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FFCP PHASE1:Mm9::chr5:65194752..65194769,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16599|HGNC=|UniProt=Q60980,Q545J5|association_with_transcript=0bp_to_ENSMUST00000165536,NM_008453,uc008xmr.1,uc008xms.1_5end|description=CAGE_peak_1_at_Klf3_5end|id=chr5:65194752..65194769,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.58e-26!128;UBERON:0001555!3.58e-26!128;UBERON:0007026!3.58e-26!128;UBERON:0004119!7.04e-26!130;UBERON:0000925!7.04e-26!130;UBERON:0006595!7.04e-26!130;UBERON:0004921!1.83e-25!126;UBERON:0004185!1.83e-25!126;UBERON:0000077!3.55e-13!97;UBERON:0001041!4.06e-13!92;UBERON:0005409!4.19e-13!59;UBERON:0005911!2.57e-12!69;UBERON:0003104!2.20e-11!131;UBERON:0009142!2.20e-11!131;UBERON:0003929!7.61e-11!55;UBERON:0000490!1.77e-10!66;UBERON:0005057!1.77e-09!51;UBERON:0000160!1.52e-08!43;UBERON:0004923!1.94e-08!24;UBERON:0002405!1.38e-07!70;UBERON:0000344!2.40e-07!15;UBERON:0001242!5.34e-07!13;UBERON:0000060!5.34e-07!13;UBERON:0001262!5.34e-07!13;UBERON:0004786!5.34e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.82e-27,116;UBERON:0001555,1.82e-27,116;UBERON:0007026,1.82e-27,116;UBERON:0004119,4.15e-27,118;UBERON:0000925,4.15e-27,118;UBERON:0006595,4.15e-27,118;UBERON:0004921,9.05e-27,114;UBERON:0005409,1.87e-15,47;UBERON:0001041,2.78e-14,80;UBERON:0005911,2.57e-12,69;UBERON:0003929,7.61e-11,55;UBERON:0000160,7.78e-11,31;UBERON:0000490,1.77e-10,66;UBERON:0004923,1.94e-08,24;UBERON:0000344,2.40e-07,15;UBERON:0001242,5.34e-07,13;UBERON:0001262,5.34e-07,13;UBERON:0004786,5.34e-07,13|phase1_expression=15.534438169165,204.499588876666,268.449551239826,195.391880504212,273.989964280652,119.02640378553,90.4080919104684,131.189296616641,62.2286151910367,78.4116163178678,4.10923123741212,9.09402612546835,86.9699708050525,89.4310716746343,66.9550621249482,106.501990647048,121.723766794298,49.8430221266016,51.6921414693635,47.5316410013794,27.3839394286445,5.16312946244604,2.08959831311148,62.2370524666352,52.9935439265163,179.734604768001,124.490216889973,116.569936883066,118.95466057969,118.454160987167,68.2929972818338,6.35030673459631,0.61506478758457,0,51.1267366959756,39.3976109499627,55.7382342596268,118.862983129282,82.8215465195228,36.6466620781659,115.293371654079,168.712234784736,70.8845115425484,46.455925832988,42.1728033873181,34.5067894063961,22.6893489860931,9.15705656797875,24.6048524662608,10.6936444490856,12.8787507895334,15.8127820801469,51.1736948476096,184.967346212893,277.613478091675,31.9001700684574,32.0917452731408,25.2679325215947,4.24864567805155,2.64495489636016,5.70448263155561,26.4298735013923,32.9039074561122,21.5975932147536,20.7661936139065,16.3410426437603,20.3728075152515,16.9056054341484,6.53244557543409,6.07526722492608,6.94072372459561,5.71301968807607,4.63823935998388,2.08234358665422,1.82106394934649,1.83843757322004,3.30347642998166,3.44755812830007,2.30409799884365,2.37395317914349,1.73826522844578,2.6045668527838,3.62937898701795,4.50210088025344,4.5839474333043,4.41942878210502,3.70166370077668,4.28718725398191,17.3412982732991,23.0493258325696,42.8999443278483,38.7190744641624,195.151772774124,25.3660500069774,45.4843492213368,42.1145273871495,34.2684385121475,16.8726019352277,11.4305842025262,8.48014978824817,4.78867627240714,32.0816193535795,58.6052051325285,28.4426681261332,39.6178605050522,34.9636614355636,34.88118670602,68.7386955908741,92.4408244620403,28.0555642832519,21.685665845767,22.2259799167863,24.6758582063983,20.7997243962619,29.7499429053333,21.2376539347152,65.0122765141403,51.9111691342483,105.268655682035,33.4857379391137,59.4063684658459,65.458159173255,195.711349279028,4.68449275218475,4.60782754989601,121.342101224081,5.87094110079009,1.79970819298022,8.00542430560307,5.09288173976397,4.11750542536764,3.64397621127307,4.34560800480691,4.34716277461562,6.44142938134636,4.70499662896497,30.2462910635439,52.8729625092895,12.1306924048164,20.8337437327609,14.9638509407109,11.0353010128067,17.2859644613135,22.9071323110287,22.9963367131488,23.1885833715578,17.4285207681096,22.2484898835553,9.26942369611222,14.7502742530899,12.6