FFCP PHASE1:Hg19::chr4:26344754..26344772,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |||
|TSSclassifier=strong | |||
|UniProt=D6RA45 | |||
|association_with_transcript=0bp_to_ENST00000515573_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_10_at_RBPJ_5end | |||
|id=chr4:26344754..26344772,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.11e-24;82!UBERON:0006241;1.40e-14;3!UBERON:0003057;1.40e-14;3!UBERON:0010122;3.77e-10;2!UBERON:0002532;8.99e-08;206!UBERON:0010316;8.99e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.71e-108!57;UBERON:0005068!5.71e-108!57;UBERON:0006241!5.71e-108!57;UBERON:0007135!5.71e-108!57;UBERON:0002616!1.19e-88!59;UBERON:0001017!5.26e-87!82;UBERON:0005743!1.35e-82!86;UBERON:0000955!6.07e-82!69;UBERON:0006238!6.07e-82!69;UBERON:0003075!1.74e-79!86;UBERON:0007284!1.74e-79!86;UBERON:0000073!7.93e-78!94;UBERON:0001016!7.93e-78!94;UBERON:0002780!1.28e-75!41;UBERON:0001890!1.28e-75!41;UBERON:0006240!1.28e-75!41;UBERON:0002346!1.48e-75!90;UBERON:0003080!1.11e-73!42;UBERON:0001893!2.87e-73!34;UBERON:0002020!4.21e-73!34;UBERON:0003528!4.21e-73!34;UBERON:0007023!4.55e-70!115;UBERON:0002791!7.30e-70!33;UBERON:0001869!4.70e-66!32;UBERON:0002619!7.54e-49!22;UBERON:0003056!9.43e-49!61;UBERON:0000033!7.72e-45!123;UBERON:0000956!1.10e-42!25;UBERON:0000203!1.10e-42!25;UBERON:0000153!2.42e-42!129;UBERON:0007811!2.42e-42!129;UBERON:0001950!4.28e-42!20;UBERON:0004121!2.00e-41!169;UBERON:0000924!2.99e-40!173;UBERON:0006601!2.99e-40!173;UBERON:0002308!5.85e-34!9;UBERON:0000125!5.85e-34!9;UBERON:0003076!6.89e-34!15;UBERON:0003057!6.89e-34!15;UBERON:0004732!2.13e-27!13;UBERON:0009663!7.47e-27!7;UBERON:0000025!8.13e-27!194;UBERON:0002420!1.13e-26!9;UBERON:0007245!1.13e-26!9;UBERON:0010009!1.13e-26!9;UBERON:0010011!1.13e-26!9;UBERON:0000454!1.13e-26!9;UBERON:0004733!7.61e-24!12;UBERON:0002028!7.61e-24!12;UBERON:0007277!7.61e-24!12;UBERON:0002298!3.63e-23!8;UBERON:0000200!4.77e-22!6;UBERON:0004111!1.05e-19!241;UBERON:0000477!4.07e-16!286;UBERON:0000483!4.55e-16!309;UBERON:0000119!8.13e-16!312;UBERON:0000369!1.26e-15!4;UBERON:0002435!1.26e-15!4;UBERON:0000204!1.26e-15!4;UBERON:0010082!1.26e-15!4;UBERON:0000064!6.18e-15!219;UBERON:0002680!2.02e-14!9;UBERON:0001895!2.02e-14!9;UBERON:0010092!2.02e-14!9;UBERON:0000475!6.09e-13!365;UBERON:0000349!1.43e-12!5;UBERON:0000988!1.50e-12!3;UBERON:0006331!1.62e-12!3;UBERON:0001872!1.66e-12!5;UBERON:0002240!2.21e-12!3;UBERON:0002771!3.12e-12!3;UBERON:0002021!3.29e-12!5;UBERON:0001896!3.78e-12!3;UBERON:0005290!3.78e-12!3;UBERON:0010096!3.78e-12!3;UBERON:0005383!4.39e-12!3;UBERON:0005382!4.39e-12!3;UBERON:0001871!1.14e-11!7;UBERON:0005162!1.85e-09!2;UBERON:0000122!1.85e-09!2;UBERON:0001897!2.18e-09!2;UBERON:0001875!2.66e-09!2;UBERON:0006514!2.66e-09!2;UBERON:0002148!8.00e-09!2;UBERON:0009662!8.00e-09!2;UBERON:0000062!8.26e-09!511;UBERON:0001954!8.31e-09!2;UBERON:0003022!8.31e-09!2;UBERON:0002421!8.31e-09!2;UBERON:0002600!8.31e-09!2;UBERON:0001873!1.13e-08!2;UBERON:0010122!1.13e-08!2;UBERON:0001870!1.72e-08!2;UBERON:0002360!5.66e-08!2;UBERON:0000094!5.66e-08!2;UBERON:0007645!5.66e-08!2;UBERON:0005174!1.37e-07!5;UBERON:0001137!1.