FFCP PHASE1:Hg19::chr9:34458851..34458908,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2954|TSSclassifier=S|UniProt=B7Z7U1|association_with_transcript=0bp_to_ENST00000545019_5end|coexpression_cluster_id=C1|description=CAGE_peak_2_at_DNAI1_5end|id=chr9:34458851..34458908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;3.70e-07;2|ontology_enrichment_celltype_v019_2=CL:0002535,3.48e-07,2|ontology_enrichment_development_v019=UBERON:0010122;4.83e-07;2!UBERON:0006965;4.83e-07;2!UBERON:0007297;4.83e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.47e-30!57;UBERON:0005068!1.47e-30!57;UBERON:0006241!1.47e-30!57;UBERON:0007135!1.47e-30!57;UBERON:0002616!4.12e-27!59;UBERON:0002780!4.46e-26!41;UBERON:0001890!4.46e-26!41;UBERON:0006240!4.46e-26!41;UBERON:0003080!2.69e-25!42;UBERON:0000073!5.33e-25!94;UBERON:0001016!5.33e-25!94;UBERON:0001017!3.87e-24!82;UBERON:0005743!4.69e-24!86;UBERON:0000955!5.39e-23!69;UBERON:0006238!5.39e-23!69;UBERON:0001893!7.41e-22!34;UBERON:0002020!7.50e-22!34;UBERON:0003528!7.50e-22!34;UBERON:0007023!2.90e-21!115;UBERON:0001869!5.29e-21!32;UBERON:0002791!2.50e-20!33;UBERON:0002346!1.53e-18!90;UBERON:0003075!1.60e-18!86;UBERON:0007284!1.60e-18!86;UBERON:0003056!9.48e-17!61;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000153!1.14e-12!129;UBERON:0007811!1.14e-12!129;UBERON:0002619!1.72e-12!22;UBERON:0000033!9.00e-12!123;UBERON:0000924!5.05e-11!173;UBERON:0006601!5.05e-11!173;UBERON:0004121!8.52e-11!169;UBERON:0002298!4.34e-10!8;UBERON:0000369!6.51e-10!4;UBERON:0002435!6.51e-10!4;UBERON:0000204!6.51e-10!4;UBERON:0010082!6.51e-10!4;UBERON:0001950!1.43e-09!20;UBERON:0002308!6.19e-09!9;UBERON:0000125!6.19e-09!9;UBERON:0000025!3.55e-08!194;UBERON:0001896!4.62e-08!3;UBERON:0005290!4.62e-08!3;UBERON:0010096!4.62e-08!3;UBERON:0005383!6.21e-08!3;UBERON:0005382!6.21e-08!3;UBERON:0000349!7.20e-08!5;UBERON:0000988!2.26e-07!3;UBERON:0001872!4.02e-07!5|ontology_enrichment_uberon_v019=UBERON:0000007;7.09e-25;2!UBERON:0001896;1.55e-16;3!UBERON:0005290;1.55e-16;3!UBERON:0003296;6.07e-13;4!UBERON:0010133;6.07e-13;4!UBERON:0001301;8.15e-13;1!UBERON:0002171;8.15e-13;1!UBERON:0006518;8.15e-13;1!UBERON:0008949;8.15e-13;1!UBERON:0000101;8.15e-13;1!UBERON:0002167;8.15e-13;1!UBERON:0003135;2.47e-10;11!UBERON:0002298;9.82e-09;6!UBERON:0001894;8.94e-08;7!UBERON:0003127;3.70e-07;2!UBERON:0006955;3.70e-07;2!UBERON:0004801;3.70e-07;2!UBERON:0001873;4.83e-07;2!UBERON:0000473;5.54e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.09e-25,2;UBERON:0001896,1.37e-16,3;UBERON:0005290,1.37e-16,3;UBERON:0010096,1.37e-16,3;UBERON:0001301,6.06e-13,1;UBERON:0003296,6.07e-13,4;UBERON:0010133,6.07e-13,4;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0007023,5.40e-11,114;UBERON:0003135,2.28e-10,11;UBERON:0002298,9.27e-09,6;UBERON:0001894,8.94e-08,7;UBERON:0006222,8.94e-08,7;UBERON:0000073,1.78e-07,53;UBERON:0002616,1.78e-07,53;UBERON:0006955,3.48e-07,2;UBERON:0004801,3.48e-07,2;UBERON:0003127,3.70e-07,2;UBERON:0001049,4.63e-07,56;UBERON:0005068,4.63e-07,56;UBERON:0006241,4.63e-07,56;UBERON:0007135,4.63e-07,56;UBERON:0001873,4.69e-07,2;UBERON:0010122,4.69e-07,2;UBERON:0000473,5.54e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6292043908897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09315525111078,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0,0,0,0,1.19548792950642,0,2.51932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.964771509003264,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0.652931232636591,0.141353071433941,0.432777279484182,0,0,0,0,0.123563938946503,0.104421949505455,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2954 | |||
|TSSclassifier=S | |||
|UniProt=B7Z7U1 | |||
|association_with_transcript=0bp_to_ENST00000545019_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_DNAI1_5end | |||
|id=chr9:34458851..34458908,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.83e-07;2!UBERON:0006965;4.83e-07;2!UBERON:0007297;4.83e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-30!57;UBERON:0005068!1.47e-30!57;UBERON:0006241!1.47e-30!57;UBERON:0007135!1.47e-30!57;UBERON:0002616!4.12e-27!59;UBERON:0002780!4.46e-26!41;UBERON:0001890!4.46e-26!41;UBERON:0006240!4.46e-26!41;UBERON:0003080!2.69e-25!42;UBERON:0000073!5.33e-25!94;UBERON:0001016!5.33e-25!94;UBERON:0001017!3.87e-24!82;UBERON:0005743!4.69e-24!86;UBERON:0000955!5.39e-23!69;UBERON:0006238!5.39e-23!69;UBERON:0001893!7.41e-22!34;UBERON:0002020!7.50e-22!34;UBERON:0003528!7.50e-22!34;UBERON:0007023!2.90e-21!115;UBERON:0001869!5.29e-21!32;UBERON:0002791!2.50e-20!33;UBERON:0002346!1.53e-18!90;UBERON:0003075!1.60e-18!86;UBERON:0007284!1.60e-18!86;UBERON:0003056!9.48e-17!61;UBERON:0000956!1.26e-14!25;UBERON:0000203!1.26e-14!25;UBERON:0000153!1.14e-12!129;UBERON:0007811!1.14e-12!129;UBERON:0002619!1.72e-12!22;UBERON:0000033!9.00e-12!123;UBERON:0000924!5.05e-11!173;UBERON:0006601!5.05e-11!173;UBERON:0004121!8.52e-11!169;UBERON:0002298!4.34e-10!8;UBERON:0000369!6.51e-10!4;UBERON:0002435!6.51e-10!4;UBERON:0000204!6.51e-10!4;UBERON:0010082!6.51e-10!4;UBERON:0001950!1.43e-09!20;UBERON:0002308!6.19e-09!9;UBERON:0000125!6.19e-09!9;UBERON:0000025!3.55e-08!194;UBERON:0001896!4.62e-08!3;UBERON:0005290!4.62e-08!3;UBERON:0010096!4.62e-08!3;UBERON:0005383!6.21e-08!3;UBERON:0005382!6.21e-08!3;UBERON:0000349!7.20e-08!5;UBERON:0000988!2.26e-07!3;UBERON:0001872!4.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.09e-25;2!UBERON:0001896;1.55e-16;3!UBERON:0005290;1.55e-16;3!UBERON:0003296;6.07e-13;4!UBERON:0010133;6.07e-13;4!UBERON:0001301;8.15e-13;1!UBERON:0002171;8.15e-13;1!UBERON:0006518;8.15e-13;1!UBERON:0008949;8.15e-13;1!UBERON:0000101;8.15e-13;1!UBERON:0002167;8.15e-13;1!UBERON:0003135;2.47e-10;11!UBERON:0002298;9.82e-09;6!UBERON:0001894;8.94e-08;7!UBERON:0003127;3.70e-07;2!UBERON:0006955;3.70e-07;2!UBERON:0004801;3.70e-07;2!UBERON:0001873;4.83e-07;2!UBERON:0000473;5.54e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.09e-25,2;UBERON:0001896,1.37e-16,3;UBERON:0005290,1.37e-16,3;UBERON:0010096,1.37e-16,3;UBERON:0001301,6.06e-13,1;UBERON:0003296,6.07e-13,4;UBERON:0010133,6.07e-13,4;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0007023,5.40e-11,114;UBERON:0003135,2.28e-10,11;UBERON:0002298,9.27e-09,6;UBERON:0001894,8.94e-08,7;UBERON:0006222,8.94e-08,7;UBERON:0000073,1.78e-07,53;UBERON:0002616,1.78e-07,53;UBERON:0006955,3.48e-07,2;UBERON:0004801,3.48e-07,2;UBERON:0003127,3.70e-07,2;UBERON:0001049,4.63e-07,56;UBERON:0005068,4.63e-07,56;UBERON:0006241,4.63e-07,56;UBERON:0007135,4.63e-07,56;UBERON:0001873,4.69e-07,2;UBERON:0010122,4.69e-07,2;UBERON:0000473,5.54e-07,8 | |||
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|short_description=p2@DNAI1 | |||
}} |
Revision as of 08:50, 14 September 2013
Short description: | p2@DNAI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DNAI1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000545019_5end |
EntrezGene: | DNAI1 |
HGNC: | 2954 |
UniProt: | B7Z7U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.09e-25 | 2 |
medulla oblongata | 1.37e-16 | 3 |
myelencephalon | 1.37e-16 | 3 |
future myelencephalon | 1.37e-16 | 3 |
epididymis | 6.06e-13 | 1 |
gland of diencephalon | 6.07e-13 | 4 |
neuroendocrine gland | 6.07e-13 | 4 |
lower lobe of right lung | 8.64e-13 | 1 |
right lung lobe | 8.64e-13 | 1 |
lower lobe of lung | 8.64e-13 | 1 |
lobe of lung | 8.64e-13 | 1 |
right lung | 8.64e-13 | 1 |
adult organism | 5.40e-11 | 114 |
male reproductive organ | 2.28e-10 | 11 |
brainstem | 9.27e-09 | 6 |
diencephalon | 8.94e-08 | 7 |
future diencephalon | 8.94e-08 | 7 |
regional part of nervous system | 1.78e-07 | 53 |
regional part of brain | 1.78e-07 | 53 |
uterine epithelium | 3.48e-07 | 2 |
cervix epithelium | 3.48e-07 | 2 |
open tracheal system trachea | 3.70e-07 | 2 |
neural tube | 4.63e-07 | 56 |
neural rod | 4.63e-07 | 56 |
future spinal cord | 4.63e-07 | 56 |
neural keel | 4.63e-07 | 56 |
caudate nucleus | 4.69e-07 | 2 |
future caudate nucleus | 4.69e-07 | 2 |
testis | 5.54e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.