FFCP PHASE1:Hg19::chr11:2018455..2018516,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |||
|association_with_transcript=0bp_to_AF118081_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_2_at_AF118081_5end | |||
|id=chr11:2018455..2018516,+ | |||
|ontology_enrichment_celltype=CL:0000188!7.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.16e-14;19!CL:0000188;2.30e-10;9!CL:0000680;1.02e-07;7!CL:0002577;6.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.20e-14,19;CL:0000188,2.89e-10,9;CL:0002577,6.24e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.53e-12!238;UBERON:0009142!5.53e-12!238;UBERON:0001557!1.73e-11!19;UBERON:0005631!2.34e-11!14;UBERON:0000158!2.34e-11!14;UBERON:0000481!3.61e-11!347;UBERON:0001737!1.31e-10!9;UBERON:0000478!1.52e-09!24;UBERON:0003103!6.19e-09!69;UBERON:0003124!9.32e-09!7;UBERON:0000064!3.67e-08!219;UBERON:0004923!3.70e-08!57;UBERON:0004119!1.04e-07!169;UBERON:0000925!1.04e-07!169;UBERON:0006595!1.04e-07!169;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0000077!1.09e-07!130;UBERON:0000063!5.29e-07!97;UBERON:0000926!7.07e-07!448;UBERON:0004120!7.07e-07!448;UBERON:0006603!7.07e-07!448;UBERON:0000072!8.34e-07!46;UBERON:0002100!8.87e-07!216;UBERON:0001007!8.99e-07!155;UBERON:0001555!8.99e-07!155;UBERON:0007026!8.99e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.75e-20;16!UBERON:0002036;2.75e-20;16!UBERON:0001737;5.87e-16;9!UBERON:0001557;5.87e-16;9!UBERON:0000478;1.73e-14;24!UBERON:0005631;3.21e-11;10!UBERON:0000158;3.21e-11;10!UBERON:0001987;1.45e-08;4!UBERON:0002385;2.28e-08;31!UBERON:0001015;2.28e-08;31!UBERON:0000383;2.28e-08;31!UBERON:0011135;4.99e-08;5!UBERON:0002216;4.99e-08;5!UBERON:0011134;4.99e-08;5!UBERON:0002209;4.99e-08;5!UBERON:0002213;4.99e-08;5!UBERON:0007844;4.99e-08;5!UBERON:0011138;4.99e-08;5!UBERON:0001130;4.99e-08;5!UBERON:0001066;4.99e-08;5!UBERON:0001468;4.99e-08;5!UBERON:0000305;5.64e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.22e-18,14;UBERON:0000158,8.22e-18,14;UBERON:0001737,6.03e-16,9;UBERON:0000478,1.75e-14,24;UBERON:0003124,5.28e-13,7;UBERON:0001557,9.72e-12,19;UBERON:0003104,7.01e-09,160;UBERON:0009142,7.01e-09,160;UBERON:0001987,1.44e-08,4;UBERON:0004340,1.44e-08,4;UBERON:0004871,4.67e-08,8;UBERON:0011135,4.74e-08,5;UBERON:0002216,4.74e-08,5;UBERON:0011134,4.74e-08,5;UBERON:0002209,4.74e-08,5;UBERON:0002213,4.74e-08,5;UBERON:0005856,4.74e-08,5;UBERON:0005866,4.74e-08,5;UBERON:0005863,4.74e-08,5;UBERON:0007844,4.74e-08,5;UBERON:0011138,4.74e-08,5;UBERON:0001130,4.74e-08,5;UBERON:0001066,4.74e-08,5;UBERON:0001468,4.74e-08,5;UBERON:0005256,2.16e-07,122;UBERON:0000305,5.52e-07,7;UBERON:0001041,8.86e-07,87 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,3.00219895059391,1.34088328328186,8.72338524100369,0,0,0,1.47440361900905,1.39560233594486,25.1207577949698,21.6288922147332,2.10402800032079,3.97676850873499,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.40648818027883,0,0,0.289693037921647,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0.24666754841716,1.55605517699883,0,0.326923806226917,1.05950199351452,38.0276110156799,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74290914304278,0.725627385107593,1.00928340350251,0,0,0,0,0,0,18.929088006375,16.6898843177321,21.2089706297464,21.3970307100844,20.0449088565014,21.1170851008876,37.752766284846,22.5654684894148,21.5458407889979,0,1.40241773803446,2.4694440679884,7.3504355692771,0,0,5.31710916013264,0,0,0,0,0,0,6.48119116109707,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,1.42977993658148,86.8194568626309,0.823240336780769,0,1.06617584622764,4.75171123760058,0,0,0,0,0,0,0,0,0,5.21212704003285,4.9314317412092,3.22309733831812,0,0,0,0,0,0,0,0,3.18969375826582,0,0,0,3.55805325985506,4.50153468953709,2.71265023699736,0.207970861530807,0.178428988797162,0,0.234282829985426,0.601892199455438,0,8.27784570340039,0,0,0,18.6011099589604,27.1083304810576,0,0,0,58