FFCP PHASE1:Hg19::chr17:38632693..38632717,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:38632693..38632717,- | |||
|id=chr17:38632693..38632717,- | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-28!254;CL:0002076!1.23e-24!43;CL:0000223!8.22e-20!59;CL:0002251!7.82e-16!21;CL:0002368!1.89e-10!13;CL:0002159!1.74e-08!13;CL:0000622!2.30e-08!5;CL:0000244!5.77e-07!4;CL:0000731!5.77e-07!4;CL:0000154!7.79e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.12e-20;42!CL:0002368;1.61e-16;13!CL:0002251;1.39e-14;20!CL:0002159;1.35e-12;14!CL:0000622;1.42e-12;5!CL:0000349;1.37e-10;19!CL:0000154;2.14e-10;6!CL:0000244;2.88e-10;4!CL:0000731;2.88e-10;4!CL:0002202;8.95e-09;9!CL:0002632;8.95e-09;9!CL:0002623;1.48e-08;3!CL:0002328;5.75e-08;3!CL:0002541;1.59e-07;3!CL:0002621;1.71e-07;3!CL:0002577;2.17e-07;3!CL:0000240;5.40e-07;6!CL:0000311;5.40e-07;6!CL:0000079;5.40e-07;6!CL:0000237;5.40e-07;6!CL:0000150;9.22e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.78e-30,253;CL:0002076,1.59e-26,42;CL:0000223,7.74e-19,58;CL:0002368,1.36e-16,13;CL:0002251,1.60e-14,20;CL:0000622,1.72e-12,5;CL:0002159,1.80e-12,14;CL:0000349,1.42e-10,19;CL:0000154,2.51e-10,6;CL:0000244,2.99e-10,4;CL:0000731,2.99e-10,4;CL:0002202,7.48e-09,9;CL:0002632,7.48e-09,9;CL:0002623,1.41e-08,3;CL:0002328,5.69e-08,3;CL:0002541,1.62e-07,3;CL:0002621,1.98e-07,3;CL:0002577,2.32e-07,3;CL:0000076,2.93e-07,63;CL:0000240,6.36e-07,6;CL:0000311,6.36e-07,6;CL:0000079,6.36e-07,6;CL:0000237,6.36e-07,6;CL:0000036,6.36e-07,6;CL:0000357,6.36e-07,6;CL:0000114,6.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;2.90e-11;58!UBERON:0008947;2.98e-09;29!CL:0000357;5.40e-07;6!CL:0000114;5.40e-07;6 | |||
|ontology_enrichment_disease=DOID:305!8.13e-15!106;DOID:0050687!2.79e-08!143;DOID:1749!8.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.59e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.66e-09,14;DOID:305,1.00e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.21e-27!169;UBERON:0000925!3.21e-27!169;UBERON:0006595!3.21e-27!169;UBERON:0001004!2.02e-21!72;UBERON:0000077!7.84e-19!130;UBERON:0001007!2.20e-18!155;UBERON:0001555!2.20e-18!155;UBERON:0007026!2.20e-18!155;UBERON:0000161!2.23e-16!35;UBERON:0004921!6.26e-15!129;UBERON:0004185!6.26e-15!129;UBERON:0001041!2.16e-14!98;UBERON:0000065!3.45e-14!53;UBERON:0000166!2.40e-13!21;UBERON:0001557!2.61e-12!19;UBERON:0000072!7.83e-12!46;UBERON:0001737!9.78e-12!9;UBERON:0005631!1.60e-11!14;UBERON:0000158!1.60e-11!14;UBERON:0000165!2.07e-10!28;UBERON:0000930!2.07e-10!28;UBERON:0003124!5.24e-10!7;UBERON:0008947!9.72e-09!38;UBERON:0003258!9.72e-09!38;UBERON:0001044!1.40e-08!6;UBERON:0003293!1.40e-08!6;UBERON:0003294!1.40e-08!6;UBERON:0010047!1.40e-08!6;UBERON:0000167!1.40e-08!6;UBERON:0005911!1.60e-08!82;UBERON:0000344!5.72e-08!12;UBERON:0000365!7.55e-08!5;UBERON:0003102!1.06e-07!95;UBERON:0003408!1.23e-07!10;UBERON:0002530!1.33e-07!59;UBERON:0003729!1.50e-07!5;UBERON:0004923!7.54e-07!57;UBERON:0000062!8.58e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-17;9!UBERON:0001557;1.47e-17;9!UBERON:0000065;1.13e-14;44!UBERON:0001004;1.04e-13;65!UBERON:0000072;3.56e-12;37!UBERON:0005631;3.63e-11;10!UBERON:0000158;3.63e-11;10!UBERON:0000161;2.30e-10;19!UBERON:0000166;2.30e-10;19!UBERON:0000478;1.32e-09;24!UBERON:0001987;2.87e-09;4!UBERON:0000486;7.09e-09;12!UBERON:0000365;3.41e-08;5!UBERON:0004815;5.75e-08;3!UBERON:0002031;5.75e-08;3!UBERON:0000165;6.71e-08;28!UBERON:0003729;7.35e-08;13!UBERON:0003124;1.59e-07;3!UBERON:0000920;1.59e-07;3!UBERON:0001949;1.71e-07;3!UBERON