FFCP PHASE1:Hg19::chr1:155100387..155100398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3221 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000469878_5end | |||
|coexpression_cluster_id=C3876 | |||
|description=CAGE_peak_3_at_EFNA1_5end | |||
|id=chr1:155100387..155100398,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-49!254;CL:0000223!1.03e-18!59;CL:0002139!7.09e-15!24;CL:0000076!5.06e-14!62;CL:0000115!5.97e-14!35;CL:0002078!5.52e-13!44;CL:0002076!1.50e-12!43;CL:0000213!6.41e-12!57;CL:0000215!6.41e-12!57;CL:0000071!5.64e-11!18;CL:0002546!5.64e-11!18;CL:0002321!1.65e-07!248;CL:0000220!1.66e-07!246;CL:0000181!5.01e-07!12;CL:0000417!5.01e-07!12;CL:0000668!5.01e-07!12;CL:0000414!5.01e-07!12;CL:0000412!5.01e-07!12;CL:0000182!5.01e-07!12;CL:0002251!8.81e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.24e-20;24!CL:0000115;3.78e-16;36!CL:0000071;1.39e-14;18!CL:0002076;9.60e-12;42!CL:0002078;1.23e-11;45!CL:0002251;1.97e-09;20!CL:0000213;1.68e-08;58!CL:0000215;1.68e-08;58!CL:1000413;1.30e-07;9!CL:1000449;2.64e-07;15!CL:0000076;2.70e-07;63!CL:0000182;3.29e-07;12!CL:0002138;6.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.33e-49,253;CL:0000223,1.31e-21,58;CL:0002139,6.47e-20,24;CL:0000115,5.19e-19,36;CL:0002078,2.86e-17,45;CL:0002076,9.75e-16,42;CL:0000071,1.56e-14,18;CL:0002546,1.56e-14,18;CL:0000213,2.54e-13,58;CL:0000215,2.54e-13,58;CL:0000076,1.25e-12,63;CL:0002251,1.82e-09,20;CL:0002321,1.36e-07,250;CL:1000413,1.66e-07,9;CL:0000182,2.43e-07,12;CL:1000449,3.65e-07,15;CL:0005020,5.51e-07,6;CL:0002138,5.51e-07,6;CL:0005022,5.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-14;18!CL:0000223;3.11e-12;58!UBERON:0008947;5.58e-09;29!CL:0005022;6.01e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.59e-22!106;DOID:0050687!1.60e-17!143;DOID:299!2.18e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.87e-08;25!DOID:305;4.05e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.64e-19,106;DOID:0050687,2.13e-13,143;DOID:299,1.21e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.39e-22!169;UBERON:0000925!3.39e-22!169;UBERON:0006595!3.39e-22!169;UBERON:0001007!3.08e-18!155;UBERON:0001555!3.08e-18!155;UBERON:0007026!3.08e-18!155;UBERON:0004921!6.91e-18!129;UBERON:0004185!6.91e-18!129;UBERON:0001041!1.71e-16!98;UBERON:0000477!3.61e-16!286;UBERON:0000077!1.31e-15!130;UBERON:0004111!7.74e-15!241;UBERON:0005177!4.67e-14!107;UBERON:0005911!1.03e-12!82;UBERON:0001004!1.04e-11!72;UBERON:0000064!1.05e-11!219;UBERON:0000467!1.18e-11!625;UBERON:0000062!1.46e-11!511;UBERON:0000468!1.49e-11!659;UBERON:0000480!1.80e-11!626;UBERON:0000466!5.49e-11!126;UBERON:0001986!5.64e-11!18;UBERON:0004638!5.64e-11!18;UBERON:0004852!5.64e-11!18;UBERON:0000483!1.48e-10!309;UBERON:0000119!3.16e-10!312;UBERON:0000065!4.45e-10!53;UBERON:0000922!4.96e-10!612;UBERON:0000481!5.14e-10!347;UBERON:0000025!5.58e-10!194;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0005172!1.86e-09!55;UBERON:0005173!1.86e-09!55;UBERON:0008947!2.22e-09!38;UBERON:0003258!2.22e-09!38;UBERON:0000923!2.81e-09!604;UBERON:0005291!2.81e-09!604;UBERON:0006598!2.81e-09!604;UBERON:0002532!2.81e-09!604;UBERON:0002365!3.84e-09!31;UBERON:0002330!3.84e-09!31;UBERON:0001048!5.37e-09!168;UBERON:0009569!6.48e-09!113;UBERON:0000487!1.14e-08!22;UBERON:0002530!3.42e-08!59;UBERON:0003929!7.06e-08!54;UBERON:0006914!1.77e-07!25;UBERON:0000072!2.28e-07!46;UBERON:0009497!2.90e-07!25;UBERON:0000015!2.90e-07!25;UBERON:0002423!2.90e-07!25;UBERON:0006235!2.90e-07!25;UBERON:0004161!2.90e-07!25;UBERON:0000058!3.67e-07!26;UBERON:0002417!5.74e-07!61;UBERON:0000916!5.74e-07!61;UBERON:0000464!6.81e-07!104;UBERON:0007023!7.30e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