FFCP PHASE1:Hg19::chr16:68679173..68679184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZX7 | |||
|association_with_transcript=-19bp_to_ENST00000542274_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_2_at_CDH3_5end | |||
|id=chr16:68679173..68679184,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.19e-52!254;CL:0002076!2.45e-24!43;CL:0000223!2.50e-17!59;CL:0002077!2.17e-14!33;CL:0002368!4.28e-12!13;CL:0002251!5.47e-12!21;CL:0002159!3.93e-11!13;CL:0000076!2.29e-09!62;CL:0002202!4.22e-08!9;CL:0002632!4.22e-08!9;CL:0000147!5.33e-08!14;CL:0000150!5.57e-08!9;CL:0000148!1.33e-07!10;CL:0000541!1.33e-07!10;CL:0000075!3.10e-07!27;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12;CL:0002321!8.73e-07!248;CL:0000039!9.99e-07!7;CL:0000586!9.99e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.18e-28;42!CL:0002251;2.16e-18;20!CL:0002368;7.24e-17;13!CL:0002159;2.59e-12;14!CL:0002077;2.58e-11;34!CL:0002202;3.75e-11;9!CL:0002632;3.75e-11;9!CL:0000039;6.81e-09;7!CL:0000586;6.81e-09;7!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:0000244;4.89e-08;4!CL:0000731;4.89e-08;4!CL:0000622;1.02e-07;5!CL:0000082;1.39e-07;19!CL:0000150;2.23e-07;9!CL:0002322;7.29e-07;5!CL:1000449;8.28e-07;15!CL:0002327;9.03e-07;4!CL:0000240;9.54e-07;6!CL:0000311;9.54e-07;6!CL:0000079;9.54e-07;6!CL:0000237;9.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.80e-56,253;CL:0002076,5.74e-37,42;CL:0000223,1.15e-26,58;CL:0002251,2.18e-18,20;CL:0002368,7.60e-17,13;CL:0002077,6.78e-13,34;CL:0002159,2.17e-12,14;CL:0002202,3.86e-11,9;CL:0002632,3.86e-11,9;CL:0002321,7.54e-11,250;CL:0000076,1.17e-10,63;CL:0000039,6.13e-09,7;CL:0000586,6.13e-09,7;CL:1000507,1.32e-08,10;CL:1000494,1.32e-08,10;CL:0000244,4.94e-08,4;CL:0000731,4.94e-08,4;CL:0000622,1.06e-07,5;CL:0000082,1.34e-07,19;CL:0000150,2.39e-07,9;CL:1000449,8.56e-07,15;CL:0002322,8.77e-07,5;CL:0000240,8.82e-07,6;CL:0000311,8.82e-07,6;CL:0000079,8.82e-07,6;CL:0000237,8.82e-07,6;CL:0000036,8.82e-07,6;CL:0000357,8.82e-07,6;CL:0000114,8.82e-07,6;CL:0002327,9.12e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.27e-13;58!CL:0000357;9.54e-07;6!CL:0000114;9.54e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.19e-19!106;DOID:0050687!1.30e-14!143;DOID:1749!2.32e-12!14;DOID:299!9.45e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-17;14!DOID:299;3.69e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.65e-20,106;DOID:1749,3.23e-17,14;DOID:0050687,4.32e-14,143;DOID:299,3.38e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-15!169;UBERON:0000925!1.43e-15!169;UBERON:0006595!1.43e-15!169;UBERON:0000464!1.01e-14!104;UBERON:0001004!5.03e-13!72;UBERON:0006554!3.08e-12!44;UBERON:0000466!3.93e-12!126;UBERON:0005153!4.43e-12!37;UBERON:0001008!9.44e-12!45;UBERON:0005911!1.59e-11!82;UBERON:0005157!6.50e-11!51;UBERON:0000065!1.85e-10!53;UBERON:0000077!2.91e-10!130;UBERON:0003064!5.02e-10!37;UBERON:0001007!8.03e-10!155;UBERON:0001555!8.03e-10!155;UBERON:0007026!8.03e-10!155;UBERON:0005177!2.92e-09!107;UBERON:0005178!4.85e-09!34;UBERON:0002224!4.85e-09!34;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0005181!1.38e-08!35;UBERON:0000161!2.47e-08!35;UBERON:0009569!2.90e-08!113;UBERON:0003101!3.21e-08!22;UBERON:0000079!3.21e-08!22;UBERON:0000058!6.18e-08!26;UBERON:0000064!7.56e-08!219;UBERON:0004921!9.45e-08!129;UBERON:0004185!9.45e-08!129;UBERON:0000344!1.37e-07!12;UBERON:0002553!2.28e-07!70;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0002048!5.87e-07!22;UBERON:0000117!5.87e-07!22;UBERON:0000171!5.87e-07!22;UBERON:0000170!5.87e-07!22;UBERON:0005597!5.87e-07!22;UBERON:0000118!5.87e-07!22;UBERON:0004807