:0005910;8.29e-07;6!UBERON:0001044;9.01e-07;6!UBERON:0003293;9.01e-07;6!UBERON:0003294;9.01e-07;6!UBERON:0010047;9.01e-07;6!UBERON:0003408;9.01e-07;6!UBERON:0000167;9.01e-07;6!UBERON:0005911;9.09e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.58e-22,74;UBERON:0004119,3.62e-21,160;UBERON:0000925,3.62e-21,160;UBERON:0006595,3.62e-21,160;UBERON:0005631,2.50e-18,14;UBERON:0000158,2.50e-18,14;UBERON:0001737,6.66e-18,9;UBERON:0000065,8.98e-16,54;UBERON:0003124,3.99e-15,7;UBERON:0008947,3.79e-14,38;UBERON:0003258,3.79e-14,38;UBERON:0000072,5.86e-12,47;UBERON:0001007,3.14e-11,145;UBERON:0001555,3.14e-11,145;UBERON:0007026,3.14e-11,145;UBERON:0001041,2.54e-10,87;UBERON:0000478,1.31e-09,24;UBERON:0001557,2.15e-09,19;UBERON:0001987,2.78e-09,4;UBERON:0004340,2.78e-09,4;UBERON:0000166,1.43e-08,22;UBERON:0003102,2.65e-08,99;UBERON:0004921,3.18e-08,118;UBERON:0000365,3.52e-08,5;UBERON:0000161,3.90e-08,36;UBERON:0004815,5.69e-08,3;UBERON:0002031,5.69e-08,3;UBERON:0004923,7.12e-08,66;UBERON:0003729,8.33e-08,13;UBERON:0000920,1.62e-07,3;UBERON:0000165,1.78e-07,29;UBERON:0000930,1.78e-07,29;UBERON:0001949,1.98e-07,3;UBERON:0005153,8.26e-07,37;UBERON:0005910,8.49e-07,6;UBERON:0005157,8.72e-07,47 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,8.51921351307672,10.0231451726812,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,4.59710612239464,5.72291245678675,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28543450377605,6.00041465299836,1.43402297694502,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,2.72105640091641,1.34867752062481,2.41011029883482,2.97793726377464,1.96091499683166,1.66089433377768,1.8876383142423,2.35465758150415,1.92373578473195,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,17.1210445237456,1.1240175325762,33.8782637027196,15.9252125672671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74296343553385,5.52922879245307,34.3904727178937,22.960081142603,8.81780162079986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,6.65741758041988,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,11.4288688072872,15.8379300969742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,1.14853107599234,13.0012049207304,0,0,0.154048617114644,0,0,0,0,0,0,6.61139661443912,7.11103249250893,7.14631189969671,3.2370489873776,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90732774900111,2.68120910214315,0,0.941438007767792,7.74909670808214,6.73885902670502,3.10401107475673,6.20253180558791,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,4.53614521001611,0,8.90766036087773,0,0,0,1.31843099381408,0,0.19924798825107,0,0,0,0,0,1.43789361835723,0.895105873378046,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,4.21035758656349,1.77977555204936,1.89110145414349,0,0,0,0,0,0,0,0,0,0.21787692703798,3.20674611840788,0.153900517007594,0,0,0,0,2.23300811812344,1.64875668123352,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0,0.17472666824203,0,0.483781656445426,0.584714536689484,1.23173185579814,0.581934098930517,0,0.451961481561065,0.411125773940253,0,0,4.10657903743086,0.0801588202515337,0,2.19790570540343,0.288180834308212,0,0,6.05030151550229,0,9.89914945390541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,3.86900977278975,0,5.36695500158826,0.0788057072991982,0,0,0,1.91915197319445,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8743926468253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,1.46842022703881,0,7.41123473186333,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,4.01493034381391,0,0,0,0,0