FFCP PHASE1:Hg19::chr21:28215332..28215347,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9510 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=217 | |||
|TSSclassifier=strong | |||
|UniProt=E5RI60 | |||
|association_with_transcript=0bp_to_ENST00000517777_5end | |||
|description=CAGE_peak_6_at_ADAMTS1_5end | |||
|id=chr21:28215332..28215347,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;1.38e-09;2!CL:0000137;1.38e-09;2!CL:0000092;1.38e-09;2!CL:0000135;8.38e-07;3!CL:0000388;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.86e-09,2;CL:0000137,1.86e-09,2;CL:0000092,1.86e-09,2;CL:0000062,6.16e-07,11;CL:0000375,6.16e-07,11;CL:0000335,6.16e-07,11;CL:0000135,8.15e-07,3;CL:0000388,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000335;6.16e-07;11!UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3!UBERON:0009847;8.38e-07;3!UBERON:0003353;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;1.38e-09;2!DOID:4305;1.38e-09;2!DOID:3307;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2;DOID:200,1.86e-09,2;DOID:4305,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;8.01e-18;1!UBERON:0000026;8.01e-18;1!UBERON:0008784;8.01e-18;1!UBERON:0006058;8.01e-18;1!UBERON:0003663;8.01e-18;1!UBERON:0004256;8.01e-18;1!UBERON:0004708;8.01e-18;1!UBERON:0002101;8.01e-18;1!UBERON:0004709;8.01e-18;1!UBERON:0002529;8.01e-18;1!UBERON:0010538;8.01e-18;1!UBERON:0003661;8.01e-18;1!UBERON:0010890;8.01e-18;1!UBERON:0002471;8.01e-18;1!UBERON:0001383;8.01e-18;1!UBERON:0010758;8.01e-18;1!UBERON:0010707;8.01e-18;1!UBERON:0000978;8.01e-18;1!UBERON:0002103;8.01e-18;1!UBERON:0001665;8.01e-18;1!UBERON:0003823;8.01e-18;1!UBERON:0000154;8.01e-18;1!UBERON:0010709;8.01e-18;1!UBERON:0005090;1.38e-09;2!UBERON:0001630;1.38e-09;2!UBERON:0002240;8.38e-07;3!UBERON:0007846;8.38e-07;3!UBERON:0005174;8.38e-07;3!UBERON:0000043;8.38e-07;3!UBERON:0007845;8.38e-07;3!UBERON:0001137;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,8.72e-18,1;UBERON:0001389,8.72e-18,1;UBERON:0000026,8.72e-18,1;UBERON:0008784,8.72e-18,1;UBERON:0006058,8.72e-18,1;UBERON:0003663,8.72e-18,1;UBERON:0004256,8.72e-18,1;UBERON:0004708,8.72e-18,1;UBERON:0002101,8.72e-18,1;UBERON:0004709,8.72e-18,1;UBERON:0002529,8.72e-18,1;UBERON:0010538,8.72e-18,1;UBERON:0003661,8.72e-18,1;UBERON:0010890,8.72e-18,1;UBERON:0002471,8.72e-18,1;UBERON:0001383,8.72e-18,1;UBERON:0004357,8.72e-18,1;UBERON:0004347,8.72e-18,1;UBERON:0005420,8.72e-18,1;UBERON:0005732,8.72e-18,1;UBERON:0010758,8.72e-18,1;UBERON:0010707,8.72e-18,1;UBERON:0000978,8.72e-18,1;UBERON:0002103,8.72e-18,1;UBERON:0001665,8.72e-18,1;UBERON:0003823,8.72e-18,1;UBERON:0000154,8.72e-18,1;UBERON:0010709,8.72e-18,1;UBERON:0005733,8.72e-18,1;UBERON:0005730,8.72e-18,1;UBERON:0005090,1.44e-09,2;UBERON:0001630,1.44e-09,2;UBERON:0002240,7.28e-07,3;UBERON:0005174,7.28e-07,3;UBERON:0001137,7.28e-07,3;UBERON:0007846,8.15e-07,3;UBERON:0000043,8.15e-07,3;UBERON:0007845,8.15e-07,3 