684809398043,17.9740500590611,30.8632446640414,88.4560502966303,95.6886934296937,11.3449532086541,2.80885274925294,2.83082697826187,9.09323198065896,24.8550927042602,26.735970837845,16.9258337773354,21.7805156738393,17.5120166255189,17.7407179820485,16.2773761325285,14.4867636755794,18.3321587516456,23.2029388378007,28.7293062138417,42.9664690593035,32.8949971706998,23.2723122208514,36.6383523215815,3.78521907415429,8.54108282748061,298.36816103437,120.325007831913,20.6889603019177,29.2618206544153,40.5932503164594,43.7653248432653,36.025243102869,45.0834733886765,106.294509785971,54.1859561041996,56.0477515624601,58.6921592521395,63.363328313714,111.453606673123,118.011375231583,139.598032551311,23.5188197181821,24.3349331858722,24.7957018480777,23.2162513743658,20.9468686141036,27.4231055771146,25.4210879239514,23.0271830848179,19.4678422523305,21.71790085023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|EntrezGene=16599
|HGNC=
|UniProt=Q60980,Q545J5
|association_with_transcript=0bp_to_ENSMUST00000165536,NM_008453,uc008xmr.1,uc008xms.1_5end
|description=CAGE_peak_1_at_Klf3_5end
|id=chr5:65194752..65194769,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.58e-26!128;UBERON:0001555!3.58e-26!128;UBERON:0007026!3.58e-26!128;UBERON:0004119!7.04e-26!130;UBERON:0000925!7.04e-26!130;UBERON:0006595!7.04e-26!130;UBERON:0004921!1.83e-25!126;UBERON:0004185!1.83e-25!126;UBERON:0000077!3.55e-13!97;UBERON:0001041!4.06e-13!92;UBERON:0005409!4.19e-13!59;UBERON:0005911!2.57e-12!69;UBERON:0003104!2.20e-11!131;UBERON:0009142!2.20e-11!131;UBERON:0003929!7.61e-11!55;UBERON:0000490!1.77e-10!66;UBERON:0005057!1.77e-09!51;UBERON:0000160!1.52e-08!43;UBERON:0004923!1.94e-08!24;UBERON:0002405!1.38e-07!70;UBERON:0000344!2.40e-07!15;UBERON:0001242!5.34e-07!13;UBERON:0000060!5.34e-07!13;UBERON:0001262!5.34e-07!13;UBERON:0004786!5.34e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.82e-27,116;UBERON:0001555,1.82e-27,116;UBERON:0007026,1.82e-27,116;UBERON:0004119,4.15e-27,118;UBERON:0000925,4.15e-27,118;UBERON:0006595,4.15e-27,118;UBERON:0004921,9.05e-27,114;UBERON:0005409,1.87e-15,47;UBERON:0001041,2.78e-14,80;UBERON:0005911,2.57e-12,69;UBERON:0003929,7.61e-11,55;UBERON:0000160,7.78e-11,31;UBERON:0000490,1.77e-10,66;UBERON:0004923,1.94e-08,24;UBERON:0000344,2.40e-07,15;UBERON:0001242,5.34e-07,13;UBERON:0001262,5.34e-07,13;UBERON:0004786,5.34e-07,13
|phase1_expression=15.534438169165,204.499588876666,268.449551239826,195.391880504212,273.989964280652,119.02640378553,90.4080919104684,131.189296616641,62.2286151910367,78.4116163178678,4.10923123741212,9.09402612546835,86.9699708050525,89.4310716746343,66.9550621249482,106.501990647048,121.723766794298,49.8430221266016,51.6921414693635,47.5316410013794,27.3839394286445,5.16312946244604,2.08959831311148,62.2370524666352,52.9935439265163,179.734604768001,124.490216889973,116.569936883066,118.95466057969,118.454160987167,68.2929972818338,6.35030673459631,0.61506478758457,0,51.1267366959756,39.3976109499627,55.7382342596268,118.862983129282,82.8215465195228,36.6466620781659,115.293371654079,168.712234784736,70.8845115425484,46.455925832988,42.1728033873181,34.5067894063961,22.6893489860931,9.15705656797875,24.6048524662608,10.6936444490856,12.8787507895334,15.8127820801469,51.1736948476096,184.967346212893,277.613478091675,31.9001700684574,32.0917452731408,25.2679325215947,4.24864567805155,2.64495489636016,5.70448263155561,26.4298735013923,32.9039074561122,21.5975932147536,20.7661936139065,16.3410426437603,20.3728075152515,16.9056054341484,6.53244557543409,6.07526722492608,6.94072372459561,5.71301968807607,4.63823935998388,2.08234358665422,1.82106394934649,1.83843757322004,3.30347642998166,3.44755812830007,2.30409799884365,2.37395317914349,1.73826522844578,2.6045668527838,3.62937898701795,4.50210088025344,4.5839474333043,4.41942878210502,3.70166370077668,4.28718725398191,17.3412982732991,23.0493258325696,42.8999443278483,38.7190744641624,195.151772774124,25.3660500069774,45.4843492213368,42.1145273871495,34.2684385121475,16.8726019352277,11.4305842025262,8.48014978824817,4.78867627240714,32.0816193535795,58.6052051325285,28