FFCP PHASE1:Hg19::chr20:30307572..30307593,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:30307572..30307593,- | |||
|id=chr20:30307572..30307593,- | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-11!254;CL:1000507!4.33e-07!12;CL:1000494!4.33e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.22e-18;10!CL:1000494;2.22e-18;10!CL:1000497;7.04e-15;17!CL:0002518;7.04e-15;17!CL:1000449;2.89e-14;15!CL:0002681;8.20e-09;12!CL:0002584;8.20e-09;12!CL:0002149;4.04e-07;6!CL:0002255;4.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.01e-18,10;CL:1000494,1.01e-18,10;CL:1000497,3.49e-15,17;CL:0002518,3.49e-15,17;CL:1000449,1.61e-14,15;CL:0000066,6.60e-14,253;CL:0002681,6.16e-09,12;CL:0002584,6.16e-09,12;CL:0000223,2.11e-07,58;CL:0002149,2.84e-07,6;CL:0002255,2.84e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.16e-07;13!UBERON:0001041;9.76e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.09e-10!106;DOID:299!3.41e-10!25;DOID:0050687!3.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:299;1.22e-22;25!DOID:3001;4.04e-07;6!DOID:3493;9.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,9.95e-23,25;DOID:305,1.06e-14,106;DOID:0050687,8.24e-09,143;DOID:3001,2.84e-07,6;DOID:3493,9.78e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002100!6.78e-12!216;UBERON:0000119!4.44e-11!312;UBERON:0000466!4.70e-11!126;UBERON:0009569!5.10e-11!113;UBERON:0000483!6.05e-11!309;UBERON:0000058!4.04e-10!26;UBERON:0000475!4.50e-10!365;UBERON:0000481!4.72e-10!347;UBERON:0000477!7.92e-10!286;UBERON:0000464!8.56e-10!104;UBERON:0003914!2.21e-09!118;UBERON:0003104!2.61e-09!238;UBERON:0009142!2.61e-09!238;UBERON:0005177!6.45e-09!107;UBERON:0000468!1.11e-08!659;UBERON:0004111!2.99e-08!241;UBERON:0000025!6.23e-08!194;UBERON:0000467!2.83e-07!625;UBERON:0000923!3.25e-07!604;UBERON:0005291!3.25e-07!604;UBERON:0006598!3.25e-07!604;UBERON:0002532!3.25e-07!604;UBERON:0000480!3.60e-07!626;UBERON:0002050!4.12e-07!605;UBERON:0005423!4.12e-07!605;UBERON:0009773!4.33e-07!12;UBERON:0001231!4.33e-07!12;UBERON:0004810!4.33e-07!12;UBERON:0000490!4.51e-07!138;UBERON:0006555!5.07e-07!17;UBERON:0005103!5.07e-07!17;UBERON:0000083!5.07e-07!17;UBERON:0009201!5.07e-07!17;UBERON:0004819!5.07e-07!17;UBERON:0006553!5.07e-07!17;UBERON:0003074!5.07e-07!17;UBERON:0003060!5.07e-07!17;UBERON:0002553!5.37e-07!70;UBERON:0000922!6.03e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.22e-18;10!UBERON:0009773;2.22e-18;10!UBERON:0001231;2.22e-18;10!UBERON:0004810;2.22e-18;10!UBERON:0006555;2.89e-14;15!UBERON:0004819;2.89e-14;15!UBERON:0001285;2.89e-14;15!UBERON:0007684;2.89e-14;15!UBERON:0002113;6.48e-14;24!UBERON:0011143;6.48e-14;24!UBERON:0000489;5.55e-11;29!UBERON:0006554;1.63e-10;30!UBERON:0001008;1.63e-10;30!UBERON:0001225;8.20e-09;12!UBERON:0008987;8.20e-09;12!UBERON:0001851;8.29e-09;15!UBERON:0000058;1.18e-08;10!UBERON:0005172;4.90e-07;52!UBERON:0005173;4.90e-07;52!UBERON:0000353;7.