FFCP PHASE1:Hg19::chr14:81423432..81423444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1733 | |||
|description=CAGE_peak_at_chr14:81423432..81423444,+ | |||
|id=chr14:81423432..81423444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.32e-27;5!UBERON:0006965;1.27e-17;2 | |||
|ontology_enrichment_disease=DOID:4960!2.46e-12!1;DOID:0070004!2.46e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.26e-23!2;UBERON:0000974!1.76e-18!10;UBERON:0009722!7.91e-17!11;UBERON:0007690!7.91e-17!11;UBERON:0002372!1.96e-12!1;UBERON:0001961!1.96e-12!1;UBERON:0001744!1.96e-12!1;UBERON:0001735!1.96e-12!1;UBERON:0002370!1.97e-12!4;UBERON:0005058!1.97e-12!4;UBERON:0009113!1.97e-12!4;UBERON:0003295!1.97e-12!4;UBERON:0005562!1.97e-12!4;UBERON:0008814!2.08e-12!15;UBERON:0001042!8.64e-11!10;UBERON:0009145!8.64e-11!10;UBERON:0002046!4.98e-10!5;UBERON:0004117!4.98e-10!5;UBERON:0007689!4.98e-10!5;UBERON:0007123!4.98e-10!5;UBERON:0003091!4.98e-10!5;UBERON:0006562!7.40e-10!11;UBERON:0003351!1.39e-08!6;UBERON:0004177!1.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.23e-66;2!UBERON:0005058;1.23e-66;2!UBERON:0009113;1.23e-66;2!UBERON:0004177;1.95e-27;5!UBERON:0005057;1.95e-27;5!UBERON:0002046;3.32e-27;5!UBERON:0000341;6.48e-18;2!UBERON:0002368;2.33e-13;33!UBERON:0000949;2.17e-07;43!UBERON:0000974;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,3.24e-48,11;UBERON:0007690,3.24e-48,11;UBERON:0002370,5.06e-34,4;UBERON:0005058,5.06e-34,4;UBERON:0009113,5.06e-34,4;UBERON:0003295,5.06e-34,4;UBERON:0005562,5.06e-34,4;UBERON:0000974,1.68e-30,10;UBERON:0008814,8.52e-30,18;UBERON:0002046,3.55e-27,5;UBERON:0004117,3.55e-27,5;UBERON:0007689,3.55e-27,5;UBERON:0007123,3.55e-27,5;UBERON:0003091,3.55e-27,5;UBERON:0003351,4.34e-23,6;UBERON:0004177,5.89e-20,7;UBERON:0005057,5.89e-20,7;UBERON:0000341,6.48e-18,2;UBERON:0002368,1.13e-15,35;UBERON:0003408,2.66e-14,10;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0000949,2.51e-12,45;UBERON:0003929,2.28e-10,54;UBERON:0002530,1.55e-09,59;UBERON:0001557,5.35e-08,19;UBERON:0005911,5.36e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,4.04709533488359,6.26512425409259,3.84863228634319,0,3.75518233841173,2.42540626749863,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr14:81423432..81423444,+ | |||
}} |
Revision as of 21:17, 11 January 2014
Short description: | p@chr14:81423432..81423444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:81423432..81423444, + |
Coexpression cluster: | C1733_thymus_thyroid_throat_Hodgkin_CD4_vein_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 3.24e-48 | 11 |
early pharyngeal endoderm | 3.24e-48 | 11 |
thymus | 5.06e-34 | 4 |
hemolymphoid system gland | 5.06e-34 | 4 |
thymic region | 5.06e-34 | 4 |
pharyngeal gland | 5.06e-34 | 4 |
thymus primordium | 5.06e-34 | 4 |
neck | 1.68e-30 | 10 |
pharyngeal arch system | 8.52e-30 | 18 |
thyroid gland | 3.55e-27 | 5 |
pharyngeal pouch | 3.55e-27 | 5 |
thyroid diverticulum | 3.55e-27 | 5 |
pharyngeal pouch 2 | 3.55e-27 | 5 |
thyroid primordium | 3.55e-27 | 5 |
pharyngeal epithelium | 4.34e-23 | 6 |
hemopoietic organ | 5.89e-20 | 7 |
immune organ | 5.89e-20 | 7 |
throat | 6.48e-18 | 2 |
endocrine gland | 1.13e-15 | 35 |
gland of gut | 2.66e-14 | 10 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
endocrine system | 2.51e-12 | 45 |
gut epithelium | 2.28e-10 | 54 |
gland | 1.55e-09 | 59 |
upper respiratory tract | 5.35e-08 | 19 |
endo-epithelium | 5.36e-07 | 82 |