FFCP PHASE1:Mm9::chr6:47506097..47506113,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:47506097..47506113,-|id=chr6:47506097..47506113,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.40e-15,29;UBERON:0005057,3.40e-15,29;UBERON:0000077,3.89e-12,35;UBERON:0000072,2.07e-11,27;UBERON:0002370,3.07e-11,23;UBERON:0000974,3.07e-11,23;UBERON:0004807,3.07e-11,23;UBERON:0005058,3.07e-11,23;UBERON:0003351,3.07e-11,23;UBERON:0009113,3.07e-11,23;UBERON:0003295,3.07e-11,23;UBERON:0009722,3.07e-11,23;UBERON:0005562,3.07e-11,23;UBERON:0007690,3.07e-11,23;UBERON:0006562,1.07e-10,24;UBERON:0003408,1.07e-10,24;UBERON:0001557,1.07e-10,24;UBERON:0001042,1.07e-10,24;UBERON:0008814,1.07e-10,24;UBERON:0009145,1.07e-10,24;UBERON:0002390,1.94e-10,45;UBERON:0003061,1.94e-10,45;UBERON:0007811,1.22e-09,36;UBERON:0002193,1.32e-09,48;UBERON:0002405,1.32e-09,48;UBERON:0000065,2.97e-08,41;UBERON:0001004,5.29e-08,42;UBERON:0000153,1.07e-07,43;UBERON:0001041,1.55e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0.174840804837995,0.333109761815663,0.202475267389826,1.39912375625629,0,0.137114433605739,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,1.24427534770173,1.62007125998029,0.630974884054146,0,0,0.489963196859816,0.958454710182364,1.83843757322004,0,0.383062014255563,0.153606533256243,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,0,0,0.883885756421003,0.284743361598206,0.372798891650601,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,1.51657333504435,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0,0.508280908292259,0,0,0.376963056338593,0,0,0,0,0.712875546952214,0.497627882440372,0,0,1.56144531555244,0.229902104433473,0,1.20563854268572,0.408218994907967,0.512454881139399,0.281105173679186,0,0.431135985865684,0.945530400839096,0.351902248327898,0.876782929710299,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0.852490498186778,0.207125772535502,1.40715635988658,0.540186184383045,0,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.822799249567402,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0.823236899034275,0,0.528901133327089,1.06644125267617,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,1.22190796707189,0.387904974335251,0.280543279561274,0.189709611372772,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,5.75072826109418,1.11642284300551,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.814824882210129,0.848725428875941,1.40814148973101,0,0.476087281772027,0.390267295715598,0.315270288212382,0,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.891844088010353,0.164549020602121,0,0.23467170806371,0.63549621259146,0,0,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0,0.555583582109135,2.44878994106098,2.05041341581538,1.37266903923914,0.339956859987711,0,0.276399947608848,0,0.316335993581135,0.609958401380546,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,1.85851738039856,0.117357238645754,1.3020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0.608175645870493,0.616265742988964,1.29920822977795,0.895133478337407,1.19208812868759,1.80293174279953,1.03382669022204,2.1202954489111,1.21930890648,2.21817607301049,1.26695244961678,1.53938946624527,1.05189211963412,0,0.443971906748129,1.07656627931371,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.726511433089237,0.399024873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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:47506097..47506113,- | |||
|id=chr6:47506097..47506113,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.40e-15,29;UBERON:0005057,3.40e-15,29;UBERON:0000077,3.89e-12,35;UBERON:0000072,2.07e-11,27;UBERON:0002370,3.07e-11,23;UBERON:0000974,3.07e-11,23;UBERON:0004807,3.07e-11,23;UBERON:0005058,3.07e-11,23;UBERON:0003351,3.07e-11,23;UBERON:0009113,3.07e-11,23;UBERON:0003295,3.07e-11,23;UBERON:0009722,3.07e-11,23;UBERON:0005562,3.07e-11,23;UBERON:0007690,3.07e-11,23;UBERON:0006562,1.07e-10,24;UBERON:0003408,1.07e-10,24;UBERON:0001557,1.07e-10,24;UBERON:0001042,1.07e-10,24;UBERON:0008814,1.07e-10,24;UBERON:0009145,1.07e-10,24;UBERON:0002390,1.94e-10,45;UBERON:0003061,1.94e-10,45