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.37e-71;34!UBERON:0003528;2.10e-67;34!UBERON:0002020;2.10e-67;34!UBERON:0002791;1.90e-65;32!UBERON:0001869;2.64e-65;32!UBERON:0002780;1.92e-61;41!UBERON:0001890;1.92e-61;41!UBERON:0000073;1.66e-55;53!UBERON:0002616;1.66e-55;53!UBERON:0002619;7.74e-53;22!UBERON:0000956;2.75e-46;25!UBERON:0000203;2.75e-46;25!UBERON:0001950;7.39e-45;20!UBERON:0000125;7.99e-41;9!UBERON:0002308;7.99e-41;9!UBERON:0001017;5.50e-39;75!UBERON:0000955;7.13e-35;68!UBERON:0009663;3.84e-32;7!UBERON:0002420;4.81e-32;9!UBERON:0007245;4.81e-32;9!UBERON:0010009;4.81e-32;9!UBERON:0010011;4.81e-32;9!UBERON:0000454;4.81e-32;9!UBERON:0001016;9.74e-30;83!UBERON:0002298;1.71e-27;6!UBERON:0004732;1.10e-21;13!UBERON:0007023;2.00e-19;114!UBERON:0000200;7.43e-19;6!UBERON:0000369;1.69e-18;4!UBERON:0002435;1.69e-18;4!UBERON:0000204;1.69e-18;4!UBERON:0004733;6.73e-18;12!UBERON:0002028;6.73e-18;12!UBERON:0000349;5.66e-15;5!UBERON:0000988;6.46e-15;3!UBERON:0001872;7.85e-15;5!UBERON:0002240;1.40e-14;3!UBERON:0005174;1.40e-14;3!UBERON:0001137;1.40e-14;3!UBERON:0002021;1.80e-14;5!UBERON:0001896;2.37e-14;3!UBERON:0005290;2.37e-14;3!UBERON:0005383;3.19e-14;3!UBERON:0005382;3.19e-14;3!UBERON:0011216;4.62e-13;132!UBERON:0005162;4.14e-11;2!UBERON:0000122;4.14e-11;2!UBERON:0001897;5.03e-11;2!UBERON:0010225;5.03e-11;2!UBERON:0001875;6.25e-11;2!UBERON:0006514;6.25e-11;2!UBERON:0001871;1.90e-10;6!UBERON:0002148;2.06e-10;2!UBERON:0006331;2.06e-10;2!UBERON:0009662;2.06e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0002771;3.52e-10;2!UBERON:0001873;3.77e-10;2!UBERON:0010314;1.86e-09;132!UBERON:0002680;2.19e-08;9!UBERON:0001895;2.19e-08;9!UBERON:0001870;3.28e-07;3!UBERON:0001894;6.48e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-115,56;UBERON:0005068,1.14e-115,56;UBERON:0006241,1.14e-115,56;UBERON:0007135,1.14e-115,56;UBERON:0000073,2.04e-103,53;UBERON:0002616,2.04e-103,53;UBERON:0001017,3.39e-90,81;UBERON:0000955,1.19e-87,68;UBERON:0006238,1.19e-87,68;UBERON:0002780,3.92e-86,41;UBERON:0001890,3.92e-86,41;UBERON:0003080,3.92e-86,41;UBERON:0006240,3.92e-86,41;UBERON:0001016,4.62e-85,89;UBERON:0001893,1.29e-82,34;UBERON:0003528,2.02e-82,34;UBERON:0002020,2.02e-82,34;UBERON:0003075,1.36e-81,82;UBERON:0007284,1.36e-81,82;UBERON:0002346,1.75e-77,86;UBERON:0002791,3.41e-74,32;UBERON:0001869,5.09e-74,32;UBERON:0007023,9.77e-64,114;UBERON:0010371,7.32e-63,104;UBERON:0003056,1.13e-60,61;UBERON:0002619,7.13e-53,22;UBERON:0010314,1.08e-50,132;UBERON:0000956,2.56e-46,25;UBERON:0000203,2.56e-46,25;UBERON:0001950,6.72e-45,20;UBERON:0004121,3.15e-41,171;UBERON:0000924,3.15e-41,171;UBERON:0006601,3.15e-41,171;UBERON:0000125,8.99e-41,9;UBERON:0002308,8.99e-41,9;UBERON:0009663,3.67e-32,7;UBERON:0002420,4.92e-32,9;UBERON:0007245,4.92e-32,9;UBERON:0010009,4.92e-32,9;UBERON:0010011,4.92e-32,9;UBERON:0000454,4.92e-32,9;UBERON:0011216,1.90e-31,223;UBERON:0003076,8.02e-29,15;UBERON:0003057,8.02e-29,15;UBERON:0000025,1.18e-28,192;UBERON:0002298,1.97e-27,6;UBERON:0004732,1.20e-21,13;UBERON:0004111,2.33e-21,240;UBERON:0000200,9.50e-19,6;UBERON:0000369,1.44e-18,4;UBERON:0002435,1.44e-18,4;UBERON:0000204,1.44e