FFCP PHASE1:Hg19::chr4:118247051..118247056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2774 | |||
|description=CAGE_peak_at_chr4:118247051..118247056,+ | |||
|id=chr4:118247051..118247056,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.13e-13!254;CL:1000507!3.25e-10!12;CL:1000494!3.25e-10!12;CL:1000497!2.06e-09!18;CL:0002518!2.06e-09!18;CL:1000449!4.03e-07!16;CL:0000075!8.56e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.59e-15;10!CL:1000494;9.59e-15;10!CL:1000497;1.70e-11;17!CL:0002518;1.70e-11;17!CL:1000449;1.25e-09;15!CL:0002166;5.65e-07;3!CL:0000239;6.27e-07;3!CL:1000615;6.27e-07;3!CL:0002306;6.27e-07;3!CL:0002621;9.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.80e-15,10;CL:1000494,8.80e-15,10;CL:1000497,1.63e-11,17;CL:0002518,1.63e-11,17;CL:1000449,1.18e-09,15;CL:0000066,2.53e-09,253;CL:0000239,6.18e-07,3;CL:1000615,6.18e-07,3;CL:0002166,6.18e-07,3;CL:0002306,6.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!8.39e-21!27;DOID:2394!6.44e-19!14;DOID:193!6.52e-19!29;DOID:14566!7.90e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.60e-35;14!DOID:120;1.49e-32;27!DOID:193;4.58e-30;29!DOID:4468;9.83e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.42e-35,14;DOID:120,1.17e-32,27;DOID:193,3.66e-30,29;DOID:4468,1.36e-09,2;DOID:162,2.88e-07,235;DOID:14566,5.38e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.28e-11!13;UBERON:0003100!9.37e-11!41;UBERON:0009773!3.25e-10!12;UBERON:0001231!3.25e-10!12;UBERON:0004810!3.25e-10!12;UBERON:0003134!8.96e-10!37;UBERON:0000474!8.96e-10!37;UBERON:0000058!7.26e-08!26;UBERON:0007625!1.16e-07!11;UBERON:0005156!1.85e-07!59;UBERON:0000990!1.85e-07!59;UBERON:0002119!2.40e-07!4;UBERON:0004531!2.40e-07!4;UBERON:0004211!4.03e-07!16;UBERON:0001285!4.03e-07!16;UBERON:0007684!4.03e-07!16;UBERON:0003220!4.03e-07!16;UBERON:0004208!4.03e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.00e-15;13!UBERON:0004211;9.59e-15;10!UBERON:0009773;9.59e-15;10!UBERON:0001231;9.59e-15;10!UBERON:0004810;9.59e-15;10!UBERON:0002119;4.53e-10;4!UBERON:0006555;1.25e-09;15!UBERON:0004819;1.25e-09;15!UBERON:0001285;1.25e-09;15!UBERON:0007684;1.25e-09;15!UBERON:0000991;4.43e-09;21!UBERON:0002118;1.55e-08;5!UBERON:0000489;2.84e-08;29!UBERON:0003134;3.30e-08;33!UBERON:0006554;5.89e-08;30!UBERON:0001008;5.89e-08;30!UBERON:0002113;7.23e-08;24!UBERON:0011143;7.23e-08;24!UBERON:0003100;2.36e-07;41!UBERON:0006853;6.27e-07;3!UBERON:0007685;6.27e-07;3!UBERON:0004134;6.27e-07;3!UBERON:0001949;9.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,2.55e-15,13;UBERON:0004810,8.80e-15,10;UBERON:0002119,3.20e-10,4;UBERON:0004211,1.18e-09,15;UBERON:0009773,1.18e-09,15;UBERON:0001231,1.18e-09,15;UBERON:0001285,1.18e-09,15;UBERON:0007684,1.18e-09,15;UBERON:0004208,1.18e-09,15;UBERON:0000991,4.02e-09,21;UBERON:0009196,4.02e-09,21;UBERON:0009117,4.02e-09,21;UBERON:0005564,4.02e-09,21;UBERON:0006555,5.18e-09,16;UBERON:0004819,5.18e-09,16;UBERON:0004176,1.15e-08,22;UBERON:0002118,1.45e-08,5;UBERON:0003100,1.47e-08,41;UBERON:0003134,7.49e-08,37;UBERON:0000474,7.49e-08,37;UBERON:0000489,1.15e-07,31;UBERON:0006554,2.71e-07,47;UBERON:0002113,3.35e-07,26;UBERON:0003918,3.35e-07,26;UBERON:0011143,3.35e-07,26;UBERON:0005095,3.35e-07,26;UBERON:0007687,3.35e-07,26;UBERON:0001008,4.19e-07,48;UBERON:0006853,6.18e-07,3;UBERON:0007685,6.18e-07,3;UBERON:0004134,6.