FFCP PHASE1:Hg19::chr12:51984970..51984984,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6334 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10596 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UQD0 | |||
|association_with_transcript=-35bp_to_ENST00000354534,NM_014191,uc001ryw.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SCN8A_5end | |||
|id=chr12:51984970..51984984,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.27e-12!23;CL:0000057!1.92e-10!75;CL:0000055!3.49e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.89e-13;82!UBERON:0010122;2.44e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.76e-33!94;UBERON:0001016!1.76e-33!94;UBERON:0001017!1.03e-31!82;UBERON:0005743!3.44e-31!86;UBERON:0001049!3.78e-31!57;UBERON:0005068!3.78e-31!57;UBERON:0006241!3.78e-31!57;UBERON:0007135!3.78e-31!57;UBERON:0002780!6.36e-28!41;UBERON:0001890!6.36e-28!41;UBERON:0006240!6.36e-28!41;UBERON:0002616!2.39e-27!59;UBERON:0000955!3.56e-27!69;UBERON:0006238!3.56e-27!69;UBERON:0003080!6.57e-27!42;UBERON:0001869!3.35e-25!32;UBERON:0002020!5.51e-25!34;UBERON:0003528!5.51e-25!34;UBERON:0001893!1.54e-24!34;UBERON:0002791!1.67e-23!33;UBERON:0002619!7.99e-23!22;UBERON:0003075!2.00e-22!86;UBERON:0007284!2.00e-22!86;UBERON:0002346!2.48e-21!90;UBERON:0001950!1.06e-20!20;UBERON:0003056!8.16e-20!61;UBERON:0000956!4.70e-19!25;UBERON:0000203!4.70e-19!25;UBERON:0004121!4.85e-17!169;UBERON:0000033!1.31e-16!123;UBERON:0000924!1.38e-16!173;UBERON:0006601!1.38e-16!173;UBERON:0000153!5.64e-16!129;UBERON:0007811!5.64e-16!129;UBERON:0000475!6.53e-14!365;UBERON:0007023!6.61e-13!115;UBERON:0000200!6.55e-08!6;UBERON:0000483!1.06e-07!309;UBERON:0000468!1.21e-07!659;UBERON:0002420!1.71e-07!9;UBERON:0007245!1.71e-07!9;UBERON:0010009!1.71e-07!9;UBERON:0010011!1.71e-07!9;UBERON:0000454!1.71e-07!9;UBERON:0001871!1.99e-07!7;UBERON:0000119!2.21e-07!312;UBERON:0002308!2.30e-07!9;UBERON:0000125!2.30e-07!9;UBERON:0000349!7.32e-07!5;UBERON:0001872!9.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.84e-71;22!UBERON:0001869;1.45e-69;32!UBERON:0003528;3.42e-68;34!UBERON:0002020;3.42e-68;34!UBERON:0002791;7.01e-65;32!UBERON:0001950;5.06e-64;20!UBERON:0001893;8.32e-63;34!UBERON:0000956;6.58e-62;25!UBERON:0000203;6.58e-62;25!UBERON:0002780;5.45e-49;41!UBERON:0001890;5.45e-49;41!UBERON:0000073;1.71e-43;53!UBERON:0002616;1.71e-43;53!UBERON:0000955;8.23e-35;68!UBERON:0001017;4.08e-31;75!UBERON:0001016;1.01e-23;83!UBERON:0000200;1.11e-21;6!UBERON:0000349;2.68e-18;5!UBERON:0002420;3.29e-18;9!UBERON:0007245;3.29e-18;9!UBERON:0010009;3.29e-18;9!UBERON:0010011;3.29e-18;9!UBERON:0000454;3.29e-18;9!UBERON:0001872;4.15e-18;5!UBERON:0001871;4.24e-18;6!UBERON:0002021;9.08e-18;5!UBERON:0000125;9.32e-18;9!UBERON:0002308;9.32e-18;9!UBERON:0002298;5.86e-14;6!UBERON:0000369;1.10e-13;4!UBERON:0002435;1.10e-13;4!UBERON:0000204;1.10e-13;4!UBERON:0007023;2.33e-13;114!UBERON:0004733;7.84e-13;12!UBERON:0002028;7.84e-13;12!UBERON:0009663;4.70e-12;7!UBERON:0004732;9.09e-12;13!UBERON:0001870;9.23e-12;3!UBERON:0000988;3.55e-11;3!UBERON:0005383;1.87e-10;3!UBERON:0005382;1.87e-10;3!UBERON:0011216;1.45e-09;132!UBERON:0002680;2.38e-09;9!UBERON:0001895;2.38e-09;9!UBERON:0001876;1.90e-08;2!UBERON:0002702;2.01e-08;2!UBERON:0001954;2.53e-08;2!UBERON:0003022;2.53e-08;2!UBERON:0002421;2.53e-08;2!UBERON:0002600;2.53e-08;2!UBERON:0002771;3.02e-08;2!UBERON:0002148;7.76e-08;2!UBERON:0006331;7.76e-08;2!UBERON:0009662;7.76e-08;2!UBERON:0010314;1.78e-07;132!UBERON:0001873;2.44e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.48e-84,56;UBERON:0005068,1.48e-84,56;UBERON:0006241,1.48e-84,56;UBERON:0007135,1.48e-84,56;UBERON:0000073,1.46e-80,53;UBERON:0002616,1.46e-80,53;UBERON:0003528,1.08e-78,34;UBERON:0002020,1.08e-78,34;UBERON:0001869,2.73e-78,32;UBERON:0001893,2.23e-73,34;UBERON:0002791,2.09e-72,32;UBERON:0001017,6.09e-72,81;UBERON:0000955,2.97e-71,68;UBERON:0006238,2.97e-71,68;UBERON:0002619,9.03e-71,22;UBERON:0002780,6.18e-69,41;UBERON:0001890,6.18e-69,41;UBERON:0003080,6.18e-69,41;UBERON:0006240,6.18e-69,41;UBERON:0001950,6.30e-64,20;UBERON:0001016,7.39e-64,89;UBERON:0000956,6.71e-62,25;UBERON:0000203,6.71e-62,25;UBERON:0003075,5.79e-55,82;UBERON:0007284,5.79e-55,82;UBERON:0002346,5.56e-52,86;UBERON:0010371,4.01e-46,104;UBERON:0003056,4.42e-44,61;UBERON:0007023,1.43e-37,114;UBERON:0010314,2.