.4426681261332,39.6178605050522,34.9636614355636,34.88118670602,68.7386955908741,92.4408244620403,28.0555642832519,21.685665845767,22.2259799167863,24.6758582063983,20.7997243962619,29.7499429053333,21.2376539347152,65.0122765141403,51.9111691342483,105.268655682035,33.4857379391137,59.4063684658459,65.458159173255,195.711349279028,4.68449275218475,4.60782754989601,121.342101224081,5.87094110079009,1.79970819298022,8.00542430560307,5.09288173976397,4.11750542536764,3.64397621127307,4.34560800480691,4.34716277461562,6.44142938134636,4.70499662896497,30.2462910635439,52.8729625092895,12.1306924048164,20.8337437327609,14.9638509407109,11.0353010128067,17.2859644613135,22.9071323110287,22.9963367131488,23.1885833715578,17.4285207681096,22.2484898835553,9.26942369611222,14.7502742530899,12.6684809398043,17.9740500590611,30.8632446640414,88.4560502966303,95.6886934296937,11.3449532086541,2.80885274925294,2.83082697826187,9.09323198065896,24.8550927042602,26.735970837845,16.9258337773354,21.7805156738393,17.5120166255189,17.7407179820485,16.2773761325285,14.4867636755794,18.3321587516456,23.2029388378007,28.7293062138417,42.9664690593035,32.8949971706998,23.2723122208514,36.6383523215815,3.78521907415429,8.54108282748061,298.36816103437,120.325007831913,20.6889603019177,29.2618206544153,40.5932503164594,43.7653248432653,36.025243102869,45.0834733886765,106.294509785971,54.1859561041996,56.0477515624601,58.6921592521395,63.363328313714,111.453606673123,118.011375231583,139.598032551311,23.5188197181821,24.3349331858722,24.7957018480777,23.2162513743658,20.9468686141036,27.4231055771146,25.4210879239514,23.0271830848179,19.4678422523305,21.7179008502369,50.3969466048153,77.9166643694159,102.407236453979,104.785744371342,154.173692255262,132.406260704077,96.5031978251581,75.6640841495632,123.384907575802,57.108773943121,40.2550978276593,50.6111688829165,38.0685961199764,35.6136217905428,34.0855085691633,60.7878836917843,94.0393737948018,19.3281240005894,20.5335870316953,23.0853316654256,25.8159273117352,42.0440706178958,50.2272082269489,72.1994497073856,59.1131790398216,62.010113101657,72.0735554331842,80.2930242107116,58.7128938344045,65.3813744788432,4.52373851817817,15.2293591469239,31.4729134732183,32.2845993176537,7.70642831941401,5.15731421005694,54.9182067011863,24.2372090116198,23.0321000173867,28.8924670779512,34.252320239515,25.3306925829705,29.409424978876,32.5538010407157,19.4309136803949,21.0424217696145,26.8795689003636,5.46246237917072,31.6526390014439,18.3407571777273,29.4825396429973,43.3871423417768,34.5137359683903,20.3935734370184,14.8138542912728,19.8035333743693,23.9194533233426,25.517117279346,51.9440869268124,33.4451031119305,34.2237483249332,36.6602639205547,32.6797686582496,38.1601510018291,7.48967132658334,16.0254373687866,14.1000965323202,10.2881776815164,13.4778577568128,16.2315624017884,12.5057255657612,11.8741330154694,35.2007562095566,20.5477108737906,16.5396298541221,153.344215235576,150.000452400496,123.520870252863,103.376449906716,120.151138613385,102.892735330337,7.6024373824309,115.337844538551,24.5600372876235,45.1874646782097,128.655656134204,124.255052998412,104.322846982174,17.5077782893671,11.47601909054,21.1445959920768,166.11268753463,25.9395514736531,38.2240598198476,49.466446096385,63.9810185804274,75.3350844924313,78.4910495959656,95.5473948184883,109.937495633292,156.834117683069,22.9895545842163,1.12738587736838,15.5497207885738,10.5893433892542,11.0837177356107,10.8494251721294,10.4752797804282,10.7968659554094,11.5881902511116,4.19437377702843,2.41584120826006,5.76060012515731,81.53086912207,20.8806971748869,26.3967159913606,34.5589389120935,47.2630476562151,57.4189115317856,45.9146617166281,59.8142585057038,57.449910020496,60.5844112907249,73.3006365944831,89.0765029961337,76.1035667375006,76.0868633202014,155.990503927265,7.32553646134413,6.19025610605382,8.05846158547577,43.8540378453072,54.8032828317451,70.513375342897,178.568859772862,32.6021867622986,2.82375921308533,2.30162618253588,2.29158205375759,4.1244763762485,0.685082519770642,1.5107877947794,1.35004500046361,2.70192721934532,1.35942722695261,3.62432