FFCP PHASE1:Hg19::chr11:131240565..131240572,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENST00000477098_5end | |||
|coexpression_cluster_id=C271 | |||
|description=CAGE_peak_13_at_NTM_5end | |||
|id=chr11:131240565..131240572,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.43e-07!5;CL:0000457!8.43e-07!5;CL:0002191!8.43e-07!5;CL:0000097!8.43e-07!5;CL:0000831!8.43e-07!5;CL:0002028!8.43e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.15e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.41e-16;82!UBERON:0006241;7.76e-11;3!UBERON:0003057;7.76e-11;3!UBERON:0010122;2.46e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.80e-72!57;UBERON:0005068!5.80e-72!57;UBERON:0006241!5.80e-72!57;UBERON:0007135!5.80e-72!57;UBERON:0001017!7.87e-72!82;UBERON:0005743!3.40e-70!86;UBERON:0000073!2.21e-64!94;UBERON:0001016!2.21e-64!94;UBERON:0007023!2.10e-62!115;UBERON:0000955!1.34e-60!69;UBERON:0006238!1.34e-60!69;UBERON:0002616!1.82e-59!59;UBERON:0002780!2.20e-56!41;UBERON:0001890!2.20e-56!41;UBERON:0006240!2.20e-56!41;UBERON:0003075!6.13e-55!86;UBERON:0007284!6.13e-55!86;UBERON:0003080!8.60e-55!42;UBERON:0002346!8.77e-52!90;UBERON:0001893!4.81e-50!34;UBERON:0002020!6.27e-50!34;UBERON:0003528!6.27e-50!34;UBERON:0002791!2.98e-48!33;UBERON:0001869!1.76e-46!32;UBERON:0003056!1.18e-42!61;UBERON:0002619!2.51e-39!22;UBERON:0000153!1.26e-36!129;UBERON:0007811!1.26e-36!129;UBERON:0000033!3.56e-36!123;UBERON:0001950!1.69e-35!20;UBERON:0000956!5.89e-34!25;UBERON:0000203!5.89e-34!25;UBERON:0004121!4.11e-33!169;UBERON:0000924!6.20e-32!173;UBERON:0006601!6.20e-32!173;UBERON:0003076!1.76e-17!15;UBERON:0003057!1.76e-17!15;UBERON:0002308!1.89e-17!9;UBERON:0000125!1.89e-17!9;UBERON:0002420!4.29e-17!9;UBERON:0007245!4.29e-17!9;UBERON:0010009!4.29e-17!9;UBERON:0010011!4.29e-17!9;UBERON:0000454!4.29e-17!9;UBERON:0000025!8.64e-16!194;UBERON:0009663!4.67e-14!7;UBERON:0004732!7.37e-14!13;UBERON:0000200!1.81e-12!6;UBERON:0004733!2.62e-12!12;UBERON:0002028!2.62e-12!12;UBERON:0007277!2.62e-12!12;UBERON:0001871!5.71e-12!7;UBERON:0002298!6.11e-12!8;UBERON:0004111!8.45e-12!241;UBERON:0001872!4.29e-11!5;UBERON:0002021!6.58e-11!5;UBERON:0000349!3.62e-10!5;UBERON:0000475!6.24e-10!365;UBERON:0000477!2.62e-09!286;UBERON:0000064!5.10e-09!219;UBERON:0000369!1.20e-08!4;UBERON:0002435!1.20e-08!4;UBERON:0000204!1.20e-08!4;UBERON:0010082!1.20e-08!4;UBERON:0000483!1.85e-08!309;UBERON:0000119!3.08e-08!312;UBERON:0001894!7.75e-08!7;UBERON:0006222!7.75e-08!7;UBERON:0002680!1.86e-07!9;UBERON:0001895!1.86e-07!9;UBERON:0010092!1.86e-07!9;UBERON:0000468!2.38e-07!659;UBERON:0002771!2.70e-07!3;UBERON:0000062!2.98e-07!511;UBERON:0002240!3.06e-07!3;UBERON:0001896!3.68e-07!3;UBERON:0005290!3.68e-07!3;UBERON:0010096!3.68e-07!3;UBERON:0005383!5.86e-07!3;UBERON:0005382!5.86e-07!3;UBERON:0000922!8.84e-07!612;UBERON:0006331!9.44e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.14e-54;34!UBERON:0002780;3.28e-54;41!UBERON:0001890;3.28e-54;41!UBERON:0001869;1.61e-53;32!UBERON:0002791;1.69e-53;32!UBERON:0003528;8.20e-51;34!UBERON:0002020;8.20e-51;34!UBERON:0000073;3.33e-48;53!UBERON:0002616;3.33e-48;53!