FFCP PHASE1:Hg19::chr4:21635843..21635847,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C670 | |||
|description=CAGE_peak_at_chr4:21635843..21635847,- | |||
|id=chr4:21635843..21635847,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.85e-20;3!UBERON:0006601;1.47e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.72e-80!57;UBERON:0005068!9.72e-80!57;UBERON:0006241!9.72e-80!57;UBERON:0007135!9.72e-80!57;UBERON:0000955!9.61e-74!69;UBERON:0006238!9.61e-74!69;UBERON:0002616!5.23e-73!59;UBERON:0001017!1.50e-66!82;UBERON:0005743!6.22e-66!86;UBERON:0002780!8.99e-65!41;UBERON:0001890!8.99e-65!41;UBERON:0006240!8.99e-65!41;UBERON:0000073!4.01e-64!94;UBERON:0001016!4.01e-64!94;UBERON:0003080!4.75e-63!42;UBERON:0003075!1.62e-60!86;UBERON:0007284!1.62e-60!86;UBERON:0002346!2.58e-57!90;UBERON:0007023!2.88e-56!115;UBERON:0002020!2.09e-55!34;UBERON:0003528!2.09e-55!34;UBERON:0001893!2.67e-55!34;UBERON:0002791!9.24e-53!33;UBERON:0001869!5.85e-51!32;UBERON:0003056!1.18e-49!61;UBERON:0002619!6.64e-43!22;UBERON:0000033!1.03e-42!123;UBERON:0000153!3.52e-40!129;UBERON:0007811!3.52e-40!129;UBERON:0001950!1.39e-37!20;UBERON:0000956!2.52e-37!25;UBERON:0000203!2.52e-37!25;UBERON:0004121!4.89e-32!169;UBERON:0000924!5.16e-31!173;UBERON:0006601!5.16e-31!173;UBERON:0002420!2.39e-20!9;UBERON:0007245!2.39e-20!9;UBERON:0010009!2.39e-20!9;UBERON:0010011!2.39e-20!9;UBERON:0000454!2.39e-20!9;UBERON:0000025!4.40e-20!194;UBERON:0002308!1.41e-19!9;UBERON:0000125!1.41e-19!9;UBERON:0000200!4.47e-18!6;UBERON:0004733!6.05e-18!12;UBERON:0002028!6.05e-18!12;UBERON:0007277!6.05e-18!12;UBERON:0001871!1.16e-17!7;UBERON:0003076!3.93e-17!15;UBERON:0003057!3.93e-17!15;UBERON:0004732!2.00e-16!13;UBERON:0002298!7.16e-16!8;UBERON:0000349!1.69e-15!5;UBERON:0009663!8.39e-15!7;UBERON:0004111!8.77e-15!241;UBERON:0000064!1.04e-12!219;UBERON:0000477!3.23e-12!286;UBERON:0000483!6.27e-12!309;UBERON:0000119!1.07e-11!312;UBERON:0002680!2.24e-11!9;UBERON:0001895!2.24e-11!9;UBERON:0010092!2.24e-11!9;UBERON:0001894!1.25e-10!7;UBERON:0006222!1.25e-10!7;UBERON:0000475!3.41e-10!365;UBERON:0001872!7.81e-10!5;UBERON:0002771!8.23e-10!3;UBERON:0000988!5.33e-09!3;UBERON:0001896!8.32e-09!3;UBERON:0005290!8.32e-09!3;UBERON:0010096!8.32e-09!3;UBERON:0006331!1.07e-08!3;UBERON:0000062!3.97e-08!511;UBERON:0000481!4.01e-08!347;UBERON:0000369!8.93e-08!4;UBERON:0002435!8.93e-08!4;UBERON:0000204!8.93e-08!4;UBERON:0010082!8.93e-08!4;UBERON:0003296!1.27e-07!4;UBERON:0010133!1.27e-07!4;UBERON:0001870!1.68e-07!2;UBERON:0001905!1.73e-07!2;UBERON:0002757!1.73e-07!2;UBERON:0010134!1.73e-07!2;UBERON:0002784!1.73e-07!2;UBERON:0005408!1.73e-07!2;UBERON:0001899!1.73e-07!2;UBERON:0001876!2.15e-07!2;UBERON:0001954!3.93e-07!2;UBERON:0003022!3.93e-07!2;UBERON:0002421!3.93e-07!2;UBERON:0002600!3.93e-07!2;UBERON:0000922!5.97e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