FFCP PHASE1:Hg19::chr17:42984643..42984662,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=42bp_to_BC012228_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_10_at_GFAP_5end | |||
|id=chr17:42984643..42984662,- | |||
|ontology_enrichment_celltype=CL:0002605!4.93e-10!3;CL:0000047!7.35e-09!8;CL:0002319!2.69e-07!25;CL:0000128!3.10e-07!7;CL:0000126!3.10e-07!7;CL:0000127!3.10e-07!7;CL:0002453!3.10e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.44e-12;3!CL:0000128;3.84e-09;7!CL:0000126;3.84e-09;7!CL:0000127;3.84e-09;7!CL:0000047;1.94e-08;2!CL:0002319;7.98e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.39e-12,3;CL:0000128,3.44e-09,7;CL:0000126,3.44e-09,7;CL:0000127,3.44e-09,7;CL:0002453,3.44e-09,7;CL:0002319,8.41e-08,25;CL:0000047,1.43e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.76e-19;82!UBERON:0006241;6.70e-14;3!UBERON:0003057;6.70e-14;3!UBERON:0010122;4.04e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@GFAP | |||
}} |
Revision as of 15:45, 20 January 2014
Short description: | p10@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 42bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.39e-12 | 3 |
oligodendrocyte | 3.44e-09 | 7 |
macroglial cell | 3.44e-09 | 7 |
astrocyte | 3.44e-09 | 7 |
oligodendrocyte precursor cell | 3.44e-09 | 7 |
neural cell | 8.41e-08 | 25 |
neuronal stem cell | 1.43e-07 | 8 |