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.01e-18,10;UBERON:0004211,1.61e-14,15;UBERON:0009773,1.61e-14,15;UBERON:0001231,1.61e-14,15;UBERON:0001285,1.61e-14,15;UBERON:0007684,1.61e-14,15;UBERON:0004208,1.61e-14,15;UBERON:0006555,1.79e-13,16;UBERON:0004819,1.79e-13,16;UBERON:0002113,6.58e-13,26;UBERON:0003918,6.58e-13,26;UBERON:0011143,6.58e-13,26;UBERON:0005095,6.58e-13,26;UBERON:0007687,6.58e-13,26;UBERON:0005177,1.86e-10,101;UBERON:0000489,2.52e-10,31;UBERON:0005172,3.75e-10,54;UBERON:0005173,3.75e-10,54;UBERON:0002100,7.40e-10,199;UBERON:0009569,1.15e-09,112;UBERON:0000058,4.94e-09,19;UBERON:0001225,6.16e-09,12;UBERON:0008987,6.16e-09,12;UBERON:0003914,6.72e-09,117;UBERON:0001851,7.69e-09,15;UBERON:0002417,1.07e-08,60;UBERON:0000916,1.07e-08,60;UBERON:0003104,1.29e-08,160;UBERON:0009142,1.29e-08,160;UBERON:0006554,3.17e-08,47;UBERON:0001008,5.57e-08,48;UBERON:0000353,6.20e-07,15;UBERON:0003103,7.96e-07,68 | |||
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| |||
|short_description=p@chr20:30307572..30307593,- | |||
}} |
Revision as of 10:41, 21 January 2014
Short description: | p@chr20:30307572..30307593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30307572..30307593, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.01e-18 | 10 |
nephron tubule epithelial cell | 1.01e-18 | 10 |
kidney cell | 3.49e-15 | 17 |
kidney epithelial cell | 3.49e-15 | 17 |
epithelial cell of nephron | 1.61e-14 | 15 |
epithelial cell | 6.60e-14 | 253 |
kidney cortical cell | 6.16e-09 | 12 |
renal cortical epithelial cell | 6.16e-09 | 12 |
endodermal cell | 2.11e-07 | 58 |
epithelial cell of uterus | 2.84e-07 | 6 |
stromal cell of endometrium | 2.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.01e-18 | 10 |
nephron epithelium | 1.61e-14 | 15 |
renal tubule | 1.61e-14 | 15 |
nephron tubule | 1.61e-14 | 15 |
nephron | 1.61e-14 | 15 |
uriniferous tubule | 1.61e-14 | 15 |
nephrogenic mesenchyme | 1.61e-14 | 15 |
excretory tube | 1.79e-13 | 16 |
kidney epithelium | 1.79e-13 | 16 |
kidney | 6.58e-13 | 26 |
kidney mesenchyme | 6.58e-13 | 26 |
upper urinary tract | 6.58e-13 | 26 |
kidney rudiment | 6.58e-13 | 26 |
kidney field | 6.58e-13 | 26 |
trunk region element | 1.86e-10 | 101 |
cavitated compound organ | 2.52e-10 | 31 |
abdomen element | 3.75e-10 | 54 |
abdominal segment element | 3.75e-10 | 54 |
trunk | 7.40e-10 | 199 |
subdivision of trunk | 1.15e-09 | 112 |
duct | 4.94e-09 | 19 |
cortex of kidney | 6.16e-09 | 12 |
renal parenchyma | 6.16e-09 | 12 |
epithelial tube | 6.72e-09 | 117 |
cortex | 7.69e-09 | 15 |
abdominal segment of trunk | 1.07e-08 | 60 |
abdomen | 1.07e-08 | 60 |
mesenchyme | 1.29e-08 | 160 |
entire embryonic mesenchyme | 1.29e-08 | 160 |
urinary system structure | 3.17e-08 | 47 |
renal system | 5.57e-08 | 48 |
parenchyma | 6.20e-07 | 15 |
compound organ | 7.96e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 9.95e-23 | 25 |
carcinoma | 1.06e-14 | 106 |
cell type cancer | 8.24e-09 | 143 |
female reproductive endometrioid cancer | 2.84e-07 | 6 |
signet ring cell adenocarcinoma | 9.78e-07 | 2 |