FFCP PHASE1:Hg19::chr2:241987807..241987808,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=25992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24696 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENST00000469006_5end | |||
|description=CAGE_peak_22_at_SNED1_5end | |||
|id=chr2:241987807..241987808,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.22e-10!9;CL:0002564!3.94e-10!3;CL:0000594!4.85e-09!3;CL:0002575!2.54e-07!2;CL:0002602!3.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.22e-44;3!CL:0002575;8.34e-18;2!CL:0000135;2.45e-12;3!CL:0000214;2.45e-12;3!CL:0000388;2.45e-12;3!CL:0000669;1.38e-09;4!CL:0002188;6.33e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,9.77e-45,3;CL:0002575,1.07e-17,2;CL:0000135,1.85e-12,3;CL:0000388,1.85e-12,3;CL:0000214,3.24e-12,3;CL:0000669,1.57e-09,4;CL:0002188,6.13e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!2.58e-10!5;UBERON:0000982!2.58e-10!5;UBERON:0004770!2.58e-10!5;UBERON:0002242!3.94e-10!3;UBERON:0003068!3.94e-10!3;UBERON:0002328!3.94e-10!3;UBERON:0004880!3.94e-10!3;UBERON:0009568!3.04e-07!2;UBERON:0002216!3.04e-07!2;UBERON:0002209!3.04e-07!2;UBERON:0002213!3.04e-07!2;UBERON:0004267!3.04e-07!2;UBERON:0006444!3.04e-07!2;UBERON:0001995!3.04e-07!2;UBERON:0004715!3.04e-07!2;UBERON:0001468!3.04e-07!2;UBERON:0001130!3.04e-07!2;UBERON:0001066!3.04e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;1.22e-44;3!UBERON:0004905;1.25e-37;8!UBERON:0000982;1.25e-37;8!UBERON:0004770;1.25e-37;8!UBERON:0011135;2.72e-27;5!UBERON:0002216;2.72e-27;5!UBERON:0011134;2.72e-27;5!UBERON:0002209;2.72e-27;5!UBERON:0002213;2.72e-27;5!UBERON:0007844;2.72e-27;5!UBERON:0011138;2.72e-27;5!UBERON:0001130;2.72e-27;5!UBERON:0001066;2.72e-27;5!UBERON:0001468;2.72e-27;5!UBERON:0007846;2.45e-12;3!UBERON:0006915;2.45e-12;3!UBERON:0007616;2.45e-12;3!UBERON:0000043;2.45e-12;3!UBERON:0007845;2.45e-12;3!UBERON:0002217;2.45e-12;3!UBERON:0002018;2.45e-12;3!UBERON:0000075;2.89e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,9.77e-45,3;UBERON:0003068,9.77e-45,3;UBERON:0002328,9.77e-45,3;UBERON:0004880,9.77e-45,3;UBERON:0004905,1.51e-37,8;UBERON:0000982,1.51e-37,8;UBERON:0004770,1.51e-37,8;UBERON:0011135,2.38e-27,5;UBERON:0002216,2.38e-27,5;UBERON:0011134,2.38e-27,5;UBERON:0002209,2.38e-27,5;UBERON:0002213,2.38e-27,5;UBERON:0005856,2.38e-27,5;UBERON:0005866,2.38e-27,5;UBERON:0005863,2.38e-27,5;UBERON:0007844,2.38e-27,5;UBERON:0011138,2.38e-27,5;UBERON:0001130,2.38e-27,5;UBERON:0001066,2.38e-27,5;UBERON:0001468,2.38e-27,5;UBERON:0007846,1.85e-12,3;UBERON:0000043,1.85e-12,3;UBERON:0007845,1.85e-12,3;UBERON:0006915,3.24e-12,3;UBERON:0007616,3.24e-12,3;UBERON:0002217,3.24e-12,3;UBERON:0002018,3.24e-12,3;UBERON:0011137,1.81e-10,14;UBERON:0000075,2.77e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0.723280468230358,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.37257369524342,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.214840489736547,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,1.31717957183961,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.84870251452567,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@SNED1 | |||
}} |
Revision as of 09:38, 21 January 2014
Short description: | p22@SNED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_SNED1_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_ENST00000469006_5end |
EntrezGene: | SNED1 |
HGNC: | 24696 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 9.77e-45 | 3 |
central nervous system pericyte | 1.07e-17 | 2 |
fibrocyte | 1.85e-12 | 3 |
tendon cell | 1.85e-12 | 3 |
synovial cell | 3.24e-12 | 3 |
pericyte cell | 1.57e-09 | 4 |
glomerular endothelial cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 9.77e-45 | 3 |
axial mesoderm | 9.77e-45 | 3 |
notochord | 9.77e-45 | 3 |
chordamesoderm | 9.77e-45 | 3 |
articulation | 1.51e-37 | 8 |
skeletal joint | 1.51e-37 | 8 |
articular system | 1.51e-37 | 8 |
intervertebral cartilage | 2.38e-27 | 5 |
symphysis | 2.38e-27 | 5 |
nonsynovial joint | 2.38e-27 | 5 |
fibrous joint | 2.38e-27 | 5 |
cartilaginous joint | 2.38e-27 | 5 |
developing mesenchymal condensation | 2.38e-27 | 5 |
pre-cartilage condensation | 2.38e-27 | 5 |
cartilaginous condensation | 2.38e-27 | 5 |
cartilage element | 2.38e-27 | 5 |
post-cranial axial skeletal system | 2.38e-27 | 5 |
vertebral column | 2.38e-27 | 5 |
intervertebral disk | 2.38e-27 | 5 |
intervertebral joint | 2.38e-27 | 5 |
dense regular connective tissue | 1.85e-12 | 3 |
tendon | 1.85e-12 | 3 |
regular connective tissue | 1.85e-12 | 3 |
stratified squamous epithelium | 3.24e-12 | 3 |
layer of synovial tissue | 3.24e-12 | 3 |
synovial joint | 3.24e-12 | 3 |
synovial membrane of synovial joint | 3.24e-12 | 3 |
axial skeletal system | 1.81e-10 | 14 |
subdivision of skeletal system | 2.77e-09 | 16 |