FFCP PHASE1:Hg19::chr16:81679223..81679271,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr16:81679223..81679271,+ | |||
|id=chr16:81679223..81679271,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.74e-07!3;CL:0002577!2.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.96e-34;19!CL:0002577;7.16e-22;3!CL:0002536;6.67e-15;2!CL:0002537;1.08e-12;5!CL:0002541;7.67e-10;3!CL:0002553;4.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.16e-34,19;CL:0002577,6.92e-22,3;CL:0002536,7.40e-15,2;CL:0002537,7.68e-13,5;CL:0002541,7.18e-10,3;CL:0002553,4.40e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.59e-26!115;UBERON:0001049!2.01e-21!57;UBERON:0005068!2.01e-21!57;UBERON:0006241!2.01e-21!57;UBERON:0007135!2.01e-21!57;UBERON:0001017!1.59e-18!82;UBERON:0005743!2.99e-18!86;UBERON:0002616!1.63e-17!59;UBERON:0003075!3.03e-17!86;UBERON:0007284!3.03e-17!86;UBERON:0002780!3.52e-17!41;UBERON:0001890!3.52e-17!41;UBERON:0006240!3.52e-17!41;UBERON:0000955!3.60e-17!69;UBERON:0006238!3.60e-17!69;UBERON:0003080!1.29e-16!42;UBERON:0002346!5.13e-16!90;UBERON:0000073!1.55e-15!94;UBERON:0001016!1.55e-15!94;UBERON:0000153!2.25e-14!129;UBERON:0007811!2.25e-14!129;UBERON:0002020!2.42e-14!34;UBERON:0003528!2.42e-14!34;UBERON:0004121!3.69e-14!169;UBERON:0001893!4.20e-14!34;UBERON:0003056!1.47e-13!61;UBERON:0000924!1.63e-13!173;UBERON:0006601!1.63e-13!173;UBERON:0005631!2.36e-13!14;UBERON:0000158!2.36e-13!14;UBERON:0002791!3.95e-13!33;UBERON:0000033!5.08e-13!123;UBERON:0001869!3.65e-12!32;UBERON:0002619!3.25e-11!22;UBERON:0001950!6.42e-11!20;UBERON:0002298!1.05e-09!8;UBERON:0000956!1.63e-09!25;UBERON:0000203!1.63e-09!25;UBERON:0000062!3.03e-09!511;UBERON:0001871!1.40e-07!7;UBERON:0000064!1.50e-07!219;UBERON:0003124!1.62e-07!7;UBERON:0000305!1.90e-07!7;UBERON:0002420!8.17e-07!9;UBERON:0007245!8.17e-07!9;UBERON:0010009!8.17e-07!9;UBERON:0010011!8.17e-07!9;UBERON:0000454!8.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.90e-32;10!UBERON:0000158;2.90e-32;10!UBERON:0000478;9.07e-27;24!UBERON:0000305;3.60e-24;7!UBERON:0001987;1.51e-16;4!UBERON:0000007;3.70e-15;2!UBERON:0003124;7.67e-10;3!UBERON:0000920;7.67e-10;3!UBERON:0001894;2.15e-09;7!UBERON:0003296;5.23e-08;4!UBERON:0010133;5.23e-08;4!UBERON:0001874;8.40e-08;1!UBERON:0001301;8.40e-08;1!UBERON:0002171;8.40e-08;1!UBERON:0006518;8.40e-08;1!UBERON:0008949;8.40e-08;1!UBERON:0000101;8.40e-08;1!UBERON:0002167;8.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.89e-47,14;UBERON:0000158,2.89e-47,14;UBERON:0000478,7.08e-27,24;UBERON:0003124,1.44e-24,7;UBERON:0000305,2.57e-24,7;UBERON:0004871,2.91e-21,8;UBERON:0001987,1.47e-16,4;UBERON:0004340,1.47e-16,4;UBERON:0000007,3.70e-15,2;UBERON:0000920,7.18e-10,3;UBERON:0001894,2.01e-09,7;UBERON:0006222,2.01e-09,7;UBERON:0004923,1.12e-08,66;UBERON:0003296,5.23e-08,4;UBERON:0010133,5.23e-08,4;UBERON:0002171,9.94e-08,1;UBERON:0006518,9.94e-08,1;UBERON:0008949,9.94e-08,1;UBERON:0000101,9.94e-08,1;UBERON:0002167,9.94e-08,1;UBERON:0001301,1.06e-07,1;UBERON:0001874,1.14e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.02415155899396,4.48403862988371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45629628603267,11.6504807657348,14.212343786495,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,2.67268212749375,5.83605333988541,3.97659059106519,0.844016498463076,0,0,0,0.796991953004279,0,3.02319297425131,0.306806047506464,0,0,0,2.14825409610731,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0.762760950878299,0,2.75794698593172,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,1.5950057986596,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0,2.05913997434357,0,0,0,0,0.418411385249333,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.789744236554321,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.58679122091228,0,0,0.427149650270779,1.88645166119599,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.72022758707021,0.221858103073705,0.372578417648301,0,0,0,0,0,0,1.01444720027578,0.149254802886874,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0.352675943690684,0,0.642292250964595,0,0,0.205116364240755,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.526472298444801,0,1.56302802246618,0,0,0,0.202612753855184,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,6.06965604236632,10.9277851848623,0,0,0,0.135939465953663,0.197318320688547,0,0,0,1.09980912941201,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0.795803100645473,0,0,0,0,0.0771741581079447,0.218559560503957,5.17349025997675,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.747906392100062,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0.213233981900981,0.476128862927481,0,0.0620747142958579,0.224263725161227,0,0.606351566874658,0.217716747896961,0,0,2.07994395638761,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:81679223..81679271,+ | |||
}} |
Revision as of 12:27, 20 January 2014
Short description: | p@chr16:81679223..81679271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81679223..81679271, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.16e-34 | 19 |
placental epithelial cell | 6.92e-22 | 3 |
amniotic epithelial cell | 7.40e-15 | 2 |
amnion mesenchymal stem cell | 7.68e-13 | 5 |
chorionic membrane mesenchymal stem cell | 7.18e-10 | 3 |
lung fibroblast | 4.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.89e-47 | 14 |
membranous layer | 2.89e-47 | 14 |
extraembryonic structure | 7.08e-27 | 24 |
chorion | 1.44e-24 | 7 |
amnion | 2.57e-24 | 7 |
somatic layer of lateral plate mesoderm | 2.91e-21 | 8 |
placenta | 1.47e-16 | 4 |
allantois | 1.47e-16 | 4 |
pituitary gland | 3.70e-15 | 2 |
egg chorion | 7.18e-10 | 3 |
diencephalon | 2.01e-09 | 7 |
future diencephalon | 2.01e-09 | 7 |
organ component layer | 1.12e-08 | 66 |
gland of diencephalon | 5.23e-08 | 4 |
neuroendocrine gland | 5.23e-08 | 4 |
lower lobe of right lung | 9.94e-08 | 1 |
right lung lobe | 9.94e-08 | 1 |
lower lobe of lung | 9.94e-08 | 1 |
lobe of lung | 9.94e-08 | 1 |
right lung | 9.94e-08 | 1 |
epididymis | 1.06e-07 | 1 |
putamen | 1.14e-07 | 1 |