218226274,15.9832515279632,27.9317411380722,20.1465654789878,44.4885292234978,45.0668299650162,39.158667299853,31.781282075631,28.2268028417285,35.9429514742833,32.8506375292937,34.7266640849628,33.9527414494937,30.7144144501214,33.4851547077466,33.3125719942557,34.2931457723813,27.6963539008205,31.8300213765113,36.263559270691,27.9677948255355,27.4295401908332,27.5087499546973,27.4201618439419,29.9413618262597,29.0797985483372,35.7073645302875,33.6587470085902,32.8837139297304,30.420121501473,16.8342681497322,30.4891996579128,32.3094702191848,37.6492559716114,33.3114208549827,46.6833998574362,44.7160934508923,47.0202532975271,64.4613162144895,29.4584031386019,48.3095207871739,32.461496986859
|short_description=p1@Klf3
}}

Revision as of 07:49, 14 September 2013

Short description:p1@Klf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Klf3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000165536, NM_008453, uc008xmr.1, uc008xms.1_5end
EntrezGene:Klf3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Klf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5204.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6268.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I3195.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I4273.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7119.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I890.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9131.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E762.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F278.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E486.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E889.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A166.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3106.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5121.72
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A249.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A451.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.53
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D162.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D252.99
GP2+ M cell, pool1.CNhs13228.11845-124H9179.73
GP2+ M cell, pool2.CNhs13231.11846-124I1124.49
GP2+ M cell, pool3.CNhs13240.11847-124I2116.57
Ileum epithelium, pool1.CNhs13199.10252-104B9118.95
Ileum epithelium, pool2.CNhs13232.10253-104C1118.45
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C868.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F551.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F639.40
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F755.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8118.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H182.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9115.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2168.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H470.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D846.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D942.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9184.97
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1277.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.43
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C820.37
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D917.34
Mouse Schwann, donor2.CNhs12573.11746-123F923.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F738.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C4195.15
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.37
Mouse hepatocyte, donor6.CNhs13090.11822-124F445.48
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G334.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B668.74
accessory axillary lymph node, adult.CNhs10475.1063-29H992.44
adrenal gland, adult.CNhs10508.49-24D728.06
adrenal gland, embryo E14.CNhs11038.406-44C521.69
adrenal gland, embryo E16.CNhs11004.1254-43D622.23
adrenal gland, embryo E17.CNhs11043.1263-45I124.68
adrenal gland, embryo E18.CNhs11026.1262-18F520.80
adrenal gland, neonate N00.CNhs11191.1311-23C129.75
adrenal gland, neonate N25.CNhs11223.1377-27I321.24
