FFCP PHASE1:Hg19::chr16:53938772..53938795,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:53938772..53938795,+ | |||
|id=chr16:53938772..53938795,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.04e-25!3;CL:0000861!2.04e-25!3;CL:0000235!5.12e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.85e-14;2!CL:0000575;1.29e-13;2!CL:0002327;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.30e-14,2;CL:0000575,1.21e-13,2;CL:0002327,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.06e-26;1!UBERON:0008801;8.64e-26;1!UBERON:0008425;8.64e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.86e-07;4!DOID:1612;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.04e-07,4;DOID:1612,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!2.90e-18!2;UBERON:0003127!4.46e-18!2;UBERON:0000078!1.67e-16!18;UBERON:0000166!4.40e-14!21;UBERON:0001044!1.45e-13!6;UBERON:0003293!1.45e-13!6;UBERON:0003294!1.45e-13!6;UBERON:0010047!1.45e-13!6;UBERON:0000167!1.45e-13!6;UBERON:0001004!2.69e-12!72;UBERON:0002110!3.01e-12!3;UBERON:0006242!3.01e-12!3;UBERON:0001723!4.22e-12!3;UBERON:0001033!4.22e-12!3;UBERON:0010056!4.22e-12!3;UBERON:0000165!1.91e-10!28;UBERON:0000930!1.91e-10!28;UBERON:0001041!3.08e-10!98;UBERON:0000077!3.76e-10!130;UBERON:0001736!4.46e-10!1;UBERON:0006298!4.46e-10!1;UBERON:0001831!6.31e-10!1;UBERON:0001567!6.31e-10!1;UBERON:0008801!6.31e-10!1;UBERON:0002372!1.25e-09!1;UBERON:0001961!1.25e-09!1;UBERON:0001744!1.25e-09!1;UBERON:0001735!1.25e-09!1;UBERON:0000065!5.13e-09!53;UBERON:0003408!2.45e-08!10;UBERON:0005178!2.56e-08!34;UBERON:0002224!2.56e-08!34;UBERON:0000161!2.95e-08!35;UBERON:0005181!4.57e-08!35;UBERON:0001007!4.76e-08!155;UBERON:0001555!4.76e-08!155;UBERON:0007026!4.76e-08!155;UBERON:0001042!4.76e-08!10;UBERON:0009145!4.76e-08!10;UBERON:0000464!6.02e-08!104;UBERON:0001444!6.72e-08!48;UBERON:0006562!2.33e-07!11;UBERON:0004921!3.22e-07!129;UBERON:0004185!3.22e-07!129;UBERON:0004119!3.49e-07!169;UBERON:0000925!3.49e-07!169;UBERON:0006595!3.49e-07!169;UBERON:0000915!4.47e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.15e-50;2!UBERON:0001044;1.26e-37;6!UBERON:0003293;1.26e-37;6!UBERON:0003294;1.26e-37;6!UBERON:0010047;1.26e-37;6!UBERON:0003408;1.26e-37;6!UBERON:0000167;1.26e-37;6!UBERON:0001736;4.06e-26;1!UBERON:0001831;8.64e-26;1!UBERON:0001567;8.64e-26;1!UBERON:0001041;1.30e-16;14!UBERON:0003127;6.85e-14;2!UBERON:0004089;1.29e-13;2!UBERON:0002365;4.42e-13;31!UBERON:0002330;4.42e-13;31!UBERON:0000161;1.95e-12;19!UBERON:0000166;1.95e-12;19!UBERON:0002110;1.05e-09;3!UBERON:0000165;1.19e-08;28!UBERON:0001911;1.86e-07;4!UBERON:0000964;1.86e-07;4!UBERON:0010409;1.86e-07;4!UBERON:0007811;6.37e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.15e-50,2;UBERON:0001044,1.34e-37,6;UBERON:0003293,1.34e-37,6;UBERON:0003294,1.34e-37,6;UBERON:0010047,1.34e-37,6;UBERON:0000167,1.34e-37,6;UBERON:0001736,3.58e-26,1;UBERON:0006298,3.58e-26,1;UBERON:0001831,9.79e-26,1;UBERON:0001567,9.79e-26,1;UBERON:0008801,9.79e-26,1;UBERON:0003408,6.42e-23,10;UBERON:0003127,6.43e-14,2;UBERON:0004089,1.37e-13,2;UBERON:0002365,3.49e-13,31;UBERON:0002330,3.49e-13,31;UBERON:0000166,7.93e-11,22;UBERON:0002110,1.10e-09,3;UBERON:0006242,1.10e-09,3;UBERON:0001444,1.63e-08,49;UBERON:0000165,2.27e-08,29;UBERON:0000930,2.27e-08,29;UBERON:0000033,1.70e-07,56;UBERON:0000964,1.80e-07,4;UBERON:0010409,1.80e-07,4;UBERON:0004348,1.80e-07,4;UBERON:0005427,1.80e-07,4;UBERON:0001911,2.04e-07,4;UBERON:0005333,2.04e-07,4;UBERON:0008425,2.04e-07,4;UBERON:0005311,2.04e-07,4;UBERON:0002530,4.06e-07,59;UBERON:0002553,6.16e-07,61;UBERON:0000161,7.37e-07,36;UBERON:0000153,8.39e-07,62;UBERON:0007811,8.39e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04951999995435,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.584714536689484,0.574808199372465,0.0969890164884194,0,0,0,0,0,4.49768180290047,0,0.213452994739353,0,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.26940821205835,0.573777643141411,4.65724499164419,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:53938772..53938795,+ | |||
}} |
Revision as of 03:36, 12 January 2014
Short description: | p@chr16:53938772..53938795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:53938772..53938795, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.30e-14 | 2 |
corneal epithelial cell | 1.21e-13 | 2 |
mammary gland epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.15e-50 | 2 |
saliva-secreting gland | 1.34e-37 | 6 |
gland of oral region | 1.34e-37 | 6 |
gland of foregut | 1.34e-37 | 6 |
oral gland | 1.34e-37 | 6 |
oral cavity | 1.34e-37 | 6 |
submandibular gland | 3.58e-26 | 1 |
submandibular gland primordium | 3.58e-26 | 1 |
parotid gland | 9.79e-26 | 1 |
cheek | 9.79e-26 | 1 |
parotid gland primordium | 9.79e-26 | 1 |
gland of gut | 6.42e-23 | 10 |
open tracheal system trachea | 6.43e-14 | 2 |
midface | 1.37e-13 | 2 |
exocrine gland | 3.49e-13 | 31 |
exocrine system | 3.49e-13 | 31 |
oral opening | 7.93e-11 | 22 |
gallbladder | 1.10e-09 | 3 |
gall bladder primordium | 1.10e-09 | 3 |
subdivision of head | 1.63e-08 | 49 |
mouth | 2.27e-08 | 29 |
stomodeum | 2.27e-08 | 29 |
head | 1.70e-07 | 56 |
cornea | 1.80e-07 | 4 |
eye surface | 1.80e-07 | 4 |
optic eminence | 1.80e-07 | 4 |
corneal primordium | 1.80e-07 | 4 |
mammary gland | 2.04e-07 | 4 |
mammary bud | 2.04e-07 | 4 |
mammary ridge | 2.04e-07 | 4 |
mammary placode | 2.04e-07 | 4 |
gland | 4.06e-07 | 59 |
anatomical cavity | 6.16e-07 | 61 |
orifice | 7.37e-07 | 36 |
anterior region of body | 8.39e-07 | 62 |
craniocervical region | 8.39e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.04e-07 | 4 |
breast cancer | 2.04e-07 | 4 |