FFCP PHASE1:Hg19::chr2:161056746..161056753,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3694 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |||
|TSSclassifier=strong | |||
|UniProt=E9PEE8 | |||
|association_with_transcript=9bp_to_ENST00000428609,uc010fou.2,uc010zcq.1_5end | |||
|coexpression_cluster_id=C1497 | |||
|description=CAGE_peak_6_at_ITGB6_5end | |||
|id=chr2:161056746..161056753,- | |||
|ontology_enrichment_celltype=CL:0002368!2.67e-18!13;CL:0000066!4.65e-18!254;CL:0002076!1.92e-17!43;CL:0002159!1.36e-12!13;CL:0000223!2.63e-12!59;CL:0002202!5.24e-11!9;CL:0002632!5.24e-11!9;CL:0000244!1.04e-09!4;CL:0000731!1.04e-09!4;CL:0002621!2.09e-08!3;CL:0002166!3.42e-08!3;CL:0000349!7.79e-08!3;CL:0002577!7.79e-08!3;CL:0002541!7.97e-08!3;CL:0000068!3.12e-07!3;CL:0000069!3.12e-07!3;CL:0002328!3.12e-07!3;CL:0000307!3.12e-07!3;CL:0000377!3.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.55e-27;19!CL:0002076;2.20e-15;42!CL:0002621;2.82e-15;3!CL:0002166;9.92e-15;3!CL:0002577;3.90e-14;3!CL:0002541;4.26e-14;3!CL:0002368;1.57e-11;13!CL:0002159;3.25e-11;14!CL:0002536;1.10e-10;2!CL:0002327;1.40e-10;4!CL:0000317;1.24e-09;2!CL:1000448;1.24e-09;2!CL:0002308;1.24e-09;2!CL:0002140;1.24e-09;2!CL:0002537;7.67e-09;5!CL:0002251;8.92e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.24e-27,19;CL:0002076,7.09e-18,42;CL:0002621,2.82e-15,3;CL:0002166,7.53e-15,3;CL:0000066,2.23e-14,253;CL:0002577,3.90e-14,3;CL:0002541,4.08e-14,3;CL:0000223,4.24e-12,58;CL:0002368,1.57e-11,13;CL:0002159,2.44e-11,14;CL:0002536,1.15e-10,2;CL:0002327,1.55e-10,4;CL:0000317,7.62e-10,2;CL:1000448,7.62e-10,2;CL:0002308,7.62e-10,2;CL:0002140,7.62e-10,2;CL:0002537,7.27e-09,5;CL:0002251,9.50e-08,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.24e-22!14;UBERON:0000158!3.24e-22!14;UBERON:0004119!5.69e-17!169;UBERON:0000925!5.69e-17!169;UBERON:0006595!5.69e-17!169;UBERON:0003124!9.98e-16!7;UBERON:0001004!5.14e-12!72;UBERON:0000478!1.29e-11!24;UBERON:0000365!1.64e-11!5;UBERON:0006554!4.60e-11!44;UBERON:0005153!6.60e-11!37;UBERON:0000065!9.43e-11!53;UBERON:0001008!1.02e-10!45;UBERON:0005911!8.33e-10!82;UBERON:0001987!1.39e-09!4;UBERON:0004340!1.39e-09!4;UBERON:0005910!1.65e-09!6;UBERON:0005157!6.46e-09!51;UBERON:0005178!6.51e-09!34;UBERON:0002224!6.51e-09!34;UBERON:0000305!1.01e-08!7;UBERON:0000161!1.23e-08!35;UBERON:0000064!1.38e-08!219;UBERON:0005181!1.45e-08!35;UBERON:0007196!1.54e-08!14;UBERON:0001558!1.54e-08!14;UBERON:0001007!1.87e-08!155;UBERON:0001555!1.87e-08!155;UBERON:0007026!1.87e-08!155;UBERON:0001949!2.09e-08!3;UBERON:0000476!7.97e-08!3;UBERON:0000920!7.97e-08!3;UBERON:0004871!1.48e-07!8;UBERON:0004923!2.88e-07!57;UBERON:0004815!3.12e-07!3;UBERON:0002031!3.12e-07!3;UBERON:0000077!3.18e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.67e-28;10!UBERON:0000158;2.67e-28;10!UBERON:0000478;7.84e-21;24!UBERON:0000305;1.29e-16;7!UBERON:0001949;2.82e-15;3!UBERON:0003124;4.26e-14;3!UBERON:0000920;4.26e-14;3!UBERON:0001708;3.64e-11;4!UBERON:0008895;3.64e-11;4!UBERON:0001987;1.01e-10;4!UBERON:0001911;1.40e-10;4!UBERON:0000486;7.29e-10;12!UBERON:0002419;1.24e-09;2!UBERON:0007771;1.24e-09;2!UBERON:0003297;1.24e-09;2!UBERON:0001821;1.24e-09;2!UBERON:0003487;1.24e-09;2!UBERON:0001820;1.24e-09;2!UBERON:0011159;5.12e-09;5!UBERON:0003729;8.42e-09;13!UBERON:0004923;4.24e-08;55!UBERON:0003929;8.97e-07;7!UBERON:0000065;9.05e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.34e-37,14;UBERON:0000158,2.34e-37,14;UBERON:0003124,1.26e-22,7;UBERON:0000478,7.55e-21,24;UBERON:0000305,1.25e-16,7;UBERON:0001949,2.82e-15,3;UBERON:0004871,1.62e-14,8;UBERON:0004923,3.97e-14,66;UBERON:0000920,4.08e-14,3;UBERON:0001708,2.97e-11,4;UBERON:0008895,2.97e-11,4;UBERON:0001987,1.01e-10,4;UBERON:0004340,1.01e-10,4;UBERON:0001911,1.55e-10,4;UBERON:0005333,1.55e-10,4;UBERON:0008425,1.55e-10,4;UBERON:0005311,1.55e-10,4;UBERON:0002419,7.62e-10,2;UBERON:0007771,7.62e-10,2;UBERON:0003297,7.62e-10,2;UBERON:0001821,7.62e-10,2;UBERON:0003487,7.62e-10,2;UBERON:0001820,7.62e-10,2;UBERON:0005089,7.62e-10,2;UBERON:0005088,7.62e-10,2;UBERON:0004119,2.29e-09,160;UBERON:0000925,2.29e-09,160;UBERON:0006595,2.29e-09,160;UBERON:0011159,4.35e-09,5;UBERON:0003729,8.57e-09,13;UBERON:0001004,1.12e-08,74;UBERON:0005153,4.40e-08,37;UBERON:0010188,1.23e-07,6;UBERON:0002539,1.23e-07,6;UBERON:0008816,1.23e