FFCP PHASE1:Hg19::chr1:165325006..165325012,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4009 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6653 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TE12 | |||
|association_with_transcript=4bp_to_uc001gcy.1_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_LMX1A_5end | |||
|id=chr1:165325006..165325012,- | |||
|ontology_enrichment_celltype=CL:0002322!5.14e-33!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.15e-15;2!CL:0000214;8.99e-11;3!CL:0002322;6.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.15e-15,2;CL:0000214,9.90e-11,3;CL:0002322,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001896!6.22e-21!3;UBERON:0005290!6.22e-21!3;UBERON:0010096!6.22e-21!3;UBERON:0002616!2.28e-09!59;UBERON:0004733!3.35e-09!12;UBERON:0002028!3.35e-09!12;UBERON:0007277!3.35e-09!12;UBERON:0004732!1.68e-08!13;UBERON:0002298!3.57e-08!8;UBERON:0002336!5.05e-08!1;UBERON:0001018!5.05e-08!1;UBERON:0002473!5.05e-08!1;UBERON:0005340!5.05e-08!1;UBERON:0002316!5.05e-08!1;UBERON:0003544!5.05e-08!1;UBERON:0001020!5.05e-08!1;UBERON:0005970!5.05e-08!1;UBERON:0002437!5.05e-08!1;UBERON:0001049!6.85e-08!57;UBERON:0005068!6.85e-08!57;UBERON:0006241!6.85e-08!57;UBERON:0007135!6.85e-08!57;UBERON:0000955!1.16e-07!69;UBERON:0006238!1.16e-07!69;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0001017!1.46e-07!82;UBERON:0003076!2.22e-07!15;UBERON:0003057!2.22e-07!15;UBERON:0007023!2.84e-07!115;UBERON:0005743!3.93e-07!86;UBERON:0002346!6.73e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.15e-15;2!UBERON:0004801;1.15e-15;2!UBERON:0006915;8.99e-11;3!UBERON:0007616;8.99e-11;3!UBERON:0002217;8.99e-11;3!UBERON:0002018;8.99e-11;3!UBERON:0002114;8.99e-11;2!UBERON:0000922;3.66e-09;49!UBERON:0002346;2.11e-08;4!UBERON:0000923;2.11e-08;4!UBERON:0010316;2.11e-08;4!UBERON:0005291;2.11e-08;4!UBERON:0002108;5.70e-07;4!UBERON:0002050;5.70e-07;5!UBERON:0005423;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.15e-15,2;UBERON:0004801,1.15e-15,2;UBERON:0002114,8.99e-11,2;UBERON:0006915,9.90e-11,3;UBERON:0007616,9.90e-11,3;UBERON:0002217,9.90e-11,3;UBERON:0002018,9.90e-11,3;UBERON:0002108,5.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,1.14027160516907,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8563011319852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,8.92293988882216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.998361463831671,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,2.72658681369805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.540219106755613,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0510303085114,0.0679914901909147,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LMX1A | |||
}} |
Revision as of 22:02, 10 January 2014
Short description: | p2@LMX1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LMX1A_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 4bp_to_uc001gcy.1_5end |
EntrezGene: | LMX1A |
HGNC: | 6653 |
UniProt: | Q8TE12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.15e-15 | 2 |
synovial cell | 9.90e-11 | 3 |
embryonic stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.15e-15 | 2 |
cervix epithelium | 1.15e-15 | 2 |
duodenum | 8.99e-11 | 2 |
stratified squamous epithelium | 9.90e-11 | 3 |
layer of synovial tissue | 9.90e-11 | 3 |
synovial joint | 9.90e-11 | 3 |
synovial membrane of synovial joint | 9.90e-11 | 3 |
small intestine | 5.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.79e-07 | 5 |