!6.57e-07!28;UBERON:0000072!7.12e-07!46;UBERON:0005910!7.24e-07!6;UBERON:0008947!7.40e-07!38;UBERON:0003258!7.40e-07!38;UBERON:0003887!7.64e-07!21;UBERON:0000080!8.35e-07!18;UBERON:0002120!8.35e-07!18;UBERON:0004875!8.35e-07!18;UBERON:0005721!8.35e-07!18;UBERON:0005754!8.35e-07!18;UBERON:0007297!8.35e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;2.06e-11;36!UBERON:0004807;1.36e-10;22!UBERON:0000344;9.13e-10;20!UBERON:0000365;9.10e-09;5!UBERON:0004211;1.25e-08;10!UBERON:0009773;1.25e-08;10!UBERON:0001231;1.25e-08;10!UBERON:0004810;1.25e-08;10!UBERON:0005178;2.69e-08;34!UBERON:0002224;2.69e-08;34!UBERON:0006554;3.86e-08;30!UBERON:0001008;3.86e-08;30!UBERON:0000486;9.94e-08;12!UBERON:0004802;1.39e-07;19!UBERON:0000115;1.39e-07;19!UBERON:0005181;2.04e-07;35!UBERON:0000161;2.70e-07;19!UBERON:0000166;2.70e-07;19!UBERON:0007196;3.03e-07;15!UBERON:0001558;3.03e-07;15!UBERON:0005910;3.49e-07;6!UBERON:0003343;8.19e-07;4!UBERON:0004785;8.19e-07;4!UBERON:0006555;8.28e-07;15!UBERON:0004819;8.28e-07;15!UBERON:0001285;8.28e-07;15!UBERON:0007684;8.28e-07;15!UBERON:0003729;8.78e-07;13!UBERON:0001851;8.85e-07;15!UBERON:0001911;9.03e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.69e-15,160;UBERON:0000925,4.69e-15,160;UBERON:0006595,4.69e-15,160;UBERON:0001004,6.43e-13,74;UBERON:0005153,1.49e-11,37;UBERON:0005157,2.73e-10,47;UBERON:0006554,7.17e-10,47;UBERON:0005911,7.67e-10,82;UBERON:0000344,8.56e-10,20;UBERON:0001007,9.39e-10,145;UBERON:0001555,9.39e-10,145;UBERON:0007026,9.39e-10,145;UBERON:0001008,1.54e-09,48;UBERON:0005178,6.84e-09,34;UBERON:0002224,6.84e-09,34;UBERON:0000365,7.97e-09,5;UBERON:0000065,9.18e-09,54;UBERON:0000161,1.05e-08,36;UBERON:0004807,1.30e-08,28;UBERON:0004810,1.32e-08,10;UBERON:0005181,1.66e-08,35;UBERON:0004921,8.88e-08,118;UBERON:0004802,1.34e-07,19;UBERON:0000115,1.34e-07,19;UBERON:0005177,1.43e-07,101;UBERON:0000915,2.88e-07,52;UBERON:0007196,2.89e-07,15;UBERON:0001558,2.89e-07,15;UBERON:0005910,3.14e-07,6;UBERON:0009569,4.02e-07,112;UBERON:0000166,5.02e-07,22;UBERON:0000033,5.87e-07,56;UBERON:0004211,8.56e-07,15;UBERON:0009773,8.56e-07,15;UBERON:0001231,8.56e-07,15;UBERON:0001285,8.56e-07,15;UBERON:0007684,8.56e-07,15;UBERON:0004208,8.56e-07,15;UBERON:0003343,8.58e-07,4;UBERON:0004785,8.58e-07,4;UBERON:0003729,8.80e-07,13;UBERON:0001911,9.12e-07,4;UBERON:0005333,9.12e-07,4;UBERON:0008425,9.12e-07,4;UBERON:0005311,9.12e-07,4;UBERON:0001851,9.86e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.16041266653169,13.9560233594486,9.61142037372758,11.078213085595,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,5.51652734687356,10.2410012384605,22.554994620174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,26.9578513336481,13.3482399402395,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1129847635543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73043412653187,7.36414525595254,5.44928731239107,3.53723747775827,3.18071443971565,3.25343040034651,2.28054321033815,3.78481276313443,1.82488679537915,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,2.45976877086227,0.171567810298526,9.21902397432455,15.7362454560667,7.13755704122579,14.2586205544136,0,0,0,2.31860809950154,0,0,0,0,5.53143078571493,2.57545848628462,0,0,0,7.49870671894216,8.23112428174412,5.81277898693785,11.9112835194788,7.26584846284905,16.1020725249389,0,0,0,0,0,0.888970520090367,1.90994212779139,2.34434894420094,1.71072446022705,0.308482478109971,3.30377363628309,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,3.86750238693191,9.02279116364782,12.7992574620896,0,0,0.131124414959424,7.21919380651859,3.77375151811632,0.784349769