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.457847324091717,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,1.3940745403212,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0,0,0,0.422215270595328,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0.537063524026827,0,0.690503839458535,0,0,0,0,0,0,0.174919999992391,0,0,0,0.472775363535873,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0.219385397153973,2.61452312445576,0,0.307801034015188,0.683652335082007,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0,0.609414446062818,0.17472666824203,0,0.580537987734511,0.365446585430928,0.328461828212837,0.484945082442097,0,0.225980740780532,0,0,0,0,0.881747022766871,0.85381197895741,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0.858452096273142,0,0.470284307407084,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.717149357331379,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.517131825446202,0,0.171086837884329,0,0.213574825135389,2.20086027139532,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.436838552768056,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.346576998451015,1.1441462864015,0,1.5913297769302,1.27857558193737,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,1.02041020705668,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0.955538938977433,0,0,0,1.29485767437579,0.205325613712494,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0,0.735444965261716,0,1.57046773691956,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,1.38652688589425,0,0,0.109265571963696,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.653150243690884,0.684466602170562,0.0673520530145875,0.358611026963382,0.665320713092027,0,0.533636729388577,1.9307228228694,0,0,0.855690109280065,0,0,0.402547587182052,0 | |||
|short_description=p6@ADAMTS1 | |||
}} |
Revision as of 13:13, 21 January 2014
Short description: | p6@ADAMTS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAMTS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517777_5end |
EntrezGene: | ADAMTS1 |
HGNC: | 217 |
UniProt: | E5RI60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.86e-09 | 2 |
osteocyte | 1.86e-09 | 2 |
osteoclast | 1.86e-09 | 2 |
osteoblast | 6.16e-07 | 11 |
osteoprogenitor cell | 6.16e-07 | 11 |
mesenchyme condensation cell | 6.16e-07 | 11 |
fibrocyte | 8.15e-07 | 3 |
tendon cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 8.72e-18 | 1 |
soleus muscle | 8.72e-18 | 1 |
appendage | 8.72e-18 | 1 |
lower limb segment | 8.72e-18 | 1 |
multi-limb segment region | 8.72e-18 | 1 |
hindlimb muscle | 8.72e-18 | 1 |
hindlimb zeugopod muscle | 8.72e-18 | 1 |
paired limb/fin | 8.72e-18 | 1 |
limb | 8.72e-18 | 1 |
pelvic appendage | 8.72e-18 | 1 |
limb segment | 8.72e-18 | 1 |
paired limb/fin segment | 8.72e-18 | 1 |
limb muscle | 8.72e-18 | 1 |
pelvic complex muscle | 8.72e-18 | 1 |
zeugopod | 8.72e-18 | 1 |
muscle of leg | 8.72e-18 | 1 |
paired limb/fin bud | 8.72e-18 | 1 |
limb bud | 8.72e-18 | 1 |
pelvic appendage bud | 8.72e-18 | 1 |
limb/fin field | 8.72e-18 | 1 |
subdivision of organism along appendicular axis | 8.72e-18 | 1 |
appendage girdle complex | 8.72e-18 | 1 |
leg | 8.72e-18 | 1 |
hindlimb | 8.72e-18 | 1 |
triceps surae | 8.72e-18 | 1 |
hindlimb zeugopod | 8.72e-18 | 1 |
posterior region of body | 8.72e-18 | 1 |
pelvic complex | 8.72e-18 | 1 |
limb field | 8.72e-18 | 1 |
hindlimb/pelvic fin field | 8.72e-18 | 1 |
muscle structure | 1.44e-09 | 2 |
muscle organ | 1.44e-09 | 2 |
spinal cord | 7.28e-07 | 3 |
dorsal region element | 7.28e-07 | 3 |
dorsum | 7.28e-07 | 3 |
dense regular connective tissue | 8.15e-07 | 3 |
tendon | 8.15e-07 | 3 |
regular connective tissue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.46e-10 | 2 |
giant cell tumor | 1.86e-09 | 2 |
bone giant cell tumor | 1.86e-09 | 2 |