FFCP PHASE1:Hg19::chr3:12045798..12045809,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7H8,Q86VA8 | |||
|association_with_transcript=-52bp_to_ENST00000540660,NM_003178,NM_133625,uc003bwl.1,uc003bwm.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYN2_5end | |||
|id=chr3:12045798..12045809,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.73e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.54e-19;82!UBERON:0006215;6.32e-12;3!UBERON:0010122;3.43e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.08e-63!57;UBERON:0005068!2.08e-63!57;UBERON:0006241!2.08e-63!57;UBERON:0007135!2.08e-63!57;UBERON:0005743!1.87e-58!86;UBERON:0001017!6.25e-58!82;UBERON:0000073!2.77e-57!94;UBERON:0001016!2.77e-57!94;UBERON:0002616!1.24e-52!59;UBERON:0000955!1.22e-51!69;UBERON:0006238!1.22e-51!69;UBERON:0003075!7.17e-50!86;UBERON:0007284!7.17e-50!86;UBERON:0002780!1.98e-47!41;UBERON:0001890!1.98e-47!41;UBERON:0006240!1.98e-47!41;UBERON:0002346!7.06e-47!90;UBERON:0002020!3.22e-46!34;UBERON:0003528!3.22e-46!34;UBERON:0001893!4.57e-46!34;UBERON:0003080!4.90e-46!42;UBERON:0002791!2.43e-44!33;UBERON:0001869!1.36e-43!32;UBERON:0007023!1.48e-43!115;UBERON:0002619!4.92e-37!22;UBERON:0003056!2.79e-35!61;UBERON:0001950!9.87e-34!20;UBERON:0000956!7.38e-32!25;UBERON:0000203!7.38e-32!25;UBERON:0004121!1.82e-31!169;UBERON:0000924!2.80e-30!173;UBERON:0006601!2.80e-30!173;UBERON:0000033!1.37e-29!123;UBERON:0000153!1.93e-27!129;UBERON:0007811!1.93e-27!129;UBERON:0003076!9.11e-18!15;UBERON:0003057!9.11e-18!15;UBERON:0002420!3.56e-16!9;UBERON:0007245!3.56e-16!9;UBERON:0010009!3.56e-16!9;UBERON:0010011!3.56e-16!9;UBERON:0000454!3.56e-16!9;UBERON:0002308!8.56e-16!9;UBERON:0000125!8.56e-16!9;UBERON:0000025!2.31e-14!194;UBERON:0004733!1.57e-13!12;UBERON:0002028!1.57e-13!12;UBERON:0007277!1.57e-13!12;UBERON:0009663!1.16e-12!7;UBERON:0004732!2.72e-12!13;UBERON:0000200!4.93e-12!6;UBERON:0001871!9.60e-12!7;UBERON:0000475!1.03e-11!365;UBERON:0001872!3.15e-10!5;UBERON:0000349!3.39e-10!5;UBERON:0002298!3.52e-10!8;UBERON:0000064!6.92e-10!219;UBERON:0002021!7.25e-10!5;UBERON:0004111!1.21e-09!241;UBERON:0002680!2.63e-09!9;UBERON:0001895!2.63e-09!9;UBERON:0010092!2.63e-09!9;UBERON:0000483!3.97e-09!309;UBERON:0000119!7.05e-09!312;UBERON:0000922!7.89e-09!612;UBERON:0000369!9.90e-09!4;UBERON:0002435!9.90e-09!4;UBERON:0000204!9.90e-09!4;UBERON:0010082!9.90e-09!4;UBERON:0000062!1.93e-08!511;UBERON:0000477!1.19e-07!286;UBERON:0005383!5.83e-07!3;UBERON:0005382!5.83e-07!3;UBERON:0002771!7.44e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.90e-78;32!UBERON:0002619;2.04e-78;22!UBERON:0003528;6.64e-77;34!UBERON:0002020;6.64e-77;34!UBERON:0002791;2.07e-73;32!UBERON:0001950;2.52e-71;20!UBERON:0001893;5.68e-71;34!UBERON:0000956;1.05e-68;25!UBERON:0000203;1.05e-68;25!UBERON:0002780;1.91e-59;41!UBERON:0001890;1.91e-59;41!UBERON:0000073;1.60e-58;53!UBERON:0002616;1.60e-58;53!UBERON:0000955;4.29e-44;68!UBERON:0001017;4.90e-42;75!UBERON:0001016;3.78e-32;83!UBERON:0000200;7.14e-24;6!UBERON:0004733;3.12e-23;12!UBERON:0002028;3.12e-23;12!UBERON:0002420;2.10e-21;9!UBERON:0007245;2.10e-21;9!UBERON:0010009;2.10e-21;9!UBERON:0010011;2.10e-21;9!UBERON:0000454;2.10e-21;9!UBERON:0004732;2.53e-21;13!UBERON:0002298;2.58e-21;6!UBERON:0000125;9.17e-21;9!UBERON:0002308;9.17e-21;9!UBERON:0001871;3.13e-20;6!UBERON:0001872;3.87e-20;5!UBERON:0000349;6.20e-20;5!UBERON:0002021;2.27e-19;5!UBERON:0007023;3.44e-17;114!UBERON:0000369;6.04e-17;4!UBERON:0002435;6.04e-17;4!UBERON:0000204;6.04e-17;4!UBERON:0002680;1.81e-14;9!UBERON:0001895;1.81e-14;9!UBERON:0009663;1.98e-14;7!UBERON:0005383;3.81e-13;3!UBERON:0005382;3.81e-13;3!UBERON:0001870;6.02e-13;3!UBERON:0011216;1.98e-12;132!UBERON:0000988;8.23e-12;3!UBERON:0001896;3.03e-11;3!UBERON:0005290;3.03e-11;3!UBERON:0002771;2.92e-09;2!UBERON:0002702;3.10e-09;2!UBERON:0001876;3.16e-09;2!UBERON:0001873;3.43e-09;2!UBERON:0010314;8.10e-09;132!UBERON:0001954;1.25e-08;2!UBERON:0003022;1.25e-08;2!UBERON:0002421;1.25e-08;2!UBERON:0002600;1.25e-08;2!UBERON:0002148;2.14e-08;2!UBERON:0006331;2.14e-08;2!UBERON:0009662;2.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.39e-111,56;UBERON:0005068,4.39e-111,56;UBERON:0006241,4.39e-111,56;UBERON:0007135,4.39e-111,56;UBERON:0000073,1.65e-106,53;UBERON:0002616,1.65e-106,53;UBERON:0000955,5.18e-94,68;UBERON:0006238,5.18e-94,68;UBERON:0001017,7.15e-90,81;UBERON:0003528,1.18e-88,34;UBERON:0002020,1.18e-88,34;UBERON:0001869,2.96e-88,32;UBERON:0002780,3.36e-83,41;UBERON:0001890,3.36e-83,41;UBERON:0003080,3.36e-83,41;UBERON:0006240,3.36e-83,41;UBERON:0001893,8.46e-83,34;UBERON:0002791,8.72e-82,32;UBERON:0001016,4.02e-80,89;UBERON:0002619,1.76e-78,22;UBERON:0003075,2.46e-73,82;UBERON:0007284,2.46e-73,82;UBERON:0001950,2.44e-71,20;UBERON:0002346,1.57e-69,86;UBERON:0000956,9.25e-69,25;UBERON:0000203,9.25e-69,25;UBERON:0010371,5.50e-56,104;UBERON:0003056,7.70e-54,61;UBERON:0007023,3.91e-51,114;UBERON:0010314,1.13e-44,132;UBERON:0004121,1.05e-37,171;UBERON:0000924,1.05e-37,171;UBERON:0006601,1.05e-37,171;UBERON:0011216,1.09e-29,223;UBERON:0003076,2.63e-27,15;UBERON:0003057,2.63e-27,15;UBERON:0000025,4.06e-26,192;UBERON:0000200,5.76e-24,6;UBERON:0004733,3.63e-23,12;UBERON:0002028,3.63e-23,12;UBERON:0007277,3.63e-23,12;UBERON:0002420,1.89e-21,9;UBERON:0007245,1.89e-21,9;UBERON:0010009,1.89e-21,9;UBERON:0010011,1.89e-21,9;UBERON:0000454,1.89e-21,9;UBERON:0002298,2.78e-21,6;UBERON:0004732,2.91e-21,13;UBERON:0000125,8.52e-21,9;UBERON:0002308,8.52e-21,9;UBERON:0001871,2.56e-20,6;UBERON:0001872,4.28e-20,5;UBERON:0000349,5.00e-20,5;UBERON:0002021,2.55e-19,5;UBERON:0004111,5.10e-19,240;UBERON:0000369,6.82e-17,4;UBERON:0002435,6.82e-17,4;UBERON:0000204,6.82e-17,4;UBERON:0010082,6.82e-17,4;UBERON:0002680,1.82e-14,9;UBERON:0001895,1.82e-14,9;UBERON:0010092,1.82e-14,9;UBERON:0009663,2.01e-14,7;UBERON:0005383,4.05e-13,3;UBERON