.8067488605743,71.5672389895137,70.1545480524858,0.744323423456331,0,1.68396056659844,1.02511319404561,1.02341449813341,1.12597744800525,8.90508398669946,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0,0,0,0,1.13733384070897,0.170093705276516,0,7.71136263451447,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,1.6068392984416,6.86362099874066,1.23238893691716,3.99109554287937,4.13509717453592,1.07420244868274,2.61030049045611,2.04543905798642,32.2295969041189,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,0.38126038784765,0.255897791311334,6.84702380854273,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.860468113224309,6.58268574787912,0,0,0.422215270595328,0.329294892959902,0.379473173765715,1.04980416073495,0,0.670302275535787,0,2.35359501941948,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,49.8975973101772,26.4298565941048,104.434638713739,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,1.76352923497993,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0,0,5.4752163089961,4.78048436456836,44.9791635222006,1.37396390102793,83.6864598349257,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0.353830258013357,4.888241159469,0,0,0,0,39.3263047176407,0,0,0,0,0.394584402849391,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.581934098930517,0,2.03382666702479,0,0,0.0633107959558787,0.391102765469606,0,0,30.5708702660659,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,1.39775300349294,1.71690419254628,0.446342914883745,2.14987111957524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,2.36045646607491,0,0,0,2.85878130549347,1.98627591109629,0.25426853765475,0,0,0.326587360109409,0,0,0,0,1.02586563574658,56.9779622322552,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0004164699473,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,3.12691953050377,0,2.29340240203229,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.825788063434183,0.366857197043358,19.7548889117078,0,0,0,1.0529445968896,0,0,32.4764301156964,0,0.443568258651136,0,0,0,0,0,0,3.47347824872506,0,0.255524855279191,0,0,0,0,23.5948304632619,0,0,0,0,0,0,0.863424021355654,0,3.64353812307926,28.3079203357944,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,1.27016115057279,1.14553434272025,0,0,0,0,0,2.58971534875158,6.57041963879981,38.2738762341606,1.94284397223656,0,0,0,0,0.109940516745429,0.150962843566674,0,3.27839340755936,0,0.490296643507811,0.707029641304878,0,0,2.9585900930838,0,0.187967835959707,1.93373663920732,0,0.892769693028288,0,0,2.92134555298607,0,0,0,0,0,6.87734892670021,0,1.84870251452567,19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| |||
|short_description=p2@AF118081 | |||
}} |
Revision as of 06:07, 11 January 2014
Short description: | p2@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.20e-14 | 19 |
cell of skeletal muscle | 2.89e-10 | 9 |
placental epithelial cell | 6.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.22e-18 | 14 |
membranous layer | 8.22e-18 | 14 |
larynx | 6.03e-16 | 9 |
extraembryonic structure | 1.75e-14 | 24 |
chorion | 5.28e-13 | 7 |
upper respiratory tract | 9.72e-12 | 19 |
mesenchyme | 7.01e-09 | 160 |
entire embryonic mesenchyme | 7.01e-09 | 160 |
placenta | 1.44e-08 | 4 |
allantois | 1.44e-08 | 4 |
somatic layer of lateral plate mesoderm | 4.67e-08 | 8 |
intervertebral cartilage | 4.74e-08 | 5 |
symphysis | 4.74e-08 | 5 |
nonsynovial joint | 4.74e-08 | 5 |
fibrous joint | 4.74e-08 | 5 |
cartilaginous joint | 4.74e-08 | 5 |
developing mesenchymal condensation | 4.74e-08 | 5 |
pre-cartilage condensation | 4.74e-08 | 5 |
cartilaginous condensation | 4.74e-08 | 5 |
cartilage element | 4.74e-08 | 5 |
post-cranial axial skeletal system | 4.74e-08 | 5 |
vertebral column | 4.74e-08 | 5 |
intervertebral disk | 4.74e-08 | 5 |
intervertebral joint | 4.74e-08 | 5 |
trunk mesenchyme | 2.16e-07 | 122 |
amnion | 5.52e-07 | 7 |
foregut | 8.86e-07 | 87 |