FFCP PHASE1:Hg19::chr16:3071213..3071278,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1761 | |||
|description=CAGE_peak_at_chr16:3071213..3071278,+ | |||
|id=chr16:3071213..3071278,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.45e-28!246;CL:0002321!1.48e-28!248;CL:0000066!1.93e-28!254;CL:0000548!8.17e-25!679;CL:0000004!8.17e-25!679;CL:0000255!8.17e-25!679;CL:0000012!3.81e-24!682;CL:0000055!5.91e-22!180;CL:0000222!5.57e-16!119;CL:0000144!8.43e-15!625;CL:0000003!6.33e-12!722;CL:0000680!6.21e-11!57;CL:0000056!6.21e-11!57;CL:0000355!6.21e-11!57;CL:0002371!6.94e-11!591;CL:0000393!1.71e-10!60;CL:0000211!1.71e-10!60;CL:0000183!2.13e-10!59;CL:0000192!3.77e-10!42;CL:0000514!3.77e-10!42;CL:0000187!7.67e-10!54;CL:1000497!6.50e-09!18;CL:0002518!6.50e-09!18;CL:0000359!7.87e-09!32;CL:1000449!9.08e-09!16;CL:0000057!1.62e-08!75;CL:0000063!1.25e-07!578;CL:0000077!1.38e-07!19;CL:0000076!3.20e-07!62;CL:1000507!3.56e-07!12;CL:1000494!3.56e-07!12;CL:0002681!8.06e-07!13;CL:0002584!8.06e-07!13;CL:0002076!8.42e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.23e-10;17!CL:0002518;5.23e-10;17!CL:1000449;6.18e-10;15!CL:1000507;9.91e-09;10!CL:1000494;9.91e-09;10!CL:0000359;1.27e-08;32!CL:0000077;6.18e-08;19!CL:0002681;7.98e-08;12!CL:0002584;7.98e-08;12!CL:0000192;3.36e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.48e-28,250;CL:0000066,1.19e-27,253;CL:0000222,1.28e-15,121;CL:0000680,1.50e-10,58;CL:0000056,1.50e-10,58;CL:0000355,1.50e-10,58;CL:0000393,3.90e-10,61;CL:0000211,3.90e-10,61;CL:1000497,4.86e-10,17;CL:0002518,4.86e-10,17;CL:1000449,5.99e-10,15;CL:0000192,1.01e-09,43;CL:0000514,1.01e-09,43;CL:0000187,1.97e-09,55;CL:0000359,6.19e-09,32;CL:0000057,7.71e-09,76;CL:1000507,9.89e-09,10;CL:1000494,9.89e-09,10;CL:0000077,5.81e-08,19;CL:0002681,7.82e-08,12;CL:0002584,7.82e-08,12;CL:0000221,5.92e-07,72;CL:0002076,7.63e-07,42;CL:0000076,9.19e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;3.36e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.98e-20!143;UBERON:0002100!1.73e-19!216;UBERON:0003104!4.67e-17!238;UBERON:0009142!4.67e-17!238;UBERON:0000486!6.00e-16!82;UBERON:0000914!4.34e-15!83;UBERON:0002329!4.34e-15!83;UBERON:0003077!4.34e-15!83;UBERON:0003059!4.34e-15!83;UBERON:0007282!4.34e-15!83;UBERON:0009618!4.34e-15!83;UBERON:0007285!4.34e-15!83;UBERON:0004290!1.57e-13!70;UBERON:0000119!4.78e-13!312;UBERON:0003914!9.18e-13!118;UBERON:0000481!1.27e-12!347;UBERON:0000468!1.29e-12!659;UBERON:0000490!1.42e-12!138;UBERON:0000475!1.57e-12!365;UBERON:0000483!2.02e-12!309;UBERON:0001134!9.70e-12!61;UBERON:0002036!9.70e-12!61;UBERON:0003082!9.70e-12!61;UBERON:0000467!1.99e-11!625;UBERON:0000480!2.53e-11!626;UBERON:0002385!3.81e-11!63;UBERON:0001015!3.81e-11!63;UBERON:0000383!3.81e-11!63;UBERON:0000926!2.76e-09!448;UBERON:0004120!2.76e-09!448;UBERON:0006603!2.76e-09!448;UBERON:0006554!3.96e-09!44;UBERON:0002049!5.04e-09!79;UBERON:0007798!5.04e-09!79;UBERON:0001048!6.70e-09!168;UBERON:0004211!9.08e-09!16;UBERON:0001285!9.08e-09!16;UBERON:0007684!9.08e-09!16;UBERON:0003220!9.08e-09!16;UBERON:0004208!9.08e-09!16;UBERON:0001008!1.78e-08!45;UBERON:0009569!1.96e-08!113;UBERON:0000922!2.23e-08!612;UBERON:0001637!2.83e-08!42;UBERON:0003509!2.83e-08!42;UBERON:0004572!2.83e-08!42;UBERON:0000923!3.23e-08!604;UBERON:0005291!3.23e-08!604;UBERON:0006598!3.23e-08!604;UBERON:0002532!3.23e-08!604;UBERON:0006555!3.61e-08!17;UBERON:0005103!3.61e-08!17;UBERON:0000083!3.61e-08!17;UBERON:0009201!3.61e-08!17;UBERON:0004819!3.61e-08!17;UBERON:0006553!3.61e-08!17;UBERON:0003074!3.61e-08!17;UBERON:0003060!3.61e-08!17;UBERON:0005085!5.23e-08!29;UBERON:0002050!5.26e-08!605;UBERON:0005423!5.26e-08!605;UBERON:0001981!5.73e-08!60;UBERON:0007500!5.73e-08!60;UBERON:0004537!5.73e-08!60;UBERON:0006965!5.73e-08!60;UBERON:0000080!8.94e-08!18;UBERON:0002120!8.94e-08!18;UBERON:0004