FFCP PHASE1:Hg19::chr6:45917165..45917177,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr6:45917165..45917177,- | |||
|id=chr6:45917165..45917177,- | |||
|ontology_enrichment_celltype=CL:0002541!2.35e-08!3;CL:0000066!4.06e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.56e-30;19!CL:0002541;6.73e-19;3!CL:1000415;3.15e-13;2!CL:0002536;3.90e-13;2!CL:0002537;7.16e-12;5!CL:0002577;5.97e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.65e-30,19;CL:0002541,5.97e-19,3;CL:1000415,3.06e-13,2;CL:0002536,4.40e-13,2;CL:0002537,7.30e-12,5;CL:0002577,6.09e-09,3;CL:0000066,9.73e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:299;3.65e-08;25!DOID:3112;2.09e-07;1!DOID:3111;2.67e-07;1!DOID:3603;2.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.73e-08,25;DOID:3112,1.97e-07,1;DOID:3111,2.84e-07,1;DOID:3603,2.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.65e-20!14;UBERON:0000158!8.65e-20!14;UBERON:0003124!1.59e-12!7;UBERON:0005156!1.70e-10!59;UBERON:0000990!1.70e-10!59;UBERON:0000478!2.45e-10!24;UBERON:0003886!2.52e-09!63;UBERON:0000305!4.53e-09!7;UBERON:0003133!7.32e-09!48;UBERON:0002294!1.85e-08!7;UBERON:0001173!1.85e-08!7;UBERON:0004912!1.85e-08!7;UBERON:0000476!2.35e-08!3;UBERON:0000920!2.35e-08!3;UBERON:0002110!4.53e-08!3;UBERON:0006242!4.53e-08!3;UBERON:0002553!6.86e-08!70;UBERON:0004871!7.33e-08!8;UBERON:0000466!2.02e-07!126;UBERON:0003134!2.17e-07!37;UBERON:0000474!2.17e-07!37;UBERON:0005172!2.96e-07!55;UBERON:0005173!2.96e-07!55;UBERON:0000464!3.75e-07!104;UBERON:0002417!5.27e-07!61;UBERON:0000916!5.27e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.17e-38;10!UBERON:0000158;4.17e-38;10!UBERON:0000478;1.90e-28;24!UBERON:0000305;6.01e-22;7!UBERON:0003124;6.73e-19;3!UBERON:0000920;6.73e-19;3!UBERON:0001987;7.73e-14;4!UBERON:0002110;4.16e-09;3!UBERON:0002294;3.26e-08;7!UBERON:0001173;3.26e-08;7!UBERON:0000474;9.17e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.97e-50,14;UBERON:0000158,2.97e-50,14;UBERON:0003124,2.53e-30,7;UBERON:0000478,1.85e-28,24;UBERON:0000305,6.70e-22,7;UBERON:0004871,3.85e-19,8;UBERON:0000920,5.97e-19,3;UBERON:0001987,7.24e-14,4;UBERON:0004340,7.24e-14,4;UBERON:0004923,7.90e-11,66;UBERON:0000995,8.48e-10,21;UBERON:0005795,2.51e-09,22;UBERON:0003975,2.51e-09,22;UBERON:0002110,4.08e-09,3;UBERON:0006242,4.08e-09,3;UBERON:0004175,3.88e-08,25;UBERON:0003134,4.33e-07,37;UBERON:0000474,4.33e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.42321085702716,2.09340350391728,5.24259293112413,5.01157258634062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.860919069801795,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65741758041988,2.11673205330776,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0,0.219259876645935,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,7.63982351160608,11.8785872333055,17.5081600196562,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,1.97710372524119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,1.1528195219403,0,0.108647371922008,7.65602783356607,2.65633020865401,9.59462596833542,0,0,0,0,0,0,0,0,0,5.06021705293358,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15730770175115,0,4.26590112243973,0.17472666824203,0,0.0967563312890851,0.219267951258557,0,0,0,0.225980740780532,0,0,0,13.884148174171,3.60714691131902,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.94081976099493,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,5.81655928868764,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,45.4616173714843,1.30497145982606,0,0,0,0,1.85280868296583,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,5.56824519534329,0.443568258651136,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,1.68534503309014,0,0,0,0,0.118193840883968,0,0.078493092850514,0,2.5224494698241,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2881983755549,0,0,0.111855431797792,0.294450700845729,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:45917165..45917177,- | |||
}} |
Revision as of 12:10, 22 January 2014
Short description: | p@chr6:45917165..45917177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:45917165..45917177, - |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.65e-30 | 19 |
chorionic membrane mesenchymal stem cell | 5.97e-19 | 3 |
epithelial cell of gall bladder | 3.06e-13 | 2 |
amniotic epithelial cell | 4.40e-13 | 2 |
amnion mesenchymal stem cell | 7.30e-12 | 5 |
placental epithelial cell | 6.09e-09 | 3 |
epithelial cell | 9.73e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.97e-50 | 14 |
membranous layer | 2.97e-50 | 14 |
chorion | 2.53e-30 | 7 |
extraembryonic structure | 1.85e-28 | 24 |
amnion | 6.70e-22 | 7 |
somatic layer of lateral plate mesoderm | 3.85e-19 | 8 |
egg chorion | 5.97e-19 | 3 |
placenta | 7.24e-14 | 4 |
allantois | 7.24e-14 | 4 |
organ component layer | 7.90e-11 | 66 |
uterus | 8.48e-10 | 21 |
embryonic uterus | 2.51e-09 | 22 |
internal female genitalia | 2.51e-09 | 22 |
gallbladder | 4.08e-09 | 3 |
gall bladder primordium | 4.08e-09 | 3 |
internal genitalia | 3.88e-08 | 25 |
female reproductive organ | 4.33e-07 | 37 |
female reproductive system | 4.33e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.73e-08 | 25 |
papillary adenocarcinoma | 1.97e-07 | 1 |
cystadenocarcinoma | 2.84e-07 | 1 |
mucinous cystadenocarcinoma | 2.84e-07 | 1 |