FFCP PHASE1:Hg19::chr3:133614314..133614358,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14902 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRW1 | |||
|association_with_transcript=0bp_to_ENST00000477759_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RAB6B_5end | |||
|id=chr3:133614314..133614358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.83e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.07e-08,5;CL:0000047,1.27e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.15e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.57e-51!115;UBERON:0005743!9.87e-44!86;UBERON:0001017!1.53e-43!82;UBERON:0000073!4.96e-40!94;UBERON:0001016!4.96e-40!94;UBERON:0001049!2.26e-38!57;UBERON:0005068!2.26e-38!57;UBERON:0006241!2.26e-38!57;UBERON:0007135!2.26e-38!57;UBERON:0000955!3.71e-35!69;UBERON:0006238!3.71e-35!69;UBERON:0003075!9.40e-33!86;UBERON:0007284!9.40e-33!86;UBERON:0002616!3.02e-32!59;UBERON:0002346!8.14e-31!90;UBERON:0002780!2.04e-30!41;UBERON:0001890!2.04e-30!41;UBERON:0006240!2.04e-30!41;UBERON:0003080!3.20e-29!42;UBERON:0001893!1.85e-28!34;UBERON:0002020!1.94e-28!34;UBERON:0003528!1.94e-28!34;UBERON:0002791!1.46e-27!33;UBERON:0001869!3.68e-27!32;UBERON:0004121!4.37e-25!169;UBERON:0000924!3.39e-24!173;UBERON:0006601!3.39e-24!173;UBERON:0000153!2.44e-23!129;UBERON:0007811!2.44e-23!129;UBERON:0000033!3.81e-23!123;UBERON:0003056!7.94e-23!61;UBERON:0000956!1.15e-21!25;UBERON:0000203!1.15e-21!25;UBERON:0002619!1.27e-20!22;UBERON:0001950!5.99e-19!20;UBERON:0000025!3.18e-12!194;UBERON:0004111!1.37e-11!241;UBERON:0003076!4.04e-10!15;UBERON:0003057!4.04e-10!15;UBERON:0000477!1.43e-09!286;UBERON:0000922!1.20e-08!612;UBERON:0004732!1.57e-08!13;UBERON:0002420!2.95e-08!9;UBERON:0007245!2.95e-08!9;UBERON:0010009!2.95e-08!9;UBERON:0010011!2.95e-08!9;UBERON:0000454!2.95e-08!9;UBERON:0002308!3.49e-08!9;UBERON:0000125!3.49e-08!9;UBERON:0004733!5.09e-08!12;UBERON:0002028!5.09e-08!12;UBERON:0007277!5.09e-08!12;UBERON:0001871!6.22e-08!7;UBERON:0000064!1.86e-07!219;UBERON:0000483!3.26e-07!309;UBERON:0000468!5.24e-07!659;UBERON:0000119!7.60e-07!312;UBERON:0000200!8.86e-07!6;UBERON:0000481!9.72e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.44e-39;32!UBERON:0001893;1.45e-39;34!UBERON:0003528;1.81e-39;34!UBERON:0002020;1.81e-39;34!UBERON:0002791;5.13e-39;32!UBERON:0002619;1.13e-36;22!UBERON:0000956;3.39e-34;25!UBERON:0000203;3.39e-34;25!UBERON:0001950;1.39e-33;20!UBERON:0000073;1.56e-33;53!UBERON:0002616;1.56e-33;53!UBERON:0002780;1.58e-33;41!UBERON:0001890;1.58e-33;41!UBERON:0001017;3.78e-26;75!UBERON:0000955;2.35e-23;68!UBERON:0001016;1.26e-22;83!UBERON:0007023;1.63e-14;114!UBERON:0002420;1.12e-13;9!UBERON:0007245;1.12e-13;9!UBERON:0010009;1.12e-13;9!UBERON:0010011;1.12e-13;9!UBERON:0000454;1.12e-13;9!UBERON:0000125;1.49e-13;9!UBERON:0002308;1.49e-13;9!UBERON:0004732;6.17e-13;13!UBERON:0004733;5.15e-12;12!UBERON:0002028;5.15e-12;12!UBERON:0001871;8.78e-12;6!UBERON:0000200;3.97e-11;6!UBERON:0009663;1.16e-10;7!UBERON:0002298;3.60e-10;6!UBERON:0002021;2.53e-09;5!UBERON:0000349;2.66e-09;5!UBERON:0001872;2.73e-09;5!UBERON:0011216;3.72e-09;132!UBERON:0002680;3.76e-08;9!UBERON:0001895;3.76e-08;9!UBERON:0000369;1.82e-07;4!UBERON:0002435;1.82e-07;4!UBERON:0000204;1.