FFCP PHASE1:Hg19::chr1:156631192..156631208,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000448869_5end | |||
|coexpression_cluster_id=C3881 | |||
|description=CAGE_peak_2_at_ENST00000448869_5end | |||
|id=chr1:156631192..156631208,- | |||
|ontology_enrichment_celltype=CL:0000066!1.95e-26!254;CL:0002139!2.64e-14!24;CL:0000115!1.12e-11!35;CL:0000213!2.95e-11!57;CL:0000215!2.95e-11!57;CL:0000071!5.50e-11!18;CL:0002546!5.50e-11!18;CL:0000076!5.96e-11!62;CL:0002078!2.40e-09!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.97e-19;24!CL:0000071;1.81e-14;18!CL:0000115;2.44e-13;36!CL:0000213;8.12e-10;58!CL:0000215;8.12e-10;58!CL:0000076;4.55e-09;63!CL:0002078;1.46e-08;45!CL:1000413;5.66e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-33,253;CL:0002139,2.28e-19,24;CL:0000213,6.99e-17,58;CL:0000215,6.99e-17,58;CL:0000115,4.61e-16,36;CL:0000076,8.88e-16,63;CL:0000071,9.95e-15,18;CL:0002546,9.95e-15,18;CL:0002078,2.16e-12,45;CL:1000413,4.27e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.81e-14;18!UBERON:0008947;1.40e-09;29!UBERON:0001041;5.37e-09;30 | |||
|ontology_enrichment_disease=DOID:162!1.13e-31!235;DOID:14566!1.87e-31!239;DOID:305!4.32e-30!106;DOID:0050687!9.98e-25!143;DOID:0050686!1.26e-12!137;DOID:0050615!1.33e-07!16;DOID:1324!6.17e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:305;2.84e-10;106!DOID:0050615;6.21e-10;16!DOID:1324;5.27e-09;15!DOID:1749;1.54e-07;14!DOID:0050687;3.20e-07;143!DOID:299;4.73e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.11e-42,239;DOID:162,2.39e-41,235;DOID:305,9.08e-39,106;DOID:0050687,1.15e-31,143;DOID:0050686,8.88e-17,137;DOID:0050615,5.34e-10,16;DOID:1324,4.52e-09,15;DOID:1749,1.41e-07,14;DOID:299,2.99e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000487!4.94e-11!22;UBERON:0001986!5.50e-11!18;UBERON:0004638!5.50e-11!18;UBERON:0004852!5.50e-11!18;UBERON:0000477!5.71e-11!286;UBERON:0004921!1.77e-09!129;UBERON:0004185!1.77e-09!129;UBERON:0004111!3.00e-09!241;UBERON:0006914!6.45e-09!25;UBERON:0001007!9.63e-09!155;UBERON:0001555!9.63e-09!155;UBERON:0007026!9.63e-09!155;UBERON:0000077!5.34e-08!130;UBERON:0004119!5.52e-08!169;UBERON:0000925!5.52e-08!169;UBERON:0006595!5.52e-08!169;UBERON:0000025!1.16e-07!194;UBERON:0001041!1.39e-07!98;UBERON:0005177!5.78e-07!107;UBERON:0001048!8.23e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.81e-14;18!UBERON:0001986;1.81e-14;18!UBERON:0004852;1.81e-14;18!UBERON:0000487;6.22e-14;22!UBERON:0006914;2.26e-11;25!UBERON:0000490;8.12e-09;33!UBERON:0003915;5.66e-08;9!UBERON:0004700;5.66e-08;9!UBERON:0001917;5.66e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.95e-15,18;UBERON:0001986,9.95e-15,18;UBERON:0004852,9.95e-15,18;UBERON:0000487,3.71e-14,22;UBERON:0006914,1.46e-11,25;UBERON:0003915,4.27e-08,9;UBERON:0004700,4.27e-08,9;UBERON:0001917,4.27e-08,9;UBERON:0004921,4.47e-08,118;UBERON:0001041,6.37e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.626909442956176,0,0.821246550437305,0.627713197974014,1.83392173795083,1.31360943119913,1.25937250101887,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0.679856056185397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,4.15953195521899,1.55210578223795,2.45937399940753,0.654895377488563,0,0.370784442784429,0.324547393654683,0,0,0,0,0,7.55297147993479,1.72046919021225,12.4970580578734,5.6530794192401,5.45349267072878,7.70330517432189,8.77778859454604,8.52775305258785,7.1153252537342,8.70273593188143,14.5018554159293,6.84244895146661,14.399661395342,9.19157700864672,4.0507097394088,3.57198913136319,2.2452937262617,1.91439516821648,15.3316637465883,18.9853131913626,5.31285057398181,0,0,0,0,0.12663051166458,1.05927344650575,0,0,0.560677600142307,1.06748995729705,1.48000529050296,0,0.134710672069688,0,0.454072282934794,0,1.87457145467037,0,1.1409436430889,0,0,0,0,0.61246251376468,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0,2.01121560067735,3.37169380156203,1.68707720918437,2.31617342738027,3.26819166138609,2.37270619111097,2.96628877952362,1.37355025587742,1.53898862778556,2.21446636387394,1.40241773803446,0,1.47008711385542,0,0,0,0,2.45976877086227,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,1.95484983186195,0,