FFCP PHASE1:Hg19::chr11:2016429..2016471,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=272bp_to_BC106079_5end | |||
|description=CAGE_peak_2_at_BC106079_5end | |||
|id=chr11:2016429..2016471,- | |||
|ontology_enrichment_celltype=CL:0000188!5.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.92e-16;19!CL:0002577;2.75e-08;3!CL:0002541;8.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.05e-16,19;CL:0002577,2.76e-08,3;CL:0002541,9.49e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.68e-13!14;UBERON:0000158!6.68e-13!14;UBERON:0001557!2.68e-11!19;UBERON:0001737!2.07e-10!9;UBERON:0004923!7.51e-10!57;UBERON:0003124!1.09e-09!7;UBERON:0000478!1.45e-08!24;UBERON:0004119!2.79e-08!169;UBERON:0000925!2.79e-08!169;UBERON:0006595!2.79e-08!169;UBERON:0004921!3.87e-08!129;UBERON:0004185!3.87e-08!129;UBERON:0000077!1.20e-07!130;UBERON:0003104!1.48e-07!238;UBERON:0009142!1.48e-07!238;UBERON:0001007!1.95e-07!155;UBERON:0001555!1.95e-07!155;UBERON:0007026!1.95e-07!155;UBERON:0001041!7.02e-07!98;UBERON:0000064!9.10e-07!219;UBERON:0000481!9.33e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.79e-17;9!UBERON:0001557;1.79e-17;9!UBERON:0000478;3.65e-17;24!UBERON:0005631;7.54e-15;10!UBERON:0000158;7.54e-15;10!UBERON:0001987;1.98e-10;4!UBERON:0000305;4.62e-09;7!UBERON:0001723;4.41e-08;3!UBERON:0001033;4.41e-08;3!UBERON:0001134;5.83e-08;16!UBERON:0002036;5.83e-08;16!UBERON:0003124;8.84e-08;3!UBERON:0000920;8.84e-08;3!UBERON:0000922;1.69e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.91e-23,14;UBERON:0000158,2.91e-23,14;UBERON:0001737,8.16e-18,9;UBERON:0000478,3.83e-17,24;UBERON:0001557,1.56e-16,19;UBERON:0003124,1.74e-16,7;UBERON:0001987,1.99e-10,4;UBERON:0004340,1.99e-10,4;UBERON:0004923,9.58e-10,66;UBERON:0000305,4.71e-09,7;UBERON:0004119,5.32e-09,160;UBERON:0000925,5.32e-09,160;UBERON:0006595,5.32e-09,160;UBERON:0001041,6.08e-09,87;UBERON:0004921,1.46e-08,118;UBERON:0001723,4.64e-08,3;UBERON:0001033,4.64e-08,3;UBERON:0010056,4.64e-08,3;UBERON:0004871,7.52e-08,8;UBERON:0000920,9.49e-08,3;UBERON:0001007,1.27e-07,145;UBERON:0001555,1.27e-07,145;UBERON:0007026,1.27e-07,145;UBERON:0000072,7.53e-07,47 | |||
|phase1_expression=2.72517568905835,0.214100523890983,0.986680828671798,1.0007329835313,0,6.10636966870258,0,0,0.261185628199839,1.22866968250754,0,73.3963010357379,4.22027165165526,0.618831764800233,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0.933633106199299,0,0.163461903113459,7.11379909931178,0.576175924479999,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,1.77460200059766,1.85443159085912,2.41011029883482,2.20587945464788,2.17879444092406,2.84724742933316,2.83145747136345,2.15843611637881,1.53898862778556,0.738155454624648,0,3.2925920906512,1.47008711385542,0,0,1.77236972004421,0,0,0,0.109750285408626,0,0,3.14800713539001,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,2.14466990487221,98.7571321812426,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60606352001643,0.821905290201534,6.98337756635593,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,1.96306386750624,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,165.647779213479,4.80400793335198,0,0,0,15.156378572313,26.6296703216795,5.14063498660456,1.24053903909388,0.460385919864187,0.280660094433074,4.10045277618243,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,3.57681657680851,0.616194468458578,0.921022048356777,0.827019434907183,0.644521469209642,0.580066775656914,0.340906509664404,11.2180364914889,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,1.58189712359363,0,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