FFCP PHASE1:Hg19::chr14:37051798..37051831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16364 | |||
|TSSclassifier=strong | |||
|UniProt=O15522 | |||
|association_with_transcript=0bp_to_ENST00000258829_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_NKX2-8_5end | |||
|id=chr14:37051798..37051831,- | |||
|ontology_enrichment_celltype=CL:0000066!3.36e-25!254;CL:0002076!3.28e-22!43;CL:0000223!4.37e-15!59;CL:0002368!1.37e-13!13;CL:0000082!1.08e-12!19;CL:0002202!3.91e-09!9;CL:0002632!3.91e-09!9;CL:0000076!8.86e-09!62;CL:0000077!1.41e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.17e-16;13!CL:0002076;1.49e-13;42!CL:0002202;4.85e-12;9!CL:0002632;4.85e-12;9!CL:0000082;1.57e-09;19!CL:0002328;6.45e-08;3!CL:0000307;8.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.34e-20,42;CL:0000066,2.35e-20,253;CL:0002368,1.30e-16,13;CL:0000223,5.72e-13,58;CL:0002202,5.39e-12,9;CL:0002632,5.39e-12,9;CL:0000082,1.51e-09,19;CL:0002328,6.58e-08,3;CL:0000068,8.61e-08,3;CL:0000069,8.61e-08,3;CL:0000307,8.61e-08,3;CL:0000377,8.61e-08,3;CL:0000076,2.91e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.94e-18;29!CL:0000223;6.74e-08;58!CL:0000377;8.44e-08;3 | |||
|ontology_enrichment_disease=DOID:305!4.71e-27!106;DOID:0050687!5.13e-23!143;DOID:162!8.92e-16!235;DOID:1749!1.19e-15!14;DOID:14566!1.94e-15!239;DOID:0050615!1.48e-09!16;DOID:1324!9.28e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.44e-17;14!DOID:0050615;4.95e-07;16!DOID:4362;5.89e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.59e-24,106;DOID:0050687,1.22e-17,143;DOID:1749,1.10e-16,14;DOID:162,4.24e-11,235;DOID:14566,1.35e-10,239;DOID:0050615,5.51e-07,16;DOID:4362,6.75e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.99e-27!72;UBERON:0000065!9.45e-27!53;UBERON:0008947!1.78e-25!38;UBERON:0003258!1.78e-25!38;UBERON:0004119!6.42e-21!169;UBERON:0000925!6.42e-21!169;UBERON:0006595!6.42e-21!169;UBERON:0000072!4.14e-20!46;UBERON:0005153!1.73e-19!37;UBERON:0001007!3.09e-19!155;UBERON:0001555!3.09e-19!155;UBERON:0007026!3.09e-19!155;UBERON:0005178!1.63e-16!34;UBERON:0002224!1.63e-16!34;UBERON:0004921!2.81e-16!129;UBERON:0004185!2.81e-16!129;UBERON:0005181!8.49e-16!35;UBERON:0005157!8.66e-16!51;UBERON:0000077!2.02e-15!130;UBERON:0002048!2.17e-15!22;UBERON:0000117!2.17e-15!22;UBERON:0000171!2.17e-15!22;UBERON:0000170!2.17e-15!22;UBERON:0005597!2.17e-15!22;UBERON:0000118!2.17e-15!22;UBERON:0001041!3.62e-15!98;UBERON:0004802!1.08e-12!19;UBERON:0000115!1.08e-12!19;UBERON:0005911!8.28e-12!82;UBERON:0001737!1.63e-10!9;UBERON:0004807!3.08e-10!28;UBERON:0000915!4.51e-10!52;UBERON:0000063!8.00e-10!97;UBERON:0000064!2.31e-08!219;UBERON:0000464!3.34e-08!104;UBERON:0001557!5.00e-08!19;UBERON:0005177!3.80e-07!107;UBERON:0000481!7.25e-07!347;UBERON:0000062!7.61e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;5.63e-20;44!UBERON:0000072;9.61e-18;37!UBERON:0005178;3.00e-14;34!UBERON:0002224;3.00e-14;34!UBERON:0001737;3.84e-13;9!UBERON:0001557;3.84e-13;9!UBERON:0005181;6.72e-13;35!UBERON:0002048;1.39e-11;22!UBERON:0000117;1.39e-11;22!UBERON:0000171;1.39e-11;22!UBERON:0000170;1.39e-11;22!UBERON:0001004;4.30e-10;65!UBERON:0004802;1.57e-09;19!UBERON:0000115;1.57e-09;19!UBERON:0007196;1.69e-08;15!UBERON:0001558;1.69e-08;15!UBERON:0004807;6.26e-08;22!UBERON:0000485;6.43e-08;7!UBERON:0004815;6.45e-08;3!UBERON:0002031;6.45e-08;3!UBERON:0002298;7.52e-08;6!UBERON:0000915;1.35e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.44e-26,38;UBERON:0003258,4.44e-26,38;UBERON:0000065,8.64e-26,54;UBERON:0001004,3.28e-22,74;UBERON:0000072,1.09e-19,47;UBERON:0004119,2.76e-16,160;UBERON:0000925,2.76e-16,160;UBERON:0006595,2.76e-16,160;UBERON:0005178,3.01e-16,34;UBERON:0002224,3.01e-16,34;UBERON:0001007,9.12e-16,145;UBERON:0001555,9.12e-16,145;UBERON:0007026,9.12e-16,145;UBERON:0001041,9.31e-16,87;UBERON:0005181,1.22e-15,35;UBERON:0004921,4.82e-15,118;UBERON:0005153,2.45e-14,37;UBERON:0001737,1.24e-13,9;UBERON:0002048,1.51e-11,22;UBERON:0000117,1.51e-11,22;UBERON:0000171,1.51e-11,22;UBERON:0000170,1.51e-11,22;UBERON:0005597,1.51e-11,22;UBERON:0000118,1.51e-11,22;UBERON:0000915,1.68e-11,52;UBERON:0005157,2.90e-10,47;UBERON:0004802,1.51e-09,19;UBERON:0000115,1.51e-09,19;UBERON:0001557,6.46e-09,19;UBERON:0007196,1.65e-08,15;UBERON:0001558,1.65e-08,15;UBERON:0011216,2.84e-08,223;UBERON:0001048,5.40e-08,160;UBERON:0004815,6.58e-08,3;UBERON:0002031,6.58e-08,3;UBERON:0002298,7.76e-08,6;UBERON:0005911,1.76e-07,82;UBERON:0005177,2.26e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,4.59710612239464,4.2168828628955,8.8740962440029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97720486