:0005382,4.05e-13,3;UBERON:0001870,5.57e-13,3;UBERON:0000483,6.85e-13,306;UBERON:0000119,1.13e-12,309;UBERON:0000988,7.22e-12,3;UBERON:0001896,3.71e-11,3;UBERON:0005290,3.71e-11,3;UBERON:0010096,3.71e-11,3;UBERON:0001876,2.70e-09,2;UBERON:0002771,2.92e-09,2;UBERON:0002702,2.92e-09,2;UBERON:0001873,3.71e-09,2;UBERON:0010122,3.71e-09,2;UBERON:0001954,1.12e-08,2;UBERON:0003022,1.12e-08,2;UBERON:0002421,1.12e-08,2;UBERON:0002600,1.12e-08,2;UBERON:0002148,1.91e-08,2;UBERON:0006331,1.91e-08,2;UBERON:0009662,1.91e-08,2;UBERON:0000922,3.55e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0.284136146806413,0,0,0,6.95903353436409,7.87748731898871,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,5.56608588971108,9.98068990005971,0,0,0,0,0,0,0,0,0.173624994933292,5.31444831488303,8.92413645828019,3.05163472634166,3.42795705786796,3.54657142744257,4.8264787373874,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0.337005664903385,0,3.51396668588009,0,0,0,0,0,1.22429104652196,0.379119477770928,0.300646838828985,0.103688191397247,1.32930774541437,1.323967823502,0.941798755221676,1.19472429772959,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,6.71094437132314,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,4.35850899557042,0.321506296930038,0,0.415440338029185,0,0,6.25720433577654,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78346938537737,1.45455861916959,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,10.6328181596038,14.3990992584317,5.75878281249899,1.14681839138014,1.66393577305278,1.1177352529449,0.415045904808692,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66859588222096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0,0,7.19367321080347,2.8339315265117,3.83121261737163,8.61488729811171,3.02486035466062,6.22415272177961,7.42787969906515,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,5.94330744641873,7.02970288752463,7.44072467404263,5.51717548686989,6.56369770821863,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0,0,3.53442611479525,4.86718524365083,0.118193840883968,0,0.078493092850514,14.6117498621882,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.713520544665411,0.11294608203896,0.329821550236287,0,0.0771741581079447,0,0,0,0,3.33724394095407,0.297046400327086,1.6906229103336,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0,7.88701286214611,2.61810414204226,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0.407955318967927,0.26721740526556,0.18378979906969,0,0.227336094654718,2.14371304124943,0,1.44806194206653,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@SYN2 | |||
}} |
Revision as of 17:24, 21 January 2014
Short description: | p3@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -52bp_to_ENST00000540660, NM_003178, NM_133625, uc003bwl.1, uc003bwm.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | F5H7H8Q86VA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data