-14;18!UBERON:0001986;1.39e-14;18!UBERON:0004852;1.39e-14;18!UBERON:0000487;2.59e-12;22!UBERON:0006914;5.05e-11;25!UBERON:0000490;1.66e-10;33!UBERON:0002365;8.42e-10;31!UBERON:0002330;8.42e-10;31!UBERON:0000065;6.62e-09;44!UBERON:0002423;1.61e-08;25!UBERON:0001737;2.66e-08;9!UBERON:0001557;2.66e-08;9!UBERON:0003915;1.30e-07;9!UBERON:0004700;1.30e-07;9!UBERON:0001917;1.30e-07;9!UBERON:0000353;1.51e-07;15!UBERON:0006555;2.64e-07;15!UBERON:0004819;2.64e-07;15!UBERON:0001285;2.64e-07;15!UBERON:0007684;2.64e-07;15!UBERON:0000072;8.29e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-21,160;UBERON:0000925,1.14e-21,160;UBERON:0006595,1.14e-21,160;UBERON:0001007,8.20e-17,145;UBERON:0001555,8.20e-17,145;UBERON:0007026,8.20e-17,145;UBERON:0004921,7.84e-16,118;UBERON:0001041,1.09e-15,87;UBERON:0004638,1.56e-14,18;UBERON:0001986,1.56e-14,18;UBERON:0004852,1.56e-14,18;UBERON:0005177,1.12e-12,101;UBERON:0005911,1.36e-12,82;UBERON:0000487,2.60e-12,22;UBERON:0009569,2.47e-11,112;UBERON:0006914,4.15e-11,25;UBERON:0008947,1.91e-10,38;UBERON:0003258,1.91e-10,38;UBERON:0002365,3.37e-10,31;UBERON:0002330,3.37e-10,31;UBERON:0001004,3.55e-10,74;UBERON:0005172,4.35e-10,54;UBERON:0005173,4.35e-10,54;UBERON:0000065,3.33e-09,54;UBERON:0004111,4.60e-09,240;UBERON:0001737,1.40e-08,9;UBERON:0003914,1.43e-08,117;UBERON:0009497,1.88e-08,25;UBERON:0000015,1.88e-08,25;UBERON:0002423,1.88e-08,25;UBERON:0006235,1.88e-08,25;UBERON:0004161,1.88e-08,25;UBERON:0002417,4.70e-08,60;UBERON:0000916,4.70e-08,60;UBERON:0006555,1.04e-07,16;UBERON:0004819,1.04e-07,16;UBERON:0003929,1.06e-07,54;UBERON:0000058,1.24e-07,19;UBERON:0003915,1.66e-07,9;UBERON:0004700,1.66e-07,9;UBERON:0001917,1.66e-07,9;UBERON:0000353,1.83e-07,15;UBERON:0004211,3.65e-07,15;UBERON:0009773,3.65e-07,15;UBERON:0001231,3.65e-07,15;UBERON:0001285,3.65e-07,15;UBERON:0007684,3.65e-07,15;UBERON:0004208,3.65e-07,15;UBERON:0008835,5.23e-07,22;UBERON:0003894,5.23e-07,22;UBERON:0002530,8.84e-07,59;UBERON:0006554,9.05e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.09220686065086,1.05506791291381,2.10402800032079,1.32558950291166,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,3.67768489791571,1.50602959389125,1.84877005083394,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,2.22664428346111,1.45718115317017,2.59549109949101,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,3.37896092523399,2.58070378531837,3.47140501607594,1.13061588384802,7.55098985177831,4.67700671298115,2.29894463190492,4.90991842421725,4.26919515224052,10.0416183829401,6.8480983908555,5.32190474002959,18.0605922585645,3.30896772311282,9.72170337458112,3.83988831621543,2.02076435363553,2.59006405111641,7.66583187329416,4.74632829784064,3.84723662253855,0,0,3.92484646928281,0,0,0,0,0.354668382198357,0.560677600142307,3.20246987189115,0.98667019366864,0.311211035399766,0.942974704487816,0.490385709340376,0.151357427644931,0,0,0,1.71141546463335,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,7.92369497969517,5.18217629122586,2.86804595389004,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,6.7434876022711,4.88895601226495,3.61516544825223,7.49999014580279,4.79334777003293,3.55905928666645,2.83145747136345,3.92442930250692,3.46272441251751,5.90524363699719,11.2193419042757,1.2347220339942,0,11.4079531339648,3.9313088667105,4.72631925345123,0,2.33678033231916,0.171567810298526,2.52425656439839,0,0.402115889646523,1.94435734832912,0,0,0,0.811512834825538,0,7.65142173133691,4.62985512576611,6.65889532821094,1.58040879591855,5.15091697256924,0,0,0,7.49870671894216,3.35964256397719,5.38745369521069,0.806026704325635,1.45316969256981,2.30029607499127,0.492663237895943