FFCP PHASE1:Mm9::chr7:53922797..53922805,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21990|HGNC=|MCL_coexpression_id=46|UniProt=P17532|association_with_transcript=-50bp_to_ENSMUST00000107669_5end|description=CAGE_peak_3_at_Tph1_5end|id=chr7:53922797..53922805,-|ontology_enrichment_celltype=CL:0000107!2.67e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!2.67e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.61e-16,2;UBERON:0000059,9.61e-16,2;UBERON:0002465,2.21e-10,3;UBERON:0000305,4.39e-09,1;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0000160,2.29e-08,31;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0000344,3.66e-08,15;UBERON:0004923,8.88e-08,24|phase1_expression=0,0,0,0,0,1.84667199103079,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77305614563364,3.13439746966722,1.43993180514066,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0.230615497256059,0,0,0,29.4162011603905,0.144599356919912,0,0,0,0,5.59175283654366,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,3.96502539580558,0.264450566663544,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0.58489226135736,0,0.648414149624083,1.59313018603494,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0.315508219416257,0,0.430846795465598,0,1.11399337041197,0.566153061577665,0.809621403349789,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p3@Tph1}} | ||
|EntrezGene=21990 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=P17532 | |||
|association_with_transcript=-50bp_to_ENSMUST00000107669_5end | |||
|description=CAGE_peak_3_at_Tph1_5end | |||
|id=chr7:53922797..53922805,- | |||
|ontology_enrichment_celltype=CL:0000107!2.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.67e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.61e-16,2;UBERON:0000059,9.61e-16,2;UBERON:0002465,2.21e-10,3;UBERON:0000305,4.39e-09,1;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0000160,2.29e-08,31;UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0000344,3.66e-08,15;UBERON:0004923,8.88e-08,24 | |||
|phase1_expression=0,0,0,0,0,1.84667199103079,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77305614563364,3.13439746966722,1.43993180514066,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0.230615497256059,0,0,0,29.4162011603905,0.144599356919912,0,0,0,0,5.59175283654366,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,3.96502539580558,0.264450566663544,0,0,0.128867461322093,0,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0.58489226135736,0,0.648414149624083,1.59313018603494,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0.315508219416257,0,0.430846795465598,0,1.11399337041197,0.566153061577665,0.809621403349789,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.777689839750757,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@Tph1 | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p3@Tph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | -50bp_to_ENSMUST00000107669_5end |
EntrezGene: | Tph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 9.61e-16 | 2 |
large intestine | 9.61e-16 | 2 |
lymphoid system | 2.21e-10 | 3 |
amnion | 4.39e-09 | 1 |
caecum | 5.23e-09 | 1 |
midgut | 5.23e-09 | 1 |
intestine | 2.29e-08 | 31 |
lymph node | 2.89e-08 | 1 |
axillary lymph node | 2.89e-08 | 1 |
peripheral lymph node | 2.89e-08 | 1 |
shoulder | 2.89e-08 | 1 |
mucosa | 3.66e-08 | 15 |
organ component layer | 8.88e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.