875!8.94e-08!18;UBERON:0005721!8.94e-08!18;UBERON:0005754!8.94e-08!18;UBERON:0007297!8.94e-08!18;UBERON:0000058!1.03e-07!26;UBERON:0000055!1.05e-07!69;UBERON:0004872!2.06e-07!84;UBERON:0004876!3.54e-07!20;UBERON:0009773!3.56e-07!12;UBERON:0001231!3.56e-07!12;UBERON:0004810!3.56e-07!12;UBERON:0000353!4.16e-07!17;UBERON:0004573!4.22e-07!33;UBERON:0004571!4.22e-07!33;UBERON:0003103!7.33e-07!69;UBERON:0001225!8.06e-07!13;UBERON:0008987!8.06e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.18e-10;15!UBERON:0004819;6.18e-10;15!UBERON:0001285;6.18e-10;15!UBERON:0007684;6.18e-10;15!UBERON:0006554;2.39e-09;30!UBERON:0001008;2.39e-09;30!UBERON:0004211;9.91e-09;10!UBERON:0009773;9.91e-09;10!UBERON:0001231;9.91e-09;10!UBERON:0004810;9.91e-09;10!UBERON:0000353;6.22e-08;15!UBERON:0001225;7.98e-08;12!UBERON:0008987;7.98e-08;12!UBERON:0002113;9.49e-08;24!UBERON:0011143;9.49e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.08e-16,199;UBERON:0003104,3.36e-16,160;UBERON:0009142,3.36e-16,160;UBERON:0007503,6.22e-16,78;UBERON:0000486,1.01e-15,83;UBERON:0005256,1.00e-13,122;UBERON:0002329,2.79e-13,71;UBERON:0003059,2.79e-13,71;UBERON:0007282,2.79e-13,71;UBERON:0004290,2.79e-13,71;UBERON:0009618,2.79e-13,71;UBERON:0000490,3.11e-13,148;UBERON:0003077,9.83e-13,72;UBERON:0007285,9.83e-13,72;UBERON:0007524,1.24e-12,73;UBERON:0003914,4.92e-12,117;UBERON:0000119,5.57e-12,309;UBERON:0001134,2.14e-11,62;UBERON:0002036,2.14e-11,62;UBERON:0003082,2.14e-11,62;UBERON:0000483,2.31e-11,306;UBERON:0002385,1.22e-10,64;UBERON:0001015,1.22e-10,64;UBERON:0000383,1.22e-10,64;UBERON:0004211,5.99e-10,15;UBERON:0009773,5.99e-10,15;UBERON:0001231,5.99e-10,15;UBERON:0001285,5.99e-10,15;UBERON:0007684,5.99e-10,15;UBERON:0004208,5.99e-10,15;UBERON:0006554,7.36e-10,47;UBERON:0001008,2.71e-09,48;UBERON:0006555,9.06e-09,16;UBERON:0004819,9.06e-09,16;UBERON:0004810,9.89e-09,10;UBERON:0002049,1.82e-08,78;UBERON:0007798,1.82e-08,78;UBERON:0001637,2.12e-08,42;UBERON:0003509,2.12e-08,42;UBERON:0004572,2.12e-08,42;UBERON:0001048,2.15e-08,160;UBERON:0000353,6.51e-08,15;UBERON:0001225,7.82e-08,12;UBERON:0008987,7.82e-08,12;UBERON:0007500,1.57e-07,59;UBERON:0001981,1.57e-07,59;UBERON:0004537,1.57e-07,59;UBERON:0006965,1.57e-07,59;UBERON:0005085,1.57e-07,31;UBERON:0009569,2.53e-07,112;UBERON:0004573,3.80e-07,33;UBERON:0004571,3.80e-07,33;UBERON:0000055,4.75e-07,68;UBERON:0003102,7.77e-07,99;UBERON:0002113,8.02e-07,26;UBERON:0003918,8.02e-07,26;UBERON:0011143,8.02e-07,26;UBERON:0005095,8.02e-07,26;UBERON:0007687,8.02e-07,26;UBERON:0001851,9.22e-07,15 | |||
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| |||
|short_description=p@chr16:3071213..3071278,+ | |||
}} |
Revision as of 01:59, 12 January 2014
Short description: | p@chr16:3071213..3071278, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3071213..3071278, + |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.48e-28 | 250 |
epithelial cell | 1.19e-27 | 253 |
mesodermal cell | 1.28e-15 | 121 |
muscle precursor cell | 1.50e-10 | 58 |
myoblast | 1.50e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.50e-10 | 58 |
electrically responsive cell | 3.90e-10 | 61 |
electrically active cell | 3.90e-10 | 61 |
kidney cell | 4.86e-10 | 17 |
kidney epithelial cell | 4.86e-10 | 17 |
epithelial cell of nephron | 5.99e-10 | 15 |
smooth muscle cell | 1.01e-09 | 43 |
smooth muscle myoblast | 1.01e-09 | 43 |
muscle cell | 1.97e-09 | 55 |
vascular associated smooth muscle cell | 6.19e-09 | 32 |
fibroblast | 7.71e-09 | 76 |
kidney tubule cell | 9.89e-09 | 10 |
nephron tubule epithelial cell | 9.89e-09 | 10 |
mesothelial cell | 5.81e-08 | 19 |
kidney cortical cell | 7.82e-08 | 12 |
renal cortical epithelial cell | 7.82e-08 | 12 |
ectodermal cell | 5.92e-07 | 72 |
endo-epithelial cell | 7.63e-07 | 42 |
squamous epithelial cell | 9.19e-07 | 63 |