;UBERON:0007811,1.22e-09,36;UBERON:0002193,1.32e-09,48;UBERON:0002405,1.32e-09,48;UBERON:0000065,2.97e-08,41;UBERON:0001004,5.29e-08,42;UBERON:0000153,1.07e-07,43;UBERON:0001041,1.55e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0.174840804837995,0.333109761815663,0.202475267389826,1.39912375625629,0,0.137114433605739,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0,1.24427534770173,1.62007125998029,0.630974884054146,0,0,0.489963196859816,0.958454710182364,1.83843757322004,0,0.383062014255563,0.153606533256243,0.527545150920775,0.274462930807229,0.52091337055676,0.558365998002762,0,0,0.883885756421003,0.284743361598206,0.372798891650601,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,1.51657333504435,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0,0.508280908292259,0,0,0.376963056338593,0,0,0,0,0.712875546952214,0.497627882440372,0,0,1.56144531555244,0.229902104433473,0,1.20563854268572,0.408218994907967,0.512454881139399,0.281105173679186,0,0.431135985865684,0.945530400839096,0.351902248327898,0.876782929710299,0.278047249225598,0.348252166522167,0,0,0,0.257347907114715,0.852490498186778,0.207125772535502,1.40715635988658,0.540186184383045,0,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.822799249567402,0.492502392237286,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0.823236899034275,0,0.528901133327089,1.06644125267617,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,1.22190796707189,0.387904974335251,0.280543279561274,0.189709611372772,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,5.75072826109418,1.11642284300551,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.814824882210129,0.848725428875941,1.40814148973101,0,0.476087281772027,0.390267295715598,0.315270288212382,0,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.891844088010353,0.164549020602121,0,0.23467170806371,0.63549621259146,0,0,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0,0,0.555583582109135,2.44878994106098,2.05041341581538,1.37266903923914,0.339956859987711,0,0.276399947608848,0,0.316335993581135,0.609958401380546,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.387479470433193,1.85851738039856,0.117357238645754,1.3020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0.608175645870493,0.616265742988964,1.29920822977795,0.895133478337407,1.19208812868759,1.80293174279953,1.03382669022204,2.1202954489111,1.21930890648,2.21817607301049,1.26695244961678,1.53938946624527,1.05189211963412,0,0.443971906748129,1.07656627931371,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0,0.37456602987953,0.128050304809739,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0.154936841185966,0,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr6:47506097..47506113,- | |||
}} |
Revision as of 10:04, 14 September 2013
Short description: | p@chr6:47506097..47506113, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:47506097..47506113, - |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.40e-15 | 29 |
immune organ | 3.40e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 3.89e-12 | 35 |
segment of respiratory tract | 2.07e-11 | 27 |
thymus | 3.07e-11 | 23 |
neck | 3.07e-11 | 23 |
respiratory system epithelium | 3.07e-11 | 23 |
hemolymphoid system gland | 3.07e-11 | 23 |
pharyngeal epithelium | 3.07e-11 | 23 |
thymic region | 3.07e-11 | 23 |
pharyngeal gland | 3.07e-11 | 23 |
entire pharyngeal arch endoderm | 3.07e-11 | 23 |
thymus primordium | 3.07e-11 | 23 |
early pharyngeal endoderm | 3.07e-11 | 23 |
pharynx | 1.07e-10 | 24 |
gland of gut | 1.07e-10 | 24 |
upper respiratory tract | 1.07e-10 | 24 |
chordate pharynx | 1.07e-10 | 24 |
pharyngeal arch system | 1.07e-10 | 24 |
pharyngeal region of foregut | 1.07e-10 | 24 |
hematopoietic system | 1.94e-10 | 45 |
blood island | 1.94e-10 | 45 |
craniocervical region | 1.22e-09 | 36 |
hemolymphoid system | 1.32e-09 | 48 |
immune system | 1.32e-09 | 48 |
respiratory tract | 2.97e-08 | 41 |
respiratory system | 5.29e-08 | 42 |
anterior region of body | 1.07e-07 | 43 |
foregut | 1.55e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.