amnion, adult pregnant day17.5.CNhs10488.583-22A865.01
aorta, adult.CNhs10498.46-23H151.91
bone (os femoris), adult.CNhs10483.56-12G2105.27
bone (os femoris), neonate N02.CNhs11227.1985-43F533.49
bone (os femoris), neonate N16.CNhs11225.1525-43A659.41
bone (os femoris), neonate N20.CNhs11195.1350-25C365.46
cecum, adult.CNhs10467.37-13H4195.71
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H7121.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.01
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A252.87
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C614.96
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D422.91
eyeball, neonate N00.CNhs11207.633-15C623.00
eyeball, neonate N01.CNhs11140.1532-43E723.19
eyeball, neonate N02.CNhs11205.1551-44G817.43
eyeball, neonate N16.CNhs11188.777-19A222.25
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H214.75
forelimb, embryo E13.CNhs10589.384-1E212.67
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E730.86
forelimb, embryo E17.CNhs10598.1517-43C488.46
forelimb, embryo E18.CNhs11008.1520-43B595.69
gonad, embryo E13.CNhs11044.1564-45I611.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E924.86
heart, embryo E12.CNhs11015.353-12F526.74
heart, embryo E13.CNhs11013.376-3I916.93
heart, embryo E14.CNhs10597.403-26D421.78
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C617.74
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E318.33
heart, neonate N03.CNhs11221.1349-25I223.20
heart, neonate N10.CNhs11118.749-24G128.73
heart, neonate N16.CNhs11209.782-15G142.97
heart, neonate N20.CNhs11127.821-26I632.89
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D236.64
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I3298.37
intestine, adult.CNhs10496.178-9A3120.33
intestine, embryo E12.CNhs11019.1251-16I520.69
intestine, embryo E13.CNhs11010.381-16D529.26
intestine, embryo E15.CNhs10602.976-16D840.59
intestine, embryo E16.CNhs10585.463-22H443.77
intestine, embryo E17.CNhs10582.482-18D336.03
intestine, embryo E18.CNhs10526.1289-20F745.08
intestine, neonate N00.CNhs11126.644-26D1106.29
intestine, neonate N01.CNhs11192.1322-23E954.19
intestine, neonate N06.CNhs11102.688-20B856.05
intestine, neonate N07.CNhs11095.720-20F258.69
intestine, neonate N10.CNhs11098.755-23A563.36
intestine, neonate N20.CNhs11187.827-18D1111.45
intestine, neonate N25.CNhs11121.1352-25E3118.01
intestine, neonate N30.CNhs11131.1384-42G1139.60
kidney, embryo E14.CNhs10606.411-4I923.52
kidney, embryo E15.CNhs10997.434-16F824.33
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I223.22
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G727.42
kidney, neonate N10.CNhs11206.758-6D525.42
kidney, neonate N20.CNhs11113.832-19I123.03
kidney, neonate N25.CNhs11122.1353-25F319.47
kidney, neonate N30.CNhs11203.1385-42H121.72
liver, adult pregnant day01.CNhs10466.508-5B250.40
liver, embryo E12.CNhs10601.355-15F877.92
liver, embryo E13.CNhs10524.378-3H6102.41
liver, embryo E14.CNhs10594.409-16E1104.79
liver, embryo E15.CNhs10520.433-16D7154.17
liver, embryo E16.CNhs10523.462-17F5132.41
liver, embryo E17.CNhs10510.481-18A396.50
liver, embryo E18.CNhs10579.499-43G475.66
liver, neonate N00.CNhs11117.641-24F4123.38
liver, neonate N03.CNhs11123.1345-25G257.11
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H250.61
liver, neonate N10.CNhs11115.751-24B938.07
liver, neonate N20.CNhs11220.823-25A335.61
liver, neonate N25.CNhs11198.1368-26H134.09
liver, neonate N30.CNhs11106.1382-42D160.79
lung, adult.CNhs10474.28-22B194.04
lung, embryo E12.CNhs10522.354-16G219.33
lung, embryo E14.CNhs10604.404-26F820.53
lung, embryo E15.CNhs11020.432-17C523.09
lung, embryo E16.CNhs10998.458-17B625.82
lung, embryo E17.CNhs10605.480-44A642.04
lung, embryo E18.CNhs10583.1287-20I650.23
lung, neonate N00.CNhs11224.640-42C672.20
lung, neonate N06.CNhs11212.683-20E559.11
lung, neonate N07.CNhs11111.715-19A362.01
lung, neonate N10.CNhs11219.750-23E672.07
lung, neonate N20.CNhs11109.822-18A480.29
lung, neonate N25.CNhs11119.1359-25C758.71
lung, neonate N30.CNhs11133.1394-42H265.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H232.28