.78e-54;32!UBERON:0003528;6.50e-50;34!UBERON:0002020;6.50e-50;34!UBERON:0002791;6.17e-48;32!UBERON:0001893;1.21e-46;34!UBERON:0002619;2.44e-45;22!UBERON:0002780;2.01e-42;41!UBERON:0001890;2.01e-42;41!UBERON:0000956;8.00e-40;25!UBERON:0000203;8.00e-40;25!UBERON:0001950;8.55e-36;20!UBERON:0000073;4.67e-34;53!UBERON:0002616;4.67e-34;53!UBERON:0000349;7.94e-32;5!UBERON:0000955;2.89e-28;68!UBERON:0000200;2.45e-27;6!UBERON:0002420;9.01e-26;9!UBERON:0007245;9.01e-26;9!UBERON:0010009;9.01e-26;9!UBERON:0010011;9.01e-26;9!UBERON:0000454;9.01e-26;9!UBERON:0001017;3.14e-24;75!UBERON:0001870;5.66e-21;3!UBERON:0001016;6.55e-19;83!UBERON:0000125;4.88e-18;9!UBERON:0002308;4.88e-18;9!UBERON:0000369;1.14e-15;4!UBERON:0002435;1.14e-15;4!UBERON:0000204;1.14e-15;4!UBERON:0009663;2.61e-15;7!UBERON:0002702;1.18e-14;2!UBERON:0001905;2.01e-14;2!UBERON:0002757;2.01e-14;2!UBERON:0010134;2.01e-14;2!UBERON:0005408;2.01e-14;2!UBERON:0001899;2.01e-14;2!UBERON:0001876;4.92e-14;2!UBERON:0001954;1.19e-13;2!UBERON:0003022;1.19e-13;2!UBERON:0002421;1.19e-13;2!UBERON:0002600;1.19e-13;2!UBERON:0001872;3.28e-12;5!UBERON:0002680;1.05e-11;9!UBERON:0001895;1.05e-11;9!UBERON:0002037;2.41e-10;6!UBERON:0005383;3.84e-10;3!UBERON:0005382;3.84e-10;3!UBERON:0011216;4.02e-10;132!UBERON:0007023;2.23e-09;114!UBERON:0001871;5.06e-09;6!UBERON:0004733;8.25e-09;12!UBERON:0002028;8.25e-09;12!UBERON:0001874;3.09e-08;1!UBERON:0004732;3.86e-08;13!UBERON:0002581;1.14e-07;1!UBERON:0001882;1.14e-07;1!UBERON:0005795;1.14e-07;1!UBERON:0003112;1.14e-07;1!UBERON:0011158;1.14e-07;1!UBERON:0007190;1.14e-07;1!UBERON:0003128;1.14e-07;1!UBERON:0005403;1.14e-07;1!UBERON:0001703;1.14e-07;1!UBERON:0002241;1.14e-07;1!UBERON:0003296;1.22e-07;4!UBERON:0010133;1.22e-07;4!UBERON:0002784;1.22e-07;4!UBERON:0010314;9.79e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.74e-65,53;UBERON:0002616,8.74e-65,53;UBERON:0001049,3.85e-61,56;UBERON:0005068,3.85e-61,56;UBERON:0006241,3.85e-61,56;UBERON:0007135,3.85e-61,56;UBERON:0001869,5.16e-60,32;UBERON:0002780,5.68e-58,41;UBERON:0001890,5.68e-58,41;UBERON:0003080,5.68e-58,41;UBERON:0006240,5.68e-58,41;UBERON:0000955,6.39e-58,68;UBERON:0006238,6.39e-58,68;UBERON:0003528,1.81e-56,34;UBERON:0002020,1.81e-56,34;UBERON:0001893,2.21e-56,34;UBERON:0002791,1.44e-53,32;UBERON:0001017,3.67e-52,81;UBERON:0001016,1.36e-46,89;UBERON:0002619,2.12e-45,22;UBERON:0003075,3.34e-44,82;UBERON:0007284,3.34e-44,82;UBERON:0003056,5.14e-42,61;UBERON:0002346,5.87e-42,86;UBERON:0000956,7.09e-40,25;UBERON:0000203,7.09e-40,25;UBERON:0001950,8.32e-36,20;UBERON:0010371,5.75e-34,104;UBERON:0000349,4.76e-32,5;UBERON:0007023,5.95e-31,114;UBERON:0010314,3.13e-28,132;UBERON:0000200,5.28e-27,6;UBERON:0002420,1.01e-25,9;UBERON:0007245,1.01e-25,9;UBERON:0010009,1.01e-25,9;UBERON:0010011,1.01e-25,9;UBERON:0000454,1.01e-25,9;UBERON:0004121,2.46e-22,171;UBERON:0000924,2.46e-22,171;UBERON:0006601,2.46e-22,171;UBERON:0001870,8.47e-21,3;UBERON:0011216,9.87e-21,223;UBERON:0000125,8.21e-18,9;UBERON:0002308,8.21e-18,9;UBERON:0000369,1.43e-15,4;UBERON:0002435,1.43e-15,4;UBERON:0000204,1.43e-15,4;UBERON:0010082,1.43e-15,4;UBERON:0009663,4.08e-15,7;UBERON:0000025,8.21e-15,192;UBERON:0002702,1.35e-14,2;UBERON:0001905,1.65e-14,2;UBERON:0002757,1.65e-14,2;UBERON:0010134,1.65e-14,2;UBERON:0005408,1.65e-14,2;UBERON:0001899,1.65e-14,2;UBERON:0001876,2.63e-14,2;UBERON:0001954,9.79e-14,2;UBERON:0003022,9.79e-14,2;UBERON:0002421,9.79e-14,2;UBERON:0002600,9.79e-14,2;UBERON:0001872,3.69e-12,5;UBERON:0002680,9.05e-12,9;UBERON:0001895,9.05e-12,9;UBERON:0010092,9.05e-12,9;UBERON:0004111,6.33e-11,240;UBERON:0002037,1.87e-10,6;UBERON:0006215,1.87e-10,6;UBERON:0005383,3.84e-10,3;UBERON:0005382,3.84e-10,3;UBERON:0001871,4.24e-09,6;UBERON:0004733,7.37e-09,12;UBERON:0002028,7.37e-09,12;UBERON:0007277,7.37e-09,12;UBERON:0000483,1.88e-08,306;UBERON:0000119,2.53e-08,309;UBERON:0001874,2.89e-08,1;UBERON:0004732,3.48e-08,13;UBERON:0003112,6.97e-08,1;UBERON:0011158,6.97e-08,1;UBERON:0003128,6.97e-08,1;UBERON:0001703,6.97e-08,1;UBERON:0002241,6.97e-08,1;UBERON:0004761,6.97e-08,1;UBERON:0009617,6.97e-08,1;UBERON:0003296,1.11e-07,4;UBERON:0010133,1.11e-07,4;UBERON:0002784,1.11e-07,4;UBERON:0002581,1.18e-07,1;UBERON:0001882,1.54e-07,1;UBERON:0005403,1.54e-07,1;UBERON:0007190,1.99e-07,1;UBERON:0003076,4.18e-07,15;UBERON:0003057,4.18e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0.211125408127993,0.19924798825107,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,4.34147179051469,1.52581736317083,1.87984741883082,4.72876190325676,1.75508317723178,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.49823746722733,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,0.488105059607853,2.253436752717,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.982886743728125,0,0,0,0,0,0,0,0,0,1.28458450192919,0,2.55414174491442,1.64093091392604,0,0.691572524642179,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,1.08060135389431,2.34323429584154,1.44680757550829,0.317079050969534,0,0,0,0,0,2.67850917939143,2.69026977775059,0,0.91064876540519,0,0,0,0.679697329768317,1.44700101838268,0,0,0.078493092850514,4.87058328739606,0,2.73947616152849,0,0,0.500335809236594,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0.815897882290976,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | |||
|short_description=p@chr4:21635843..21635847,- | |||
}} |
Revision as of 00:26, 22 January 2014
Short description: | p@chr4:21635843..21635847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:21635843..21635847, - |
Coexpression cluster: | C670_putamen_parietal_pineal_caudate_middle_occipital_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data