FFCP PHASE1:Hg19::chr1:1361245..1361298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643965 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37099 | |||
|TSSclassifier=weak | |||
|UniProt=A6NKF7 | |||
|association_with_transcript=-209bp_to_NM_001146685,uc010nyp.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_TMEM88B_5end | |||
|id=chr1:1361245..1361298,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.68e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.38e-18;82!UBERON:0006241;4.55e-10;3!UBERON:0003057;4.55e-10;3!UBERON:0006215;9.16e-09;3!UBERON:0002532;3.50e-08;206!UBERON:0010316;3.50e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-48!57;UBERON:0005068!2.24e-48!57;UBERON:0006241!2.24e-48!57;UBERON:0007135!2.24e-48!57;UBERON:0005743!1.85e-46!86;UBERON:0001017!2.07e-44!82;UBERON:0000073!3.55e-42!94;UBERON:0001016!3.55e-42!94;UBERON:0003075!6.29e-40!86;UBERON:0007284!6.29e-40!86;UBERON:0000955!3.92e-39!69;UBERON:0006238!3.92e-39!69;UBERON:0002616!4.88e-39!59;UBERON:0007023!6.89e-39!115;UBERON:0002346!2.52e-37!90;UBERON:0002020!1.96e-32!34;UBERON:0003528!1.96e-32!34;UBERON:0001893!2.35e-32!34;UBERON:0002780!3.46e-32!41;UBERON:0001890!3.46e-32!41;UBERON:0006240!3.46e-32!41;UBERON:0003080!3.67e-31!42;UBERON:0002791!5.14e-31!33;UBERON:0001869!2.29e-29!32;UBERON:0000153!5.70e-27!129;UBERON:0007811!5.70e-27!129;UBERON:0004121!2.39e-26!169;UBERON:0003056!3.48e-26!61;UBERON:0000924!3.10e-25!173;UBERON:0006601!3.10e-25!173;UBERON:0000033!9.03e-25!123;UBERON:0002619!1.51e-21!22;UBERON:0000956!4.49e-20!25;UBERON:0000203!4.49e-20!25;UBERON:0001950!6.00e-19!20;UBERON:0003076!1.79e-18!15;UBERON:0003057!1.79e-18!15;UBERON:0004732!1.12e-15!13;UBERON:0002308!1.44e-14!9;UBERON:0000125!1.44e-14!9;UBERON:0004733!3.72e-14!12;UBERON:0002028!3.72e-14!12;UBERON:0007277!3.72e-14!12;UBERON:0002420!3.76e-14!9;UBERON:0007245!3.76e-14!9;UBERON:0010009!3.76e-14!9;UBERON:0010011!3.76e-14!9;UBERON:0000454!3.76e-14!9;UBERON:0009663!1.45e-11!7;UBERON:0000064!5.67e-11!219;UBERON:0000025!9.68e-11!194;UBERON:0002298!2.53e-10!8;UBERON:0002680!6.55e-10!9;UBERON:0001895!6.55e-10!9;UBERON:0010092!6.55e-10!9;UBERON:0000200!1.01e-09!6;UBERON:0000349!2.68e-08!5;UBERON:0000483!4.69e-08!309;UBERON:0000119!8.41e-08!312;UBERON:0004111!2.58e-07!241;UBERON:0001871!5.18e-07!7;UBERON:0000369!6.04e-07!4;UBERON:0002435!6.04e-07!4;UBERON:0000204!6.04e-07!4;UBERON:0010082!6.04e-07!4;UBERON:0000475!7.71e-07!365;UBERON:0000062!9.39e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.82e-51;34!UBERON:0003528;2.04e-49;34!UBERON:0002020;2.04e-49;34!UBERON:0002791;6.24e-48;32!UBERON:0001869;1.11e-47;32!UBERON:0000073;1.16e-43;53!UBERON:0002616;1.16e-43;53!UBERON:0002780;7.51e-43;41!UBERON:0001890;7.51e-43;41!UBERON:0002619;3.22e-41;22!UBERON:0001950;3.40e-36;20!UBERON:0000956;7.56e-36;25!UBERON:0000203;7.56e-36;25!UBERON:0001017;2.83e-29;75!UBERON:0000955;5.48e-28;68!UBERON:0000125;2.64e-26;9!UBERON:0002308;2.64e-26;9!UBERON:0002420;1.61e-25;9!UBERON:0007245;1.61e-25;9!UBERON:0010009;1.61e-25;9!UBERON:0010011;1.61e-25;9!UBERON:0000454;1.61e-25;9!UBERON:0001016;4.21e-23;83!UBERON:0004732;1.99e-21;13!UBERON:0009663;1.37e-20;7!UBERON:0004733;1.06e-18;12!UBERON:0002028;1.06e-18;12!UBERON:0002298;1.52e-18;6!UBERON:0000200;4.57e-17;6!UBERON:0007023;1.12e-15;114!UBERON:0000349;2.18e-14;5!UBERON:0000369;8.00e-12;4!UBERON:0002435;8.00e-12;4!UBERON:0000204;8.00e-12;4!UBERON:0002680;3.04e-11;9!UBERON:0001895;3.04e-11;9!UBERON:0001871;3.20e-10;6!UBERON:0000988;3.27e-10;3!UBERON:0002240;4.55e-10;3!UBERON:0005174;4.55e-10;3!UBERON:0001137;4.55e-10;3!UBERON:0001896