176855,4.38417673959782,3.9054102690364,0,0,0,0,0.541892875087706,1.00337954770971,11.4694322870267,16.6215201785745,5.37299411333228,0,0,1.53870075069834,0.328014645699706,0,1.03041011647722,0,0,16.0794350638928,7.80072295243825,0,0,0,0,0,0,0,0,0,11.7352289906294,10.7626437724459,9.06050258711547,11.0261981132549,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2579871888849,12.0654409596442,8.71127878890581,0.470719003883896,22.386279378904,30.3248656201726,22.1715076768338,12.6347870113828,0,0,0,0,0,0,0,0,0,0,12.4970510150326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.04704323755345,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,1.97710372524119,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,6.77112178821606,1.22443999994674,0,10.5827906905515,9.40738506083235,4.72775363535873,0.689486746482929,0,0,0,0,0,0,0,0,0,6.41349223681575,0.846452843541768,0,2.3056390438806,1.52587995496613,4.56318962072434,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,3.26465616318295,5.65412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0,0,9.19623708980822,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,1.99226682220855,0,2.60339607502696,8.13336898539334,10.6212232028091,0.17472666824203,0,0,0,0,1.84279131327997,0,1.12990370390266,0,0,0,2.73771935828724,6.09207033911656,0.426905989478705,0,4.32271251462318,0,0,0,0,5.89235086541989,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,3.05430982083536,3.16340704173638,2.9080823662043,0.2249738915515,0.77380195455795,0.0607495566580247,7.71499781478312,0.945668487590378,1.20645552710496,3.59041144165982,0,6.71703190618059,0,0,0,0,0,0,0,0,0,1.01980882368113,0,0,0,0,0,7.04815022316672,0.213574825135389,0.314408610199332,0.414239055347196,0.496166021811951,0,0,5.74507131993164,0,0,0,0,2.66991963625398,0,0,0,1.14681839138014,0.887432412294818,0.18628920882415,0,0,0,0.285465333544967,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,5.20073542099719,2.57329909649911,1.04397716786085,0,2.54674721756217,0,0,2.47041157728778,0.877136198314828,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,3.38099397373803,0,0,0,0,0,13.2885532333472,11.1973906805935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.53885150958923,6.1344256140825,5.13600075860701,9.70415595662841,0,0,0,1.0529445968896,0,0,0.785720083444267,0,5.02710693137954,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,9.96546935588843,0,0,0,0.682986574053893,0.443511850813194,0,0,0,0,11.110221043093,1.89093383216518,0.78493092850514,0,5.32517110296199,0,0,0,1.50100742770978,0,0,0,0,4.97318793991288,4.95083583572455,2.07377898544228,0,0,0,0.423387050190929,2.7492824225286,0,0,2.46081949955143,2.7482065412268,0.365753774946808,0,0,0,0.971421986118279,0.467878926924211,0.397901550322736,0,3.3883824611688,0,0.150962843566674,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.0644578879735772,0,10.5346823777338,10.2339512797551,2.80844783412089,0,0,0,0.946629373159108,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.655593431782173,0,3.87557553019531,6.68043513163901,3.58390108185895,2.75778293221613,0.454672189309436,0.2679641301561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| |||
|short_description=p2@CDH3 | |||
}} |
Revision as of 12:02, 20 January 2014
Short description: | p2@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | -19bp_to_ENST00000542274_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | F5GZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.65e-20 | 106 |
squamous cell carcinoma | 3.23e-17 | 14 |
cell type cancer | 4.32e-14 | 143 |
adenocarcinoma | 3.38e-09 | 25 |