FFCP PHASE1:Hg19::chr9:74764064..74764081,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9615|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4212|TSSclassifier=W|UniProt=Q9Y2T3|association_with_transcript=-185bp_to_NM_001242505,NM_001242506,NM_004293_5end|coexpression_cluster_id=C25|description=CAGE_peak_11_at_GDA_5end|id=chr9:74764064..74764081,+|ontology_enrichment_celltype=CL:0002150!5.75e-15!3;CL:0000861!5.75e-15!3;CL:0002541!1.80e-07!3;CL:0002178!2.63e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.53e-16!106;DOID:0050687!8.13e-11!143;DOID:3493!4.63e-10!2;DOID:299!2.13e-08!25;DOID:162!8.02e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.27e-14!35;UBERON:0001737!6.31e-13!9;UBERON:0000160!1.19e-12!27;UBERON:0004921!2.44e-11!129;UBERON:0004185!2.44e-11!129;UBERON:0001007!1.13e-08!155;UBERON:0001555!1.13e-08!155;UBERON:0007026!1.13e-08!155;UBERON:0002108!6.56e-08!14;UBERON:0004119!1.38e-07!169;UBERON:0000925!1.38e-07!169;UBERON:0006595!1.38e-07!169;UBERON:0000476!1.80e-07!3;UBERON:0000920!1.80e-07!3;UBERON:0000200!3.36e-07!6;UBERON:0002771!7.09e-07!3|ontology_enrichment_uberon_v019=UBERON:0002108;9.01e-60;4!UBERON:0000160;5.51e-46;17!UBERON:0005409;3.74e-36;22!UBERON:0004921;1.37e-19;33!UBERON:0000059;5.42e-13;11!UBERON:0002114;2.07e-12;2!UBERON:0001555;4.70e-10;54!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.37e-60,4;UBERON:0000160,5.02e-46,17;UBERON:0005409,4.31e-32,25;UBERON:0000059,5.42e-13,11;UBERON:0002114,2.07e-12,2;UBERON:0001052,1.57e-09,4;UBERON:0004907,7.01e-08,5;UBERON:0004921,2.19e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.723033089650446,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,2.56526937059684,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0.347119476670262,0.195984794828755,0,0,0,0.19351266257817,0.438535902517113,0.246346371159628,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,6.25110680674352,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p11@GDA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4212 | |||
|TSSclassifier=W | |||
|UniProt=Q9Y2T3 | |||
|association_with_transcript=-185bp_to_NM_001242505,NM_001242506,NM_004293_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_11_at_GDA_5end | |||
|id=chr9:74764064..74764081,+ | |||
|ontology_enrichment_celltype=CL:0002150!5.75e-15!3;CL:0000861!5.75e-15!3;CL:0002541!1.80e-07!3;CL:0002178!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.53e-16!106;DOID:0050687!8.13e-11!143;DOID:3493!4.63e-10!2;DOID:299!2.13e-08!25;DOID:162!8.02e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.27e-14!35;UBERON:0001737!6.31e-13!9;UBERON:0000160!1.19e-12!27;UBERON:0004921!2.44e-11!129;UBERON:0004185!2.44e-11!129;UBERON:0001007!1.13e-08!155;UBERON:0001555!1.13e-08!155;UBERON:0007026!1.13e-08!155;UBERON:0002108!6.56e-08!14;UBERON:0004119!1.38e-07!169;UBERON:0000925!1.38e-07!169;UBERON:0006595!1.38e-07!169;UBERON:0000476!1.80e-07!3;UBERON:0000920!1.80e-07!3;UBERON:0000200!3.36e-07!6;UBERON:0002771!7.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;9.01e-60;4!UBERON:0000160;5.51e-46;17!UBERON:0005409;3.74e-36;22!UBERON:0004921;1.37e-19;33!UBERON:0000059;5.42e-13;11!UBERON:0002114;2.07e-12;2!UBERON:0001555;4.70e-10;54!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.37e-60,4;UBERON:0000160,5.02e-46,17;UBERON:0005409,4.31e-32,25;UBERON:0000059,5.42e-13,11;UBERON:0002114,2.07e-12,2;UBERON:0001052,1.57e-09,4;UBERON:0004907,7.01e-08,5;UBERON:0004921,2.19e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.723033089650446,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,2.56526937059684,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0.347119476670262,0.195984794828755,0,0,0,0.19351266257817,0.438535902517113,0.246346371159628,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,6.25110680674352,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p11@GDA | |||
}} |
Revision as of 09:21, 14 September 2013
Short description: | p11@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_GDA_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -185bp_to_NM_001242505, NM_001242506, NM_004293_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | Q9Y2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 7.37e-60 | 4 |
intestine | 5.02e-46 | 17 |
gastrointestinal system | 4.31e-32 | 25 |
large intestine | 5.42e-13 | 11 |
duodenum | 2.07e-12 | 2 |
rectum | 1.57e-09 | 4 |
lower digestive tract | 7.01e-08 | 5 |
subdivision of digestive tract | 2.19e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.