,0.979156554036111,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0.589848616738702,6.42000094825876,2.07946199070609,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,1.98484471355718,0,0.255524855279191,0,0,0,0,2.7497734750418,0,0,0,0,0.945550727071746,4.89418168325104,0.39246546425257,0,0,0,0,0,0,0,0,0,0,16.784509297206,8.02376842341565,6.91259661814092,0.430227358820278,0,0,0.423387050190929,0.9164274741762,0,0,0,0.196300467230486,0.121917924982269,0,0,0,1.45713297917742,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,1.78553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,1.61693751166575,0.217716747896961,0.342233301085281,0.471464371102113,0.430333232356058,1.66330178273007,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:38632693..38632717,- | |||
}} |
Revision as of 15:11, 20 January 2014
Short description: | p@chr17:38632693..38632717, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38632693..38632717, - |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.78e-30 | 253 |
endo-epithelial cell | 1.59e-26 | 42 |
endodermal cell | 7.74e-19 | 58 |
respiratory epithelial cell | 1.36e-16 | 13 |
epithelial cell of alimentary canal | 1.60e-14 | 20 |
acinar cell | 1.72e-12 | 5 |
general ecto-epithelial cell | 1.80e-12 | 14 |
extraembryonic cell | 1.42e-10 | 19 |
protein secreting cell | 2.51e-10 | 6 |
transitional epithelial cell | 2.99e-10 | 4 |
urothelial cell | 2.99e-10 | 4 |
epithelial cell of tracheobronchial tree | 7.48e-09 | 9 |
epithelial cell of lower respiratory tract | 7.48e-09 | 9 |
acinar cell of salivary gland | 1.41e-08 | 3 |
bronchial epithelial cell | 5.69e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.62e-07 | 3 |
gingival epithelial cell | 1.98e-07 | 3 |
placental epithelial cell | 2.32e-07 | 3 |
squamous epithelial cell | 2.93e-07 | 63 |
stratified squamous epithelial cell | 6.36e-07 | 6 |
keratin accumulating cell | 6.36e-07 | 6 |
stratified epithelial cell | 6.36e-07 | 6 |
keratinizing barrier epithelial cell | 6.36e-07 | 6 |
epithelial fate stem cell | 6.36e-07 | 6 |
stratified epithelial stem cell | 6.36e-07 | 6 |
surface ectodermal cell | 6.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.58e-22 | 74 |
endoderm-derived structure | 3.62e-21 | 160 |
endoderm | 3.62e-21 | 160 |
presumptive endoderm | 3.62e-21 | 160 |
extraembryonic membrane | 2.50e-18 | 14 |
membranous layer | 2.50e-18 | 14 |
larynx | 6.66e-18 | 9 |
respiratory tract | 8.98e-16 | 54 |
chorion | 3.99e-15 | 7 |
respiratory primordium | 3.79e-14 | 38 |
endoderm of foregut | 3.79e-14 | 38 |
segment of respiratory tract | 5.86e-12 | 47 |
digestive system | 3.14e-11 | 145 |
digestive tract | 3.14e-11 | 145 |
primitive gut | 3.14e-11 | 145 |
foregut | 2.54e-10 | 87 |
extraembryonic structure | 1.31e-09 | 24 |
upper respiratory tract | 2.15e-09 | 19 |
placenta | 2.78e-09 | 4 |
allantois | 2.78e-09 | 4 |
oral opening | 1.43e-08 | 22 |
surface structure | 2.65e-08 | 99 |
subdivision of digestive tract | 3.18e-08 | 118 |
urothelium | 3.52e-08 | 5 |
orifice | 3.90e-08 | 36 |
lower respiratory tract epithelium | 5.69e-08 | 3 |
epithelium of bronchus | 5.69e-08 | 3 |
organ component layer | 7.12e-08 | 66 |
mouth mucosa | 8.33e-08 | 13 |
egg chorion | 1.62e-07 | 3 |
mouth | 1.78e-07 | 29 |
stomodeum | 1.78e-07 | 29 |
gingival epithelium | 1.98e-07 | 3 |
epithelial bud | 8.26e-07 | 37 |
transitional epithelium | 8.49e-07 | 6 |
epithelial fold | 8.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.66e-09 | 14 |
carcinoma | 1.00e-08 | 106 |