69e-36,132;UBERON:0004121,1.42e-33,171;UBERON:0000924,1.42e-33,171;UBERON:0006601,1.42e-33,171;UBERON:0011216,4.98e-22,223;UBERON:0000200,1.06e-21,6;UBERON:0000025,1.65e-20,192;UBERON:0000349,2.18e-18,5;UBERON:0002420,2.82e-18,9;UBERON:0007245,2.82e-18,9;UBERON:0010009,2.82e-18,9;UBERON:0010011,2.82e-18,9;UBERON:0000454,2.82e-18,9;UBERON:0001871,3.36e-18,6;UBERON:0001872,5.24e-18,5;UBERON:0000125,6.86e-18,9;UBERON:0002308,6.86e-18,9;UBERON:0002021,1.05e-17,5;UBERON:0003076,1.83e-16,15;UBERON:0003057,1.83e-16,15;UBERON:0004111,2.02e-15,240;UBERON:0002298,6.05e-14,6;UBERON:0000369,8.46e-14,4;UBERON:0002435,8.46e-14,4;UBERON:0000204,8.46e-14,4;UBERON:0010082,8.46e-14,4;UBERON:0000483,3.93e-13,306;UBERON:0000119,6.68e-13,309;UBERON:0004733,7.30e-13,12;UBERON:0002028,7.30e-13,12;UBERON:0007277,7.30e-13,12;UBERON:0009663,3.99e-12,7;UBERON:0004732,8.52e-12,13;UBERON:0001870,1.01e-11,3;UBERON:0000988,2.90e-11,3;UBERON:0005383,1.48e-10,3;UBERON:0005382,1.48e-10,3;UBERON:0002680,1.95e-09,9;UBERON:0001895,1.95e-09,9;UBERON:0010092,1.95e-09,9;UBERON:0001876,1.97e-08,2;UBERON:0001954,2.05e-08,2;UBERON:0003022,2.05e-08,2;UBERON:0002421,2.05e-08,2;UBERON:0002600,2.05e-08,2;UBERON:0002702,2.20e-08,2;UBERON:0002771,3.03e-08,2;UBERON:0002148,6.54e-08,2;UBERON:0006331,6.54e-08,2;UBERON:0009662,6.54e-08,2;UBERON:0001873,1.76e-07,2;UBERON:0010122,1.76e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,1.05691048779388,1.29498355494505,0.561803226808994,0,0,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.89694817844431,1.06778694409284,0.423863802319124,1.20036438433761,0.412210116953756,0.772921620136887,0,1.0126579934476,0.584622030967192,1.7670364197088,0.552299391853796,0.161646056818812,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.797814349754612,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0,0,0,1.03473071292505,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,3.37606599385231,0.445234820091624,0.329607748453519,0.422250816255987,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,2.90799823828566,3.8034920246359,3.99227596002388,0,0,0,0,0,0,0,0.583209226766509,0.694499979733169,1.77148277162768,1.32656082487949,0,2.54332297841817,1.47773809476774,5.48463492884931,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,2.81117334870407,0,0,0,0,0,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,4.68499890073502,0,0.240476460754601,0.213452994739353,0,0,0,2.23073497220554,0,0,0,0,0,0,0,4.20294202096853,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0.0984274815147488,0,11.1332156573302,2.99647493445466,0.321506296930038,0.550157746388935,0,0,0,5.1637123159321,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0,0,4.13705460356962,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,6.46739203980405,3.254964198369,0,1.22021956690538,1.17983165588629,0.415045904808692,0,0,0,0,0.468334905806882,1.01444720027578,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0.813741466409323,0,0.107410557042488,0,0.796191777397232,0,0.686791410365586,0,0,0,0.214441591374926,0,0.906823702049089,0,0,0,0,0,0.176689145945881,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0.754773679776773,0,0.982886743728125,0,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0,3.91798273088403,2.8339315265117,2.07524016774297,6.76884001994492,2.26864526599546,4.01112064292464,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,4.9977812617612,7.81078098613847,2.06686796501184,4.81960157473692,2.18789923607288,0,0,0,0,1.07140367175657,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.171488009437418,4.68991157540139,5.85377684709357,0,0.444925607568277,0.078493092850514,2.19961825882403,0,0,0,0,0.0714765441766563,0.790068058663633,0,0,0,0,0,0,0,0.828324005113957,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.596852325484105,0.356760272332706,0.11294608203896,1.97892930141772,0.15096284356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| |||
|short_description=p3@SCN8A | |||
}} |
Revision as of 13:29, 11 January 2014
Short description: | p3@SCN8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCN8A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -35bp_to_ENST00000354534, NM_014191, uc001ryw.2_5end |
EntrezGene: | SCN8A |
HGNC: | 10596 |
UniProt: | Q9UQD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data