891308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,2.01121560067735,1.85443159085912,1.92808823906786,2.75734931830985,2.83243277320128,1.89816495288877,1.07865046528132,0.784885860501384,1.92373578473195,0,0,0,0,0,0,0,0,1.59884970106048,0,0.109750285408626,0,1.00528972411631,0,0.325808305310325,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0,0,1.70161193135412,3.19697332365358,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.80455823272956,8.19520801529477,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,10.2476647523806,14.9908252544783,0.638063562472921,11.6331447983882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36777394539292,7.37332503089366,4.3556393944529,0.188287601553558,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,50.0367217263344,0.597743964753209,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0.185536196323703,0,0,0,0,2.27586896570999,2.03402920234213,3.07303986298317,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,1.30726156222788,5.99522100397994,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16388639742091,0,0,0,0,0,0,0.741412462787447,0,0.702793337176017,0,0.782658475728359,0,0,0,0,0,1.80388103297391,2.69589297632843,1.32930774541437,1.323967823502,1.56966459203613,0,4.55375273647668,0,4.85967267338367,6.76147542159206,1.56706571844725,0,0,0,0,0,2.90967049465258,0,0,0,0,0,5.47543871657448,0,0,1.59847687665704,0.288180834308212,0.80175617316141,0,0,4.34883874479014,1.41416420770077,0,0,1.4279750469085,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,3.80161211469863,0.179287339332845,3.83830394638891,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,1.0342636508924,1.45455861916959,1.71086837884329,1.40963004463334,0.747511887973863,1.10043013569766,4.97086866416635,0,0,0,1.27668251554036,0,0,0,0,1.09937867375164,0,0,0.1251909307065,0,1.10929051536852,1.80079568530012,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,2.35885750512418,20.6185490652517,0.226705925512272,0.231522474323834,15.173675679401,0.358177682162975,1.85280868296583,0.219284049578707,1.23682402162117,1.54331230616732,0.168942440653073,1.53744911152768,0,0.911579868532147,0,0,0,0,0.655219697692825,0.737318726261158,0,0.19998739585493,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,1.42769420259154,0.490738592505128,4.12894031717091,0.733714394086716,3.35024431835981,0,0.690359926060101,0,0,0,0,0,2.62035068016155,0,0.472763092328763,0,0,0.507326481551255,0.546974809018219,1.09651553371436,0,0,5.87707167142138,0,0,1.82089681270989,1.82129753081038,0,0.115233987555779,0,1.97112225632812,0.197318320688547,3.42762138563508,0.111231401892069,0.313972371402056,0,0.280272163313789,0,0,0,0,0,0.929931402945002,0,0,0,0,0,1.29068207646083,0.118332000730565,0,0,1.60374807980835,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,2.10545517115895,0,0.118920090777569,0.11294608203896,0,0.905777061400041,0,0,7.05475944542284,0,4.00650130072764,1.57046773691956,0.891139200981258,0,0,0,0,0,5.8922799739867,1.05868461514708,0.802413666891683,0,0,0.716697915757256,0.157771562193185,0.271965960763659,0,0,0,0,0,0,0,2.02717601618299,0,0.26721740526556,0.0918948995348449,0,11.5941408273906,15.005991288746,0,0.310298987585686,1.49263787330687,0,0,0.0620747142958579,1.23345048838675,1.71847327351045,1.0105859447911,1.30630048738177,0,0.404112318087525,1.64961072403156,0,0.325613074443898,0.426909383510862,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@NKX2-8 | |||
}} |
Revision as of 19:48, 11 January 2014
Short description: | p1@NKX2-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-8_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000258829_5end |
EntrezGene: | NKX2-8 |
HGNC: | 16364 |
UniProt: | O15522 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.34e-20 | 42 |
epithelial cell | 2.35e-20 | 253 |
respiratory epithelial cell | 1.30e-16 | 13 |
endodermal cell | 5.72e-13 | 58 |
epithelial cell of tracheobronchial tree | 5.39e-12 | 9 |
epithelial cell of lower respiratory tract | 5.39e-12 | 9 |
epithelial cell of lung | 1.51e-09 | 19 |
bronchial epithelial cell | 6.58e-08 | 3 |
duct epithelial cell | 8.61e-08 | 3 |
branched duct epithelial cell | 8.61e-08 | 3 |
tracheal epithelial cell | 8.61e-08 | 3 |
tracheoblast | 8.61e-08 | 3 |
squamous epithelial cell | 2.91e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.59e-24 | 106 |
cell type cancer | 1.22e-17 | 143 |
squamous cell carcinoma | 1.10e-16 | 14 |
cancer | 4.24e-11 | 235 |
disease of cellular proliferation | 1.35e-10 | 239 |
respiratory system cancer | 5.51e-07 | 16 |
cervical cancer | 6.75e-07 | 5 |