FFCP PHASE1:Hg19::chr3:189840026..189840048,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19317 | |||
|TSSclassifier=not | |||
|UniProt=D3DNV8,Q8IVL5 | |||
|association_with_transcript=177bp_to_ENST00000427335,NM_001134418,uc003fsg.2_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_10_at_LEPREL1_5end | |||
|id=chr3:189840026..189840048,- | |||
|ontology_enrichment_celltype=CL:0002327!2.22e-08!4;CL:0000066!5.36e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002327;4.11e-23;4!CL:0000946;4.59e-23;1!CL:0000786;4.59e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.28e-23,1;CL:0000786,3.28e-23,1;CL:0000980,3.28e-23,1;CL:0002327,4.11e-23,4;CL:0000785,2.59e-12,2;CL:0000955,2.59e-12,2;CL:0000818,2.59e-12,2;CL:0000954,2.59e-12,2;CL:0000816,2.59e-12,2;CL:0000817,1.21e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.06e-12;2!UBERON:0007297;3.06e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;8.31e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,8.31e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000076!2.61e-10!8;UBERON:0001911!2.22e-08!4;UBERON:0005333!2.22e-08!4;UBERON:0008425!2.22e-08!4;UBERON:0005311!2.22e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.11e-23;4!UBERON:0001301;4.59e-23;1!UBERON:0006947;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0005904;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.11e-23,4;UBERON:0005333,4.11e-23,4;UBERON:0008425,4.11e-23,4;UBERON:0005311,4.11e-23,4;UBERON:0001301,5.13e-23,1;UBERON:0000076,4.42e-12,8;UBERON:0005103,6.88e-12,8;UBERON:0000083,6.88e-12,8;UBERON:0009201,6.88e-12,8;UBERON:0006553,6.88e-12,8;UBERON:0003074,6.88e-12,8;UBERON:0003060,6.88e-12,8;UBERON:0000080,1.12e-10,9;UBERON:0002120,1.12e-10,9;UBERON:0004875,1.12e-10,9;UBERON:0005721,1.12e-10,9;UBERON:0005754,1.12e-10,9;UBERON:0007297,1.12e-10,9;UBERON:0004876,6.61e-09,11;UBERON:0006947,1.40e-08,3;UBERON:0004054,1.40e-08,3;UBERON:0002113,2.93e-08,26;UBERON:0003918,2.93e-08,26;UBERON:0011143,2.93e-08,26;UBERON:0005095,2.93e-08,26;UBERON:0007687,2.93e-08,26;UBERON:0003887,3.07e-08,12;UBERON:0000489,5.08e-07,31;UBERON:0005904,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,2.68675568108545,6.39394664730716,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.157611414598396,0,0,12.729401092632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.680117776536817,0,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0,0,0,0,0,0,4.53447941559105,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,3.29416102629736,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p10@LEPREL1 | |||
}} |
Revision as of 23:17, 21 January 2014
Short description: | p10@LEPREL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LEPREL1_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 177bp_to_ENST00000427335, NM_001134418, uc003fsg.2_5end |
EntrezGene: | LEPREL1 |
HGNC: | 19317 |
UniProt: | D3DNV8Q8IVL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.28e-23 | 1 |
plasma cell | 3.28e-23 | 1 |
plasmablast | 3.28e-23 | 1 |
mammary gland epithelial cell | 4.11e-23 | 4 |
mature B cell | 2.59e-12 | 2 |
pre-B-II cell | 2.59e-12 | 2 |
transitional stage B cell | 2.59e-12 | 2 |
small pre-B-II cell | 2.59e-12 | 2 |
immature B cell | 2.59e-12 | 2 |
precursor B cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 4.11e-23 | 4 |
mammary bud | 4.11e-23 | 4 |
mammary ridge | 4.11e-23 | 4 |
mammary placode | 4.11e-23 | 4 |
epididymis | 5.13e-23 | 1 |
external ectoderm | 4.42e-12 | 8 |
mesonephric epithelium | 6.88e-12 | 8 |
mesonephric tubule | 6.88e-12 | 8 |
nephric duct | 6.88e-12 | 8 |
renal duct | 6.88e-12 | 8 |
mesonephric duct | 6.88e-12 | 8 |
pronephric duct | 6.88e-12 | 8 |
mesonephros | 1.12e-10 | 9 |
pronephros | 1.12e-10 | 9 |
nephrogenic cord | 1.12e-10 | 9 |
pronephric mesoderm | 1.12e-10 | 9 |
rostral part of nephrogenic cord | 1.12e-10 | 9 |
presumptive pronephric mesoderm | 1.12e-10 | 9 |
urogenital ridge | 6.61e-09 | 11 |
male genital duct | 1.40e-08 | 3 |
internal male genitalia | 1.40e-08 | 3 |
kidney | 2.93e-08 | 26 |
kidney mesenchyme | 2.93e-08 | 26 |
upper urinary tract | 2.93e-08 | 26 |
kidney rudiment | 2.93e-08 | 26 |
kidney field | 2.93e-08 | 26 |
intraembryonic coelom | 3.07e-08 | 12 |
cavitated compound organ | 5.08e-07 | 31 |
duct of male reproductive system | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 8.31e-09 | 3 |