,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,1.91381625495949,0,0,0.414415513436035,1.71768088406796,3.00102312635806,0,0,0.178428988797162,0.315404830067869,0,0,0,2.0694614258501,0,0,0,0.195801157462741,0,0,0,0,1.21251028578504,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,2.29632954224082,4.0101294060657,0.460404944679482,0.114814448164607,0,0.393373244878272,1.35359883872224,1.38627606787947,3.13739907670742,5.84556898613043,2.21658420675039,10.2360045663807,2.89159298970077,4.31831832204279,13.880452742126,1.08378575017541,2.50844886927427,0.509752546090077,1.66215201785745,2.0148727924996,0,0,0,0.328014645699706,0.325378394664303,2.7821073144885,0.54941678891006,0.82509499920588,4.01985876597321,4.55042172225565,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,3.14041339185858,2.30628080838127,4.21121951232128,2.32662895967765,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,1.15466535270614,4.02181365321472,3.26672954583968,3.48332062874083,4.73555909938353,6.73885902670502,8.42517291719684,2.98640420269047,0,0,0.569647187174163,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0.957526850661834,1.05836791361941,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0.748562161632879,1.46508179271894,0.121360521749513,0,0,5.72986763370456,1.78178808499583,1.84296421259539,0.994147647766298,0.281338832821026,0,0,1.47787785689595,1.79323189425963,0,1.25966373927138,3.57940388757542,0,0,0.718946809178615,2.32727527078292,0,0.394573622547734,0,0,2.90799823828566,0.74214478529481,0,2.08342208868187,4.63537999979837,0,1.0241410345695,4.83081935556256,6.38246740773428,1.03423011972439,0,0.347249989866585,0,1.32656082487949,0,0.221158519862449,0.886642856860642,0.658156191461918,1.30726156222788,8.08657716815899,1.23120413606075,2.39278317278703,4.84184199214926,14.6304960387929,7.17072654685253,7.97502899329799,1.4655614944298,12.2597998484286,0,0.156980256395025,0,0,0,0,0,0.158936578980379,4.21996129056054,3.26465616318295,1.55488378577335,1.08194319871046,0,4.0690479671536,12.8316330436061,0,0,0,1.7524294574976,0,0.468528891450678,0,1.9566461893209,0.485560759068186,1.18375320854817,2.41981432097328,0,1.83241080922615,0,0.103688191397247,1.32930774541437,0.661983911750998,0.313932918407225,0,0.569219092059585,1.24807205711825,1.909157121686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| |||
|short_description=p3@EFNA1 | |||
}} |
Revision as of 21:14, 10 January 2014
Short description: | p3@EFNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFNA1_5end |
Coexpression cluster: | C3876_colon_liver_Hepatocyte_choriocarcinoma_chorionic_Renal_serous |
Association with transcript: | 23bp_to_ENST00000469878_5end |
EntrezGene: | EFNA1 |
HGNC: | 3221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.33e-49 | 253 |
endodermal cell | 1.31e-21 | 58 |
endothelial cell of vascular tree | 6.47e-20 | 24 |
endothelial cell | 5.19e-19 | 36 |
meso-epithelial cell | 2.86e-17 | 45 |
endo-epithelial cell | 9.75e-16 | 42 |
blood vessel endothelial cell | 1.56e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.56e-14 | 18 |
lining cell | 2.54e-13 | 58 |
barrier cell | 2.54e-13 | 58 |
squamous epithelial cell | 1.25e-12 | 63 |
epithelial cell of alimentary canal | 1.82e-09 | 20 |
embryonic cell | 1.36e-07 | 250 |
endothelial cell of artery | 1.66e-07 | 9 |
hepatocyte | 2.43e-07 | 12 |
epithelial cell of nephron | 3.65e-07 | 15 |
lymphangioblast | 5.51e-07 | 6 |
endothelial cell of lymphatic vessel | 5.51e-07 | 6 |
vascular lymphangioblast | 5.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.64e-19 | 106 |
cell type cancer | 2.13e-13 | 143 |
adenocarcinoma | 1.21e-07 | 25 |