FFCP PHASE1:Hg19::chr2:47596330..47596380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |||
|TSSclassifier=strong | |||
|UniProt=P16422 | |||
|association_with_transcript=43bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | |||
|coexpression_cluster_id=C4235 | |||
|description=CAGE_peak_2_at_EPCAM_5end | |||
|id=chr2:47596330..47596380,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-22!254;CL:0000223!3.35e-09!59;CL:0002076!5.70e-08!43;CL:1000497!4.78e-07!18;CL:0002518!4.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.23e-09;17!CL:0002518;5.23e-09;17!CL:0000039;3.61e-08;7!CL:0000586;3.61e-08;7!CL:1000507;3.66e-08;10!CL:1000494;3.66e-08;10!CL:1000449;8.05e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.06e-21,253;CL:1000497,5.76e-09,17;CL:0002518,5.76e-09,17;CL:0000223,2.41e-08,58;CL:1000507,3.21e-08,10;CL:1000494,3.21e-08,10;CL:0000039,3.85e-08,7;CL:0000586,3.85e-08,7;CL:1000449,8.65e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.53e-13;30!UBERON:0006595;4.32e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.98e-34!106;DOID:0050687!2.52e-28!143;DOID:299!1.11e-14!25;DOID:162!7.55e-14!235;DOID:14566!8.81e-14!239;DOID:1749!1.68e-07!14;DOID:7!6.59e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;3.63e-17;25!DOID:305;1.15e-13;106!DOID:0050615;4.22e-08;16!DOID:1749;1.14e-07;14!DOID:0050687;1.97e-07;143!DOID:3119;2.46e-07;14!DOID:1324;3.77e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.38e-42,106;DOID:0050687,1.57e-31,143;DOID:162,1.51e-18,235;DOID:14566,1.43e-17,239;DOID:299,3.26e-17,25;DOID:0050686,3.47e-08,137;DOID:0050615,4.35e-08,16;DOID:1749,7.84e-08,14;DOID:3119,2.18e-07,14;DOID:1324,3.90e-07,15;DOID:7,6.18e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.88e-13!155;UBERON:0001555!4.88e-13!155;UBERON:0007026!4.88e-13!155;UBERON:0005177!2.95e-12!107;UBERON:0004119!5.95e-12!169;UBERON:0000925!5.95e-12!169;UBERON:0006595!5.95e-12!169;UBERON:0004921!1.33e-11!129;UBERON:0004185!1.33e-11!129;UBERON:0000466!4.72e-11!126;UBERON:0005911!6.64e-11!82;UBERON:0000464!2.06e-10!104;UBERON:0000062!5.75e-10!511;UBERON:0000481!2.58e-09!347;UBERON:0000489!5.12e-09!32;UBERON:0005153!8.48e-09!37;UBERON:0006554!8.89e-09!44;UBERON:0002113!1.02e-08!27;UBERON:0003918!1.02e-08!27;UBERON:0005095!1.02e-08!27;UBERON:0007687!1.02e-08!27;UBERON:0009569!1.88e-08!113;UBERON:0005172!1.98e-08!55;UBERON:0005173!1.98e-08!55;UBERON:0005409!2.45e-08!35;UBERON:0001008!2.47e-08!45;UBERON:0000064!2.59e-08!219;UBERON:0003064!5.86e-08!37;UBERON:0000058!1.08e-07!26;UBERON:0000077!1.45e-07!130;UBERON:0000080!3.50e-07!18;UBERON:0002120!3.50e-07!18;UBERON:0004875!3.50e-07!18;UBERON:0005721!3.50e-07!18;UBERON:0005754!3.50e-07!18;UBERON:0007297!3.50e-07!18;UBERON:0000160!3.73e-07!27;UBERON:0002048!4.11e-07!22;UBERON:0000117!4.11e-07!22;UBERON:0000171!4.11e-07!22;UBERON:0000170!4.11e-07!22;UBERON:0005597!4.11e-07!22;UBERON:0000118!4.11e-07!22;UBERON:0006555!9.27e-07!17;UBERON:0005103!9.27e-07!17;UBERON:0000083!9.27e-07!17;UBERON:0009201!9.27e-07!17;UBERON:0004819!9.27e-07!17;UBERON:0006553!9.27e-07!17;UBERON:0003074!9.27e-07!17;UBERON:0003060!9.27e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.99e-11;22!UBERON:0004921;1.37e-09;33!UBERON:0000160;1.01e-08;17!UBERON:0002113;1.38e-08;24!UBERON:0011143;1.38e-08;24!UBERON:0004211;3.66e-08;10!UBERON:0009773;3.66