,0,1.61119057208048,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,2.04123229368278,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,3.67860687561555,8.95735737970654,33.9677047692822,4.888241159469,29.3555917393816,18.6581547809219,19.3180606585092,2.29163852134302,0,0.937057782901357,1.27718352450966,0,0,0.789168805698781,10.8891644443797,0.91821828489147,0.063186579628488,1.65355761355942,0.311064574191741,0,0,0,0,1.13843818411917,0,1.38847790668105,0,0,3.31980669659857,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,0.253243183823515,0,0,5.54977786322317,0,4.17862209746907,0,10.4672948695798,0.14405479798815,0,0,0,0,0,0,0,1.09524303113594,1.27746588066972,0,5.78352179414492,0,0,0,0,0,0,0,0,1.16495949527454,12.0538268930052,13.1041214826055,14.2895512970872,3.6418168160457,7.45125322178903,0,1.49823746722733,0.643012593860077,0.137539436597234,0,1.1248694577575,0,0.242998226632099,0,12.8453302897693,7.65836986770972,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,9.23279072171919,1.32506888912221,0,0.52893040697076,1.53978154095896,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,4.0138643698305,7.09945929835855,2.2354705058898,2.76697269872462,0,0,0,0,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.276516872303462,0,0,0,2.6208787907713,0,0.633936370075881,0.19998739585493,1.38699248602383,0.688859918643263,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,1.26178792002005,0,0,0,0.321146125482298,0,0,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,1.64477330057155,0.992422356778588,0,0,21.4280734351315,121.734707443214,0,0.455324382702595,0.0887023701626388,0.230467975111559,0.171488009437418,0.40781839786099,0.131545547125698,0,0,0.156986185701028,0,1.12108865325516,0,0.215927591218621,0.47775168788705,1.28657779517981,10.42889837436,0,0,0,1.24329698497822,0.17071847709395,0,3.8720462293825,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| |||
|short_description=p5@NHSL1 | |||
}} |
Revision as of 14:14, 22 January 2014
Short description: | p5@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NHSL1_5end |
Coexpression cluster: | C4564_pineal_small_argyrophil_colon_cord_Hepatocyte_B |
Association with transcript: | 0bp_to_ENST00000343505, ENST00000426841_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E2QRJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.72e-10 | 12 |
endodermal cell | 1.12e-09 | 58 |
oligodendrocyte | 1.06e-08 | 7 |
macroglial cell | 1.06e-08 | 7 |
astrocyte | 1.06e-08 | 7 |
oligodendrocyte precursor cell | 1.06e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.96e-13 | 223 |
subdivision of digestive tract | 2.60e-12 | 118 |
exocrine gland | 6.50e-12 | 31 |
exocrine system | 6.50e-12 | 31 |
gastrointestinal system | 6.32e-10 | 25 |
digestive tract diverticulum | 9.83e-10 | 23 |
digestive system | 1.25e-09 | 145 |
digestive tract | 1.25e-09 | 145 |
primitive gut | 1.25e-09 | 145 |
intestine | 2.30e-09 | 17 |
epithelium of foregut-midgut junction | 7.47e-09 | 25 |
anatomical boundary | 7.47e-09 | 25 |
hepatobiliary system | 7.47e-09 | 25 |
foregut-midgut junction | 7.47e-09 | 25 |
septum transversum | 7.47e-09 | 25 |
liver | 1.01e-08 | 19 |
digestive gland | 1.01e-08 | 19 |
liver bud | 1.01e-08 | 19 |
hepatic diverticulum | 1.11e-08 | 22 |
liver primordium | 1.11e-08 | 22 |
sac | 2.85e-08 | 26 |
foregut | 3.10e-08 | 87 |
endoderm-derived structure | 8.00e-08 | 160 |
endoderm | 8.00e-08 | 160 |
presumptive endoderm | 8.00e-08 | 160 |
epithelial sac | 2.50e-07 | 25 |
gland | 6.46e-07 | 59 |