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.886917589850256,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,3.81844568827169,0.860413786167011,0.365921118388786,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,9.74296343553385,2.1266264586358,0.53735113621709,1.74380363108377,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,4.91232519879556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,5.01266175758212,0.276242966807689,0,0,0,1.35359883872224,1.46329140498388,0,1.46139224653261,2.74434235121477,0,0,0,0,0.541892875087706,0.501689773854853,3.82314409567557,0.831076008928724,4.02974558499921,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0.0852266274161009,2.1367688555217,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38753981696674,0,0,0,0,0,5.12020043105367,0,0,0,0,0,8.48830064767885,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,3.4278889713421,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0.554698692052555,0,0,4.44001953560053,0,0.343972064943233,0,0,0,0,0,0,1.78154502040776,0,0,0,6.33254679987116,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0.77380195455795,0,0.335434687599266,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,2.39460383124975,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75226443880073,2.69881867298163,2.94999618064893,0.414706207840855,6.64604286394987,2.60872530905867,2.70463696194993,3.80805212168795,4.47557806525128,0.181848659202559,2.7926744831047,0,3.58286299828754,0,0,0,0,0.192619830407303,0,0,0,6.25110680674352,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.785181748008205,0.11796972334774,0,0,0.762764190934334,0,0,0,1.21023041222112,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00208033030965,0,0,0.236387681767936,1.4460082245969,0,0,0,0,0.863710364874486,6.21077194253165,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0.93061915699296,0,1.11855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,4.58763333230399,0.962896400270019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,3.66314708749385,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:118247051..118247056,+ | |||
}} |
Revision as of 02:52, 22 January 2014
Short description: | p@chr4:118247051..118247056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:118247051..118247056, + |
Coexpression cluster: | C2774_anaplastic_Mallassezderived_astrocytoma_gall_mesenchymal_alveolar_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.80e-15 | 10 |
nephron tubule epithelial cell | 8.80e-15 | 10 |
kidney cell | 1.63e-11 | 17 |
kidney epithelial cell | 1.63e-11 | 17 |
epithelial cell of nephron | 1.18e-09 | 15 |
epithelial cell | 2.53e-09 | 253 |
brush border epithelial cell | 6.18e-07 | 3 |
kidney cortex tubule cell | 6.18e-07 | 3 |
epithelial cell of Malassez | 6.18e-07 | 3 |
epithelial cell of proximal tubule | 6.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female gonad | 2.55e-15 | 13 |
nephron tubule epithelium | 8.80e-15 | 10 |
left ovary | 3.20e-10 | 4 |
nephron epithelium | 1.18e-09 | 15 |
renal tubule | 1.18e-09 | 15 |
nephron tubule | 1.18e-09 | 15 |
nephron | 1.18e-09 | 15 |
uriniferous tubule | 1.18e-09 | 15 |
nephrogenic mesenchyme | 1.18e-09 | 15 |
gonad | 4.02e-09 | 21 |
indifferent external genitalia | 4.02e-09 | 21 |
indifferent gonad | 4.02e-09 | 21 |
gonad primordium | 4.02e-09 | 21 |
excretory tube | 5.18e-09 | 16 |
kidney epithelium | 5.18e-09 | 16 |
external genitalia | 1.15e-08 | 22 |
right ovary | 1.45e-08 | 5 |
female organism | 1.47e-08 | 41 |
female reproductive organ | 7.49e-08 | 37 |
female reproductive system | 7.49e-08 | 37 |
cavitated compound organ | 1.15e-07 | 31 |
urinary system structure | 2.71e-07 | 47 |
kidney | 3.35e-07 | 26 |
kidney mesenchyme | 3.35e-07 | 26 |
upper urinary tract | 3.35e-07 | 26 |
kidney rudiment | 3.35e-07 | 26 |
kidney field | 3.35e-07 | 26 |
renal system | 4.19e-07 | 48 |
renal cortex tubule | 6.18e-07 | 3 |
region of nephron tubule | 6.18e-07 | 3 |
proximal tubule | 6.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.42e-35 | 14 |
female reproductive organ cancer | 1.17e-32 | 27 |
reproductive organ cancer | 3.66e-30 | 29 |
clear cell adenocarcinoma | 1.36e-09 | 2 |
cancer | 2.88e-07 | 235 |
disease of cellular proliferation | 5.38e-07 | 239 |