1.44331342025273,1.39116485970092,0.352226082707465,10.5387506865584,5.55582615091933,4.94660795809955,1.58040879591855,0,0,0.234004265139238,0.594524649154913,0,0,0.141775097242386,0.358234090811393,1.16253575405585,1.15014803749563,0.985326475791887,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.784917590417525,0.43596006883328,0.51336800074665,0.387815147273333,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13838403181876,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,1.0877350463246,1.40354529212299,0.368323955743585,0.229628896329213,0,0,0,0.770153371044148,0.784349769176855,1.46139224653261,1.37217117560738,2.27466768141793,3.40187410553031,0.863663664408557,1.54227252690289,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0,0,0,2.92840555197873,0.103041011647722,2.1060976908219,1.89771849817352,0,0,0,0.870036464629098,0,0,0.827019434907183,0,0,0.511359764496605,1.06838442776085,0,0.384380134730212,1.40373983744043,0.2023155617111,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0.30982349809975,1.12678241012897,0,0,0.7133421029625,0.354761064070598,0,0,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,8.65274976132532,0,0,0.185803175125719,0,0,0.318852545457645,0.59873811429845,0,2.54008299268659,0,1.40398589056729,0,1.56679895773023,2.50634477090067,4.40158622284169,0,0,0,4.80907482658071,2.15068535015921,1.11838053946208,1.00109485027145,5.47086667125713,22.8293062594099,0,5.40911356951966,0.66614393599564,0,4.49137296979728,1.17206543417515,0.121360521749513,3.12041475976939,17.900577248804,0,0,0,0.994147647766298,1.40669416410513,0.890469640183247,12.0306828185534,0,0.19924798825107,0.276283915531148,0,8.89737537768747,0.738508832766417,0,11.5930172980052,15.9328845461292,1.02314474045374,0.394573622547734,0,0,2.90799823828566,1.29875337426592,1.99613798001194,0,1.39935999993913,0,5.68967241427498,4.06805840468426,1.41832609060762,2.06846023944879,0.874813840149763,0,1.77148277162768,0.361789315876224,0,0.552896299656123,0,0.219385397153973,7.7346309098483,2.64905114129346,0.307801034015188,0.227884111694002,2.3056390438806,0.448788222048861,0,0.31900115973192,0.366390373607449,0.533034776018635,2.04386596391473,0.941881538370149,0,32.9369664501084,35.6833812458286,46.4865795923084,5.88236571444974,0.953619473882272,2.3209787098083,1.95879369790977,0.141353071433941,0,2.98578579323551,1.59223616106011,1.22206028986725,0,0,0,1.07841812769083,0,0.468528891450678,0,16.4358279902955,13.5957012539092,0.789168805698781,1.20990716048664,0.30607276163049,0.189559738885464,21.7968958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| |||
|short_description=p2@ENST00000448869 | |||
}} |
Revision as of 21:28, 10 January 2014
Short description: | p2@ENST00000448869 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000448869_5end |
Coexpression cluster: | C3881_squamous_glioblastoma_chronic_somatostatinoma_smallcell_large_lung |
Association with transcript: | 7bp_to_ENST00000448869_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-33 | 253 |
endothelial cell of vascular tree | 2.28e-19 | 24 |
lining cell | 6.99e-17 | 58 |
barrier cell | 6.99e-17 | 58 |
endothelial cell | 4.61e-16 | 36 |
squamous epithelial cell | 8.88e-16 | 63 |
blood vessel endothelial cell | 9.95e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.95e-15 | 18 |
meso-epithelial cell | 2.16e-12 | 45 |
endothelial cell of artery | 4.27e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 9.95e-15 | 18 |
endothelium | 9.95e-15 | 18 |
cardiovascular system endothelium | 9.95e-15 | 18 |
simple squamous epithelium | 3.71e-14 | 22 |
squamous epithelium | 1.46e-11 | 25 |
endothelial tube | 4.27e-08 | 9 |
arterial system endothelium | 4.27e-08 | 9 |
endothelium of artery | 4.27e-08 | 9 |
subdivision of digestive tract | 4.47e-08 | 118 |
foregut | 6.37e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.11e-42 | 239 |
cancer | 2.39e-41 | 235 |
carcinoma | 9.08e-39 | 106 |
cell type cancer | 1.15e-31 | 143 |
organ system cancer | 8.88e-17 | 137 |
respiratory system cancer | 5.34e-10 | 16 |
lung cancer | 4.52e-09 | 15 |
squamous cell carcinoma | 1.41e-07 | 14 |
adenocarcinoma | 2.99e-07 | 25 |