UBERON:0002619;1.98e-47;22!UBERON:0001950;1.71e-41;20!UBERON:0000956;2.31e-41;25!UBERON:0000203;2.31e-41;25!UBERON:0001017;8.47e-35;75!UBERON:0000955;2.41e-34;68!UBERON:0001016;2.90e-28;83!UBERON:0000125;1.07e-21;9!UBERON:0002308;1.07e-21;9!UBERON:0009663;1.80e-21;7!UBERON:0000200;8.59e-19;6!UBERON:0001872;6.96e-17;5!UBERON:0002021;1.12e-16;5!UBERON:0002420;1.77e-16;9!UBERON:0007245;1.77e-16;9!UBERON:0010009;1.77e-16;9!UBERON:0010011;1.77e-16;9!UBERON:0000454;1.77e-16;9!UBERON:0004732;9.35e-15;13!UBERON:0002784;1.73e-14;4!UBERON:0002298;1.34e-13;6!UBERON:0000369;9.93e-13;4!UBERON:0002435;9.93e-13;4!UBERON:0000204;9.93e-13;4!UBERON:0007023;1.25e-12;114!UBERON:0004733;1.70e-12;12!UBERON:0002028;1.70e-12;12!UBERON:0001894;3.81e-12;7!UBERON:0011216;3.98e-12;132!UBERON:0002240;7.76e-11;3!UBERON:0005174;7.76e-11;3!UBERON:0001137;7.76e-11;3!UBERON:0001896;1.38e-10;3!UBERON:0005290;1.38e-10;3!UBERON:0001870;4.85e-10;3!UBERON:0005383;4.85e-10;3!UBERON:0005382;4.85e-10;3!UBERON:0001905;2.10e-08;2!UBERON:0002757;2.10e-08;2!UBERON:0010134;2.10e-08;2!UBERON:0005408;2.10e-08;2!UBERON:0001899;2.10e-08;2!UBERON:0002771;8.86e-08;2!UBERON:0001897;8.86e-08;2!UBERON:0001954;8.86e-08;2!UBERON:0001875;8.86e-08;2!UBERON:0003022;8.86e-08;2!UBERON:0002421;8.86e-08;2!UBERON:0006514;8.86e-08;2!UBERON:0010225;8.86e-08;2!UBERON:0002600;8.86e-08;2!UBERON:0010314;1.81e-07;132!UBERON:0001873;2.46e-07;2!UBERON:0002702;2.46e-07;2!UBERON:0005162;4.65e-07;2!UBERON:0000122;4.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.41e-97,56;UBERON:0005068,5.41e-97,56;UBERON:0006241,5.41e-97,56;UBERON:0007135,5.41e-97,56;UBERON:0001017,2.27e-88,81;UBERON:0000073,5.04e-88,53;UBERON:0002616,5.04e-88,53;UBERON:0001016,5.80e-82,89;UBERON:0002780,1.44e-77,41;UBERON:0001890,1.44e-77,41;UBERON:0003080,1.44e-77,41;UBERON:0006240,1.44e-77,41;UBERON:0000955,1.07e-76,68;UBERON:0006238,1.07e-76,68;UBERON:0001893,1.64e-66,34;UBERON:0003075,2.13e-66,82;UBERON:0007284,2.13e-66,82;UBERON:0002346,7.69e-63,86;UBERON:0003528,8.24e-62,34;UBERON:0002020,8.24e-62,34;UBERON:0001869,6.64e-61,32;UBERON:0002791,7.74e-61,32;UBERON:0003056,6.74e-53,61;UBERON:0010371,3.47e-50,104;UBERON:0002619,1.70e-47,22;UBERON:0007023,2.36e-42,114;UBERON:0001950,1.55e-41,20;UBERON:0000956,2.01e-41,25;UBERON:0000203,2.01e-41,25;UBERON:0010314,2.46e-39,132;UBERON:0004121,1.02e-37,171;UBERON:0000924,1.02e-37,171;UBERON:0006601,1.02e-37,171;UBERON:0011216,2.13e-30,223;UBERON:0000025,2.52e-22,192;UBERON:0000125,7.05e-22,9;UBERON:0002308,7.05e-22,9;UBERON:0009663,1.02e-21,7;UBERON:0003076,8.06e-20,15;UBERON:0003057,8.06e-20,15;UBERON:0000200,3.76e-19,6;UBERON:0001872,6.24e-17,5;UBERON:0002420,1.15e-16,9;UBERON:0007245,1.15e-16,9;UBERON:0010009,1.15e-16,9;UBERON:0010011,1.15e-16,9;UBERON:0000454,1.15e-16,9;UBERON:0002021,1.24e-16,5;UBERON:0004111,9.42e-16,240;UBERON:0002784,1.63e-14,4;UBERON:0004732,1.63e-14,13;UBERON:0002298,1.86e-13,6;UBERON:0000369,5.47e-13,4;UBERON:0002435,5.47e-13,4;UBERON:0000204,5.47e-13,4;UBERON:0010082,5.47e-13,4;UBERON:0004733,2.83e-12,12;UBERON:0002028,2.83e-12,12;UBERON:0007277,2.83e-12,12;UBERON:0001894,3.91e-12