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,7.42700665242586,9.23184423799587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,2.75826367343678,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.368694602451,7.63689137654337,10.6117700293931,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,5.1582634142054,0,0.301586917234893,1.75918045801206,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,2.81201501960331,12.5986596149145,5.52922879245307,2.5971971583826,2.61570544662566,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72814814301633,3.32870879020994,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2663476097303,0.460404944679482,0,0,0,0.451199612907412,1.07821471946181,0,0,6.22754610467967,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,2.87132768998086,1.95018073810956,0,0,0,0,0,0,0,0,0,3.96683796866347,1.34533047155574,2.16941611240793,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,0.670302275535787,1.08890984861323,0.941438007767792,0.86101074534246,3.36942951335251,0.886860307073351,18.3778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.78852387424529,1.78178808499583,5.22173193568695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,3.50901275705111,3.48070854927077,1.5991043280559,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,3.83060508953771,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,2.75819975547194,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9221734262185,2.04365596629566,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33702242903487,0,0,0,0,0,0,0,0,0,0,0,5.91424344868181,0,0,0,0,0,0,0.496211178389294,0,2.29972369751271,0,0,0,0,0.620916591138472,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,2.52017555398455,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.404112318087525,0.358611026963382,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ITGB6 | |||
}} |
Revision as of 06:14, 21 January 2014
Short description: | p6@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB6_5end |
Coexpression cluster: | C1497_amniotic_Mallassezderived_Prostate_Urothelial_papillotubular_Gingival_Amniotic |
Association with transcript: | 9bp_to_ENST00000428609, uc010fou.2, uc010zcq.1_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | E9PEE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.24e-27 | 19 |
endo-epithelial cell | 7.09e-18 | 42 |
gingival epithelial cell | 2.82e-15 | 3 |
epithelial cell of Malassez | 7.53e-15 | 3 |
epithelial cell | 2.23e-14 | 253 |
placental epithelial cell | 3.90e-14 | 3 |
chorionic membrane mesenchymal stem cell | 4.08e-14 | 3 |
endodermal cell | 4.24e-12 | 58 |
respiratory epithelial cell | 1.57e-11 | 13 |
general ecto-epithelial cell | 2.44e-11 | 14 |
amniotic epithelial cell | 1.15e-10 | 2 |
mammary gland epithelial cell | 1.55e-10 | 4 |
sebum secreting cell | 7.62e-10 | 2 |
epithelial cell of sweat gland | 7.62e-10 | 2 |
epithelial cell of skin gland | 7.62e-10 | 2 |
acinar cell of sebaceous gland | 7.62e-10 | 2 |
amnion mesenchymal stem cell | 7.27e-09 | 5 |
epithelial cell of alimentary canal | 9.50e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.34e-37 | 14 |
membranous layer | 2.34e-37 | 14 |
chorion | 1.26e-22 | 7 |
extraembryonic structure | 7.55e-21 | 24 |
amnion | 1.25e-16 | 7 |
gingival epithelium | 2.82e-15 | 3 |
somatic layer of lateral plate mesoderm | 1.62e-14 | 8 |
organ component layer | 3.97e-14 | 66 |
egg chorion | 4.08e-14 | 3 |
jaw skeleton | 2.97e-11 | 4 |
splanchnocranium | 2.97e-11 | 4 |
placenta | 1.01e-10 | 4 |
allantois | 1.01e-10 | 4 |
mammary gland | 1.55e-10 | 4 |
mammary bud | 1.55e-10 | 4 |
mammary ridge | 1.55e-10 | 4 |
mammary placode | 1.55e-10 | 4 |
skin gland | 7.62e-10 | 2 |
epidermis gland | 7.62e-10 | 2 |
gland of integumental system | 7.62e-10 | 2 |
sebaceous gland | 7.62e-10 | 2 |
skin sebaceous gland | 7.62e-10 | 2 |
sweat gland | 7.62e-10 | 2 |
sweat gland placode | 7.62e-10 | 2 |
sebaceous gland placode | 7.62e-10 | 2 |
endoderm-derived structure | 2.29e-09 | 160 |
endoderm | 2.29e-09 | 160 |
presumptive endoderm | 2.29e-09 | 160 |
primary subdivision of cranial skeletal system | 4.35e-09 | 5 |
mouth mucosa | 8.57e-09 | 13 |
respiratory system | 1.12e-08 | 74 |
epithelial bud | 4.40e-08 | 37 |
protuberance | 1.23e-07 | 6 |
pharyngeal arch | 1.23e-07 | 6 |
embryonic head | 1.23e-07 | 6 |