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-67,81;UBERON:0001016,1.14e-62,89;UBERON:0001049,4.44e-62,56;UBERON:0005068,4.44e-62,56;UBERON:0006241,4.44e-62,56;UBERON:0007135,4.44e-62,56;UBERON:0000073,6.24e-58,53;UBERON:0002616,6.24e-58,53;UBERON:0000955,8.73e-54,68;UBERON:0006238,8.73e-54,68;UBERON:0007023,3.45e-50,114;UBERON:0003075,2.05e-47,82;UBERON:0007284,2.05e-47,82;UBERON:0002780,6.01e-47,41;UBERON:0001890,6.01e-47,41;UBERON:0003080,6.01e-47,41;UBERON:0006240,6.01e-47,41;UBERON:0001893,1.55e-46,34;UBERON:0003528,1.70e-46,34;UBERON:0002020,1.70e-46,34;UBERON:0002346,2.36e-44,86;UBERON:0001869,3.97e-44,32;UBERON:0002791,1.69e-43,32;UBERON:0002619,1.55e-36,22;UBERON:0010371,2.96e-36,104;UBERON:0004121,2.10e-34,171;UBERON:0000924,2.10e-34,171;UBERON:0006601,2.10e-34,171;UBERON:0003056,3.30e-34,61;UBERON:0000956,4.69e-34,25;UBERON:0000203,4.69e-34,25;UBERON:0001950,1.89e-33,20;UBERON:0010314,1.54e-28,132;UBERON:0011216,2.17e-22,223;UBERON:0003076,1.19e-15,15;UBERON:0003057,1.19e-15,15;UBERON:0000025,3.70e-15,192;UBERON:0002420,8.05e-14,9;UBERON:0007245,8.05e-14,9;UBERON:0010009,8.05e-14,9;UBERON:0010011,8.05e-14,9;UBERON:0000454,8.05e-14,9;UBERON:0000125,1.10e-13,9;UBERON:0002308,1.10e-13,9;UBERON:0004732,8.46e-13,13;UBERON:0004111,3.57e-12,240;UBERON:0004733,7.26e-12,12;UBERON:0002028,7.26e-12,12;UBERON:0007277,7.26e-12,12;UBERON:0001871,1.14e-11,6;UBERON:0000200,3.97e-11,6;UBERON:0009663,8.43e-11,7;UBERON:0002298,3.87e-10,6;UBERON:0002021,2.60e-09,5;UBERON:0000349,2.68e-09,5;UBERON:0000922,2.71e-09,592;UBERON:0001872,2.73e-09,5;UBERON:0002680,4.97e-08,9;UBERON:0001895,4.97e-08,9;UBERON:0010092,4.97e-08,9;UBERON:0000369,1.82e-07,4;UBERON:0002435,1.82e-07,4;UBERON:0000204,1.82e-07,4;UBERON:0010082,1.82e-07,4;UBERON:0005423,3.97e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,1.10808952269109,0,0.940364164434263,2.28988789704845,0.821246550437305,0.502170558379211,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0,0.790513071238134,8.12070268085818,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.775250277507987,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.756787138224657,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,3.17131635936948,3.31324420803713,5.11253348625881,3.31715376049185,3.02785021050754,2.55484151353081,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,2.36315962672562,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,1.44331342025273,1.15930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0.763976851116555,0,1.71072446022705,0.102827492703324,3.30377363628309,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,1.30139853857622,3.86644406388848,1.84267891867784,1.91381625495949,0.749007023947182,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0.232420756919918,0,1.40354529212299,0.0920809889358963,0.114814448164607,0,0.131124414959424,1.35359883872224,2.0794141018192,0,1.