,7;UBERON:0006222,3.91e-12,7;UBERON:0000483,1.25e-11,306;UBERON:0000119,2.05e-11,309;UBERON:0002240,9.98e-11,3;UBERON:0005174,9.98e-11,3;UBERON:0001137,9.98e-11,3;UBERON:0001896,1.34e-10,3;UBERON:0005290,1.34e-10,3;UBERON:0010096,1.34e-10,3;UBERON:0005383,2.83e-10,3;UBERON:0005382,2.83e-10,3;UBERON:0001870,3.66e-10,3;UBERON:0001905,2.04e-08,2;UBERON:0002757,2.04e-08,2;UBERON:0010134,2.04e-08,2;UBERON:0005408,2.04e-08,2;UBERON:0001899,2.04e-08,2;UBERON:0002771,7.26e-08,2;UBERON:0001954,8.31e-08,2;UBERON:0003022,8.31e-08,2;UBERON:0002421,8.31e-08,2;UBERON:0002600,8.31e-08,2;UBERON:0001897,8.59e-08,2;UBERON:0010225,8.59e-08,2;UBERON:0001875,1.05e-07,2;UBERON:0006514,1.05e-07,2;UBERON:0001873,2.09e-07,2;UBERON:0010122,2.09e-07,2;UBERON:0002702,2.23e-07,2;UBERON:0005162,3.09e-07,2;UBERON:0000122,3.09e-07,2;UBERON:0000923,4.57e-07,560;UBERON:0010316,4.57e-07,560;UBERON:0005291,4.57e-07,560;UBERON:0006598,4.57e-07,560;UBERON:0010317,4.57e-07,560;UBERON:0002532,4.57e-07,560;UBERON:0002050,6.32e-07,564 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,4.35389042635621,1.00883967391873,3.7872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,1.30139853857622,5.41302168944387,2.17771144934653,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28197250745681,1.81520899825294,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,1.93866549219044,1.11321717794222,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,1.4471572635049,3.05163472634166,1.10579259931225,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95463285643963,0,1.40558667435203,0,0,0,0,0,4.89716418608784,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.32739144116388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,2.58786471611994,0,0,0,0,0.77380195455795,1.09349201984444,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0,0,3.10279095267721,0.79339561045614,0,0,1.28144895081234,0,0,0.496166021811951,0,0,0,0,1.2534494701135,2.45076461410769,0,0,1.77213635993397,3.29470915235301,2.253436752717,4.58727356552057,2.3295100822739,1.42821726765182,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60573062741149,7.08482881627925,2.07524016774297,1.8460472781668,11.0911546337556,1.24483054435592,1.77623210195036,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,1.82351478469666,3.12431239445539,3.72036233702131,2.02930592620502,7.65764732625507,0.548257766857182,0,0,0,10.1783348816874,11.7699302776588,0,0,0,0,0,1.15548546060614,1.77586488619693,0,0,0,1.88538707899202,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,10.0117318228622,3.26751040359795,1.2679671827502,0,0,0,0,0,0,0,0,0,1.72007499781742,0,0.951880862672806,4.79985759374415,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31667775783512,2.27552590896169,0.213233981900981,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p13@NTM | |||
}} |
Revision as of 11:16, 11 January 2014
Short description: | p13@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NTM_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | 41bp_to_ENST00000477098_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.15e-07 | 8 |