FFCP PHASE1:Hg19::chr2:21231178..21231190,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=not | |||
|UniProt=Q59HB3 | |||
|association_with_transcript=-281bp_to_AB208846_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_14_at_APOB_5end | |||
|id=chr2:21231178..21231190,- | |||
|ontology_enrichment_celltype=CL:0000181!9.56e-28!12;CL:0000417!9.56e-28!12;CL:0000668!9.56e-28!12;CL:0000414!9.56e-28!12;CL:0000412!9.56e-28!12;CL:0000182!9.56e-28!12;CL:0000223!4.80e-09!59;CL:0002322!6.24e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.12e-46;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.93e-46,12;CL:0000223,2.15e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.89e-35;11!UBERON:0009497;1.49e-29;13!UBERON:0001041;7.23e-13;30!UBERON:0003104;1.97e-12;31!CL:0000223;3.40e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.68e-30!19;UBERON:0006925!1.68e-30!19;UBERON:0008836!1.68e-30!19;UBERON:0008835!3.23e-26!22;UBERON:0003894!3.23e-26!22;UBERON:0009854!4.90e-25!23;UBERON:0007499!5.88e-23!25;UBERON:0009497!5.88e-23!25;UBERON:0000015!5.88e-23!25;UBERON:0002423!5.88e-23!25;UBERON:0006235!5.88e-23!25;UBERON:0004161!5.88e-23!25;UBERON:0005057!4.88e-22!26;UBERON:0009856!4.88e-22!26;UBERON:0002365!2.51e-18!31;UBERON:0002330!2.51e-18!31;UBERON:0002368!4.05e-16!35;UBERON:0003929!1.21e-15!54;UBERON:0004921!2.05e-13!129;UBERON:0004185!2.05e-13!129;UBERON:0000949!2.60e-12!45;UBERON:0002530!1.69e-11!59;UBERON:0001007!9.34e-11!155;UBERON:0001555!9.34e-11!155;UBERON:0007026!9.34e-11!155;UBERON:0002084!3.01e-10!1;UBERON:0002082!3.01e-10!1;UBERON:0004706!3.01e-10!1;UBERON:0005172!6.93e-10!55;UBERON:0005173!6.93e-10!55;UBERON:0005911!8.76e-10!82;UBERON:0004119!1.17e-09!169;UBERON:0000925!1.17e-09!169;UBERON:0006595!1.17e-09!169;UBERON:0002417!8.23e-09!61;UBERON:0000916!8.23e-09!61;UBERON:0005409!1.23e-08!35;UBERON:0000160!5.42e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.12e-51;19!UBERON:0006925;4.12e-51;19!UBERON:0002423;9.40e-39;25!UBERON:0002365;5.56e-30;31!UBERON:0002330;5.56e-30;31!UBERON:0002108;1.06e-27;4!UBERON:0002368;1.87e-26;33!UBERON:0000949;2.35e-19;43!UBERON:0005172;1.42e-11;52!UBERON:0005173;1.42e-11;52!UBERON:0001007;5.61e-11;81!UBERON:0002417;3.57e-10;58!UBERON:0000916;3.57e-10;58!UBERON:0002530;4.49e-10;57!UBERON:0000160;3.70e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.99e-51,19;UBERON:0006925,3.99e-51,19;UBERON:0008836,3.99e-51,19;UBERON:0008835,4.19e-44,22;UBERON:0003894,4.19e-44,22;UBERON:0009854,3.60e-42,23;UBERON:0007499,9.17e-39,25;UBERON:0009497,9.17e-39,25;UBERON:0000015,9.17e-39,25;UBERON:0002423,9.17e-39,25;UBERON:0006235,9.17e-39,25;UBERON:0004161,9.17e-39,25;UBERON:0009856,2.95e-37,26;UBERON:0002365,3.54e-31,31;UBERON:0002330,3.54e-31,31;UBERON:0002108,1.01e-27,4;UBERON:0002368,1.46e-27,35;UBERON:0000949,2.53e-21,45;UBERON:0003929,1.12e-17,54;UBERON:0005172,1.12e-17,54;UBERON:0005173,1.12e-17,54;UBERON:0002530,3.96e-16,59;UBERON:0002417,7.52e-16,60;UBERON:0000916,7.52e-16,60;UBERON:0004921,1.34e-14,118;UBERON:0001007,1.05e-11,145;UBERON:0001555,1.05e-11,145;UBERON:0007026,1.05e-11,145;UBERON:0005911,1.99e-11,82;UBERON:0001041,9.84e-11,87;UBERON:0004119,1.63e-10,160;UBERON:0000925,1.63e-10,160;UBERON:0006595,1.63e-10,160;UBERON:0005177,3.77e-09,101;UBERON:0009569,3.51e-08,112;UBERON:0000160,3.65e-08,17;UBERON:0003914,8.44e-08,117;UBERON:0005256,1.89e-07,122;UBERON:0011216,4.04e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5483559197112,12.7767538168091,6.49868897349544,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,7.79953504841514,10.2195664392646,6.94256501698104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,7.18105945022604,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70109553377806,3.49695296806332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@APOB | |||
}} |
Revision as of 01:59, 21 January 2014
Short description: | p14@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_14_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -281bp_to_AB208846_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q59HB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.93e-46 | 12 |
endodermal cell | 2.15e-09 | 58 |