46139224653261,1.37217117560738,0,0.170093705276516,0,0,0,1.50506932156456,1.27438136522519,0,0.447749509444357,3.28889814968902,1.0457418040996,0,0.328014645699706,0.325378394664303,0.515205058238611,0.27470839445503,0.247528499761764,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,2.29391162142713,1.70894156152249,0.714695326373367,0.411362273086194,1.94541993357815,1.08006287447623,1.58625035258854,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,2.921597462471,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,17.8500747794149,0,0,0,0.146508179271894,0,0,0,0,2.07875276582847,0,19.882952955326,21.2410818779874,0,0,0.211125408127993,0.796991953004279,0,0.251932747854276,1.53403023753232,0,0,0,0,0,0.493217028184668,0,0,51.3746355430466,48.2394110441627,13.9729658600836,0,0,0,0,0.254253650292766,0,0.689486746482929,0,1.73624994933292,5.31444831488303,12.3008367397916,3.05163472634166,5.63954225649246,9.16197618755997,42.1219962535627,0,0,0.923403102045565,0,0,0,0.108647371922008,0,0,0,0,0,3.15802195610297,0,0.392125068635479,0.839107934879214,0,0.794682894901893,0.421996129056054,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,5.66169517037687,0,13.3530734063443,0,0,0.485560759068186,7.49710365413842,1.20990716048664,13.1611287501111,1.39010475182674,0.60129367765797,0.72581733978073,0,0,0,0,1.70765727617876,0.277349346026277,2.2562765983567,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.484945082442097,1.3238419003725,6.32746074185491,0,0,55.4602572573497,0.195551382734803,0.160317640503067,0.213452994739353,0.39961921916426,0,0.572682980829578,0,0,0,0.235694034616795,1.35904206073614,0.941425616810999,0.101998217636322,0.288950589901519,3.60252173225874,2.87501295673185,0,0.429765441419957,0,2.23425921017803,1.3749625440701,0,0.599037001496973,0.858452096273142,1.56220020209311,0.53746777989381,0,0,0,0,0,0.196854963029498,0,27.8330391433256,18.2512564189511,0.482259445395058,1.65047323916681,1.24632101408756,0,0,71.5629777431531,0,1.10327990218877,2.25554728980492,0,0,0,4.2881719582402,1.98627591109629,0,0.542999601753713,0,0.326587360109409,0,4.67927368271232,0,0,0,0,17.7117650215324,12.0331667585848,0.171086837884329,0,0.533937062838473,0.628817220398664,0,0.496166021811951,0,0,0,0,0.7520696820681,0.612691153526923,0.327872630709804,0.628216385000937,22.1517044991746,48.5664534309813,33.6763603600485,4.0138643698305,5.32459447376891,15.1515223176976,1.52183498429854,0,0.909894705249887,1.14186133417987,0,0,1.88397337194073,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0.380805212168795,1.22061219961398,0,0,0,0,0,0,0,0,0.192619830407303,4.50327341887344,0,0,0.463044948647668,0.2447367045064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| |||
|short_description=p3@RAB6B | |||
}} |
Revision as of 21:29, 21 January 2014
Short description: | p3@RAB6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000477759_5end |
EntrezGene: | RAB6B |
HGNC: | 14902 |
UniProt: | Q9NRW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.07e-08 | 5 |
neuronal stem cell | 1.27e-07 | 8 |