-18,4;UBERON:0010082,1.44e-18,4;UBERON:0004733,7.29e-18,12;UBERON:0002028,7.29e-18,12;UBERON:0007277,7.29e-18,12;UBERON:0000483,3.17e-16,306;UBERON:0000119,5.45e-16,309;UBERON:0000349,5.98e-15,5;UBERON:0001872,7.17e-15,5;UBERON:0000988,7.62e-15,3;UBERON:0002240,1.21e-14,3;UBERON:0005174,1.21e-14,3;UBERON:0001137,1.21e-14,3;UBERON:0002021,1.64e-14,5;UBERON:0001896,2.32e-14,3;UBERON:0005290,2.32e-14,3;UBERON:0010096,2.32e-14,3;UBERON:0005383,2.79e-14,3;UBERON:0005382,2.79e-14,3;UBERON:0005162,4.14e-11,2;UBERON:0000122,4.14e-11,2;UBERON:0001897,5.03e-11,2;UBERON:0010225,5.03e-11,2;UBERON:0001875,6.41e-11,2;UBERON:0006514,6.41e-11,2;UBERON:0001871,1.95e-10,6;UBERON:0002148,2.42e-10,2;UBERON:0006331,2.42e-10,2;UBERON:0009662,2.42e-10,2;UBERON:0001954,2.54e-10,2;UBERON:0003022,2.54e-10,2;UBERON:0002421,2.54e-10,2;UBERON:0002600,2.54e-10,2;UBERON:0001873,3.68e-10,2;UBERON:0010122,3.68e-10,2;UBERON:0002771,3.86e-10,2;UBERON:0002680,2.35e-08,9;UBERON:0001895,2.35e-08,9;UBERON:0010092,2.35e-08,9;UBERON:0000923,1.32e-07,560;UBERON:0010316,1.32e-07,560;UBERON:0005291,1.32e-07,560;UBERON:0006598,1.32e-07,560;UBERON:0010317,1.32e-07,560;UBERON:0002532,1.32e-07,560;UBERON:0002050,1.73e-07,564;UBERON:0001870,3.13e-07,3;UBERON:0005423,5.11e-07,581;UBERON:0001894,6.42e-07,7;UBERON:0006222,6.42e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51673541026282,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,8.25636073640476,0,0,0,0,0,0,0,0,0,0,8.85741385813839,2.53252521113357,1.52581736317083,0.552896299656123,0.591095237907095,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9066673834398,0,9.83910672046424,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77425516727902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2092463516154,9.44647114354752,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15706720828373,4.35850899557042,0,0,0,0,0,3.34122561619136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07629894899288,5.2893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.27091927156871,5.63359188179249,4.58727356552057,4.54809111301094,5.40238705590036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53033744606923,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58794258339198,2.8339315265117,3.67157875831448,6.97395638418567,0,2.62797559364028,3.71393984953257,24.2708014440562,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20039401561639,8.59185908475232,3.72036233702131,5.64400710725771,0,0,0,0,0,0,0,0,0,0,0,0,8.3602771561503,2.43359262182542,0,0,0,3.92788974790005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.330518099391,5.94092800654172,2.5359343655004,0,0,0,0,0,0,0,0,0,8.17035623963272,0,2.85564258801842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5833887891756,12.825691486875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@RBPJ | |||
}} |
Revision as of 00:34, 22 January 2014
Short description: | p10@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBPJ_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000515573_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RA45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data