e-08;10!UBERON:0001231;3.66e-08;10!UBERON:0004810;3.66e-08;10!UBERON:0002048;5.10e-08;22!UBERON:0000117;5.10e-08;22!UBERON:0000171;5.10e-08;22!UBERON:0000170;5.10e-08;22!UBERON:0006555;8.05e-08;15!UBERON:0004819;8.05e-08;15!UBERON:0001285;8.05e-08;15!UBERON:0007684;8.05e-08;15!UBERON:0000489;2.85e-07;29!UBERON:0003135;5.15e-07;11!UBERON:0006554;7.14e-07;30!UBERON:0001008;7.14e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.95e-14,101;UBERON:0001007,4.31e-13,145;UBERON:0001555,4.31e-13,145;UBERON:0007026,4.31e-13,145;UBERON:0004921,6.68e-13,118;UBERON:0004119,1.12e-10,160;UBERON:0000925,1.12e-10,160;UBERON:0006595,1.12e-10,160;UBERON:0009569,1.82e-10,112;UBERON:0002113,7.40e-10,26;UBERON:0003918,7.40e-10,26;UBERON:0011143,7.40e-10,26;UBERON:0005095,7.40e-10,26;UBERON:0007687,7.40e-10,26;UBERON:0005911,1.25e-09,82;UBERON:0005409,2.84e-09,25;UBERON:0005172,7.01e-09,54;UBERON:0005173,7.01e-09,54;UBERON:0000160,9.68e-09,17;UBERON:0006555,1.50e-08,16;UBERON:0004819,1.50e-08,16;UBERON:0000489,2.03e-08,31;UBERON:0004810,3.21e-08,10;UBERON:0002048,5.61e-08,22;UBERON:0000117,5.61e-08,22;UBERON:0000171,5.61e-08,22;UBERON:0000170,5.61e-08,22;UBERON:0005597,5.61e-08,22;UBERON:0000118,5.61e-08,22;UBERON:0004211,8.65e-08,15;UBERON:0009773,8.65e-08,15;UBERON:0001231,8.65e-08,15;UBERON:0001285,8.65e-08,15;UBERON:0007684,8.65e-08,15;UBERON:0004208,8.65e-08,15;UBERON:0005153,1.35e-07,37;UBERON:0002417,3.28e-07,60;UBERON:0000916,3.28e-07,60;UBERON:0006554,3.54e-07,47;UBERON:0003135,5.09e-07,11;UBERON:0001008,6.78e-07,48 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,2.21160542851358,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.10864698731282,1.05401742831751,3.53643503843824,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.337834441449967,0,0,0,0,0,1.74437620857014,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0.860413786167011,9.02605425359006,10.6023814657188,9.52790331530051,9.32949495138334,8.07426722802011,14.5990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9402195356395,0.171567810298526,0.109750285408626,1.1240175325762,0.804231779293047,1.48141512253647,0,0,0,1.85488647960123,0.234817388471643,0,0,0,2.37061319387782,11.1603201072333,0,0,0,0.93733833986777,0,2.1266264586358,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6553277166909,0.601519410909855,1.47329582297434,0.114814448164607,0.182091168006717,0,8.12159303233341,10.7051318575137,3.92174884588428,5.84556898613043,12.1384373226807,1.13733384070897,0.170093705276516,1.0795795805107,0,0.812839312631559,4.51520796469368,9.17554582962138,7.47968408035852,6.94011739638753,0.438519753291869,0.261435451024901,3.33385162651306,1.96808787419823,2.60302715731442,1.44257416306811,2.1060976908219,2.39277549769705,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.495854746082934,0.384380134730212,0,1.0115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.48111056362756,0,0,0.941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,4.90080431962063,0,0,0,0,0,0,0,18.5034505956497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.029789177148,0,0.121360521749513,0,0,2.62618933211459,2.96964680832639,0.307160702099232,0,1.26602474769461,0.333926115068718,0,4.22250816255987,0.796991953004279,6.3545300572164,22.6739473068848,0,0,0,4.40354920621902,1.9692329214317,0,0.394573622547734