;4.75e-10;3!UBERON:0005290;4.75e-10;3!UBERON:0001872;8.46e-10;5!UBERON:0002021;8.46e-10;5!UBERON:0011216;1.11e-09;132!UBERON:0001870;2.34e-09;3!UBERON:0005383;3.35e-09;3!UBERON:0005382;3.35e-09;3!UBERON:0000473;3.39e-08;8!UBERON:0005162;1.20e-07;2!UBERON:0000122;1.20e-07;2!UBERON:0001875;1.53e-07;2!UBERON:0006514;1.53e-07;2!UBERON:0001897;1.63e-07;2!UBERON:0010225;1.63e-07;2!UBERON:0002148;2.05e-07;2!UBERON:0006331;2.05e-07;2!UBERON:0009662;2.05e-07;2!UBERON:0002771;7.64e-07;2!UBERON:0001954;8.34e-07;2!UBERON:0003022;8.34e-07;2!UBERON:0002421;8.34e-07;2!UBERON:0002600;8.34e-07;2!UBERON:0010314;8.50e-07;132!UBERON:0002702;9.36e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,5.56661070865279,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.795178609928912,0.813357600086629,0.207322110030741,2.27088765788066,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0.606802608747567,0,0,0.95497793895076,1.18785872333055,0.614321404198464,7.95318118213038,20.6784042123454,0,0,1.68900326502395,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,39.742642589904,36.2723263812838,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,21.2577932595321,11.81845098529,4.5774520895125,3.87027409759286,6.79759523593159,6.58156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,3.55825354416746,9.76155117677373,5.01225357626186,90.2501170611266,0,64.4227225744683,0,0.391329237864179,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.290967049465258,0,0,0,0,22.2854001764693,0,0.400794101257669,0,0,0,1.25990255782507,0.171594997861965,0,0,0.471388069233591,0.271808412147228,0.104602846312333,0,0,63.6445506032377,74.2027153594602,0,0,4.20619766846903,0,0,0,0,0,0,0.0671834724867263,0,0,1.3393140992228,1.15382201733633,0.539228350833479,0.0984274815147488,0,19.0855125554233,23.1545790389679,0.482259445395058,0.550157746388935,0.415440338029185,0,0.77380195455795,15.9771334010605,0,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,46.9297131592429,50.3806212639649,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,2.04170325125305,7.97461361970287,14.7651780531375,26.039713586952,32.110914958644,34.1661478733505,47.1932662354514,0,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0342715918635,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,23.3794379351113,9.91876034279095,35.7579844288019,38.5618764772619,0,21.9920062836213,32.2951291263702,158.474056487661,0.196295437002051,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,22.0172525855967,23.4323429584154,30.3829590856741,28.4102829668703,0,0,0,0,0,0,0,0,0,0,0,0,36.0919282106976,21.5734697286145,0,0,0.235479278551542,15.2402122218522,0,0,0,0,0.285906176706625,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0,0,1.94284397223656,0,0.795803100645473,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,46.721415173357,40.9924032451379,29.1632452032546,0,0,0,0,0,0,0,0,0,80.2701665648127,0.315543124386369,24.748902429493,0,0,0,0,0,0.630832124175395,0.655593431782173,2.02717601618299,2.14176542458162,2.93939145792117,23.5250942809203,0,1.13668047327359,2.41167717140561,55.5543524437382,72.7133960909123,0.213233981900981,0,0.581300188524055,0.434523000071005,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@TMEM88B | |||
}} |
Revision as of 15:48, 10 January 2014
Short description: | p1@TMEM88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM88B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -209bp_to_NM_001146685, uc010nyp.1_5end |
EntrezGene: | TMEM88B |
HGNC: | 37099 |
UniProt: | A6NKF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data