.286822704408103,0.294747123039363,0,0,0,0,1.89736586882858,0,0.0962221127255121,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,28.4105936837851,13.0664459566361,88.4622822045788,0,0,0,0,0.211125408127993,0.597743964753209,0,2.01546198283421,0,0,0,0,0,0,2.07151151837561,0,0,0.969332746095218,0,0,0,0,0,0.227586896570999,0,0.472775363535873,1.37897349296586,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,1.43612231055635,6.08425282763245,10.8460394308853,1.37396390102793,36.2463647692672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,4.888241159469,0,0,0,0.067401132980677,23.2747517716649,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0.164230914106418,0.387956065953678,0,4.06765333404958,0,0,0.0633107959558787,3.32437350649165,0,0,16.9838168144811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0.199679000498991,0.858452096273142,0.223171457441873,3.62790751428322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,2.36045646607491,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.439656701034247,17.2258955585888,0,0,0,0,0,1.57204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0004164699473,1.37358282073117,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,6.79296311799095,0,0.54604819096007,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.943757786781923,0,8.54889929512503,0,0,0,0.300841313397029,0,0,13.0953347240711,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,7.18489198317375,0,1.54339208493677,0,0,0,0,0.235479278551542,0,7.5673484094723,9.13158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,1.94228651156368,1.33461648913121,20.8766597640876,14.085618798715,0,0,0,0,0,0,0,0.655678681511872,0,0.245148321753905,0.235676547101626,0,0.297046400327086,2.113278637917,0,0.0939839179798536,2.32048396704878,0,1.2498775702396,0,0,0.730336388246517,0,0,1.41994405973866,0,0.436350690340377,5.81929524566941,0.371995018166751,0,4.75889218336168,0,0.655593431782173,0,0,0,0.0918948995348449,0,0.303114792872958,0,0,0,3.41174371041569,6.66580408098473,0.0645889098360061,0.496597714366863,0,0.445530107947154,4.85081253499726,4.13661821004227,15.0582652477524,1.0776328482334,0.645499848534087,10.3124710529264,0.244209805832924,0,0,0,11.7320471201727,0.611207220914332,3.66206560484165,0,0,0 | |||
|short_description=p2@BC106079 | |||
}} |
Revision as of 06:06, 11 January 2014
Short description: | p2@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC106079_5end |
Coexpression cluster: | NA |
Association with transcript: | 272bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.05e-16 | 19 |
placental epithelial cell | 2.76e-08 | 3 |
chorionic membrane mesenchymal stem cell | 9.49e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.91e-23 | 14 |
membranous layer | 2.91e-23 | 14 |
larynx | 8.16e-18 | 9 |
extraembryonic structure | 3.83e-17 | 24 |
upper respiratory tract | 1.56e-16 | 19 |
chorion | 1.74e-16 | 7 |
placenta | 1.99e-10 | 4 |
allantois | 1.99e-10 | 4 |
organ component layer | 9.58e-10 | 66 |
amnion | 4.71e-09 | 7 |
endoderm-derived structure | 5.32e-09 | 160 |
endoderm | 5.32e-09 | 160 |
presumptive endoderm | 5.32e-09 | 160 |
foregut | 6.08e-09 | 87 |
subdivision of digestive tract | 1.46e-08 | 118 |
tongue | 4.64e-08 | 3 |
gustatory system | 4.64e-08 | 3 |
future tongue | 4.64e-08 | 3 |
somatic layer of lateral plate mesoderm | 7.52e-08 | 8 |
egg chorion | 9.49e-08 | 3 |
digestive system | 1.27e-07 | 145 |
digestive tract | 1.27e-07 | 145 |
primitive gut | 1.27e-07 | 145 |
segment of respiratory tract | 7.53e-07 | 47 |