,0,0,0,0,0,6.77112178821606,6.82187999970327,0,4.09656413827799,8.39037045966129,5.2005289988946,6.89486746482929,0,0,1.77148277162768,2.17073589525734,1.52581736317083,0,0.591095237907095,0.658156191461918,0,3.20674611840788,0.615602068030377,0,5.99466151408956,6.19327746427428,18.1441111109753,0.31900115973192,0.641183153813036,1.06606955203727,0,0.31396051279005,1.16348177330109,11.7309743520934,13.528314867924,13.0900837841157,9.29793290348507,12.5559897394499,5.27495161320068,9.46750287323057,25.1608467152415,0.649165919226273,24.8815482769626,14.860870836561,39.105929275752,0,0,0.104421949505455,0.067401132980677,0,0,0,6.06560318689478,0,5.12959723704208,18.1486074072996,0.91821828489147,0,0.751617097072463,2.90326935912292,0,0,0.941798755221676,0,36.1454123457837,0,19.6122504318698,1.95984794828755,4.96237477508295,6.46488672495512,0.171986032471617,1.06431964417994,0.877071805034227,0.985385484638511,0.387956065953678,0.441280633457501,0.451961481561065,0,0.19871461170299,0.316553979779393,8.21315807486173,13.6269994427607,4.0556069000477,2.79733453414982,9.94223878363331,0,11.1536748610277,15.1257537887557,2.36079817574322,1.88555227693436,0.135904206073614,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,6.7890860169657,0,0,0.201550417460179,0,18.6393519243926,13.5507073568425,13.845864208036,15.9072363495876,3.14967940847196,0,1.59045937961861,0.544813624446302,9.96669520483119,13.8914830963206,14.1249714929923,14.398329059296,8.51182150013745,0.242998226632099,1.34173875039706,8.19579355911661,8.81237080667968,5.28001682597032,0,6.33320151154169,0,0,0,0,0,0.326587360109409,0,9.11226980317663,0,0.226624183040251,0.146552233678082,3.97520666736664,0.517131825446202,0.52893040697076,1.36869470307464,7.75296524548339,3.09683496446315,8.80344108558129,7.04206394090232,0,0,0,1.91502377331055,0,0,0,0,15.2342473362727,0.886068179966986,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0.138348634936231,0.124980407962107,0,0.285465333544967,0.235265819698172,18.7333962322753,10.2893930313686,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0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| |||
|short_description=p2@EPCAM | |||
}} |
Revision as of 03:01, 21 January 2014
Short description: | p2@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPCAM_5end |
Coexpression cluster: | C4235_nonsmall_endometrial_colon_small_tubular_argyrophil_Prostate |
Association with transcript: | 43bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | P16422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.06e-21 | 253 |
kidney cell | 5.76e-09 | 17 |
kidney epithelial cell | 5.76e-09 | 17 |
endodermal cell | 2.41e-08 | 58 |
kidney tubule cell | 3.21e-08 | 10 |
nephron tubule epithelial cell | 3.21e-08 | 10 |
germ line cell | 3.85e-08 | 7 |
germ cell | 3.85e-08 | 7 |
epithelial cell of nephron | 8.65e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.38e-42 | 106 |
cell type cancer | 1.57e-31 | 143 |
cancer | 1.51e-18 | 235 |
disease of cellular proliferation | 1.43e-17 | 239 |
adenocarcinoma | 3.26e-17 | 25 |
organ system cancer | 3.47e-08 | 137 |
respiratory system cancer | 4.35e-08 | 16 |
squamous cell carcinoma | 7.84e-08 | 14 |
gastrointestinal system cancer | 2.18e-07 | 14 |
lung cancer | 3.90e-07 | 15 |
disease of anatomical entity | 6.18e-07 | 39 |