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C754.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.24
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E334.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.41
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.88
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I731.65
ovary, embryo E18.CNhs11040.505-44H718.34
ovary, neonate N00.CNhs11217.1299-22I429.48
oviduct, adult pregnant day01.CNhs10500.988-6G643.39
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E519.80
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I725.52
pancreas, neonate N00.CNhs11105.645-26G951.94
pancreas, neonate N01.CNhs11138.1531-43D733.45
pancreas, neonate N02.CNhs11139.1539-43D834.22
pancreas, neonate N16.CNhs11136.787-43B636.66
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E616.03
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B913.48
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F512.51
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I735.20
placenta, adult pregnant day17.CNhs10464.577-18G320.55
prostate, adult.CNhs10470.859-1F816.54
skin, adult.CNhs10492.30-1C3153.34
skin, neonate N00.CNhs11124.650-25G4150.00
skin, neonate N03.CNhs11215.662-22H3123.52
skin, neonate N06.CNhs11097.693-20I5103.38
skin, neonate N10.CNhs11108.762-6C4120.15
small intestine, neonate N16.CNhs11114.790-21I1102.89
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G2115.34
spleen, embryo E16.CNhs11035.461-43C124.56
spleen, embryo E18.CNhs11011.1271-21F245.19
spleen, neonate N10.CNhs11116.752-24D1128.66
spleen, neonate N20.CNhs11112.824-19H1124.26
spleen, neonate N25.CNhs11099.1354-25G3104.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.14
stomach, adult.CNhs10503.33-1H6166.11
stomach, embryo E12.CNhs10588.356-43E325.94
stomach, embryo E15.CNhs10603.1252-16G838.22
stomach, embryo E16.CNhs11022.459-17D449.47
stomach, embryo E17.CNhs11006.1035-18D563.98
stomach, embryo E18.CNhs10999.1286-20C675.34
stomach, neonate N03.CNhs11193.1340-24B878.49
stomach, neonate N07.CNhs11210.718-18A995.55
stomach, neonate N25.CNhs11104.1355-25E4109.94
stomach, neonate N30.CNhs11134.1386-42I1156.83
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F515.55
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G511.08
testis, embryo E17.CNhs11029.486-18I510.85
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B710.80
testis, neonate N07.CNhs11222.726-26I411.59
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B581.53
thymus, embryo E14.CNhs11041.402-44I420.88
thymus, embryo E15.CNhs11005.430-45I226.40
thymus, embryo E16.CNhs11002.456-26C534.56
thymus, embryo E17.CNhs10581.478-18C147.26
thymus, embryo E18.CNhs10595.1273-19G457.42
thymus, neonate N02.CNhs11181.1541-43F845.91
thymus, neonate N03.CNhs11137.2104-43C759.81
thymus, neonate N06.CNhs11197.681-26C457.45
thymus, neonate N07.CNhs11211.713-19D360.58
thymus, neonate N10.CNhs11194.748-24E473.30
thymus, neonate N20.CNhs11186.820-7A289.08
thymus, neonate N25.CNhs11125.1362-25G776.10
thymus, neonate N30.CNhs11132.1393-42G276.09
tongue, adult.CNhs10499.32-1B4155.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E443.85
uterus, adult pregnant day19.CNhs10497.590-15F554.80
uterus, adult.CNhs10509.92-27E570.51
vagina, adult.CNhs10502.89-27D5178.57
vesicular gland, adult.CNhs10491.51-27F832.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I815.98
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H220.15
whole body, embryo E14.5.CNhs10578.420-27D244.49
whole body, embryo E14.CNhs10519.395-14B145.07
whole body, embryo E16.CNhs10514.453-14F239.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.85
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G532.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.31
whole body, embryo E17.5.CNhs10513.490-9F946.68
whole body, embryo E17.CNhs10517.475-3I544.72
whole body, embryo E18.CNhs10516.493-3B347.02
whole body, neonate N00.CNhs10525.657-19C264.46
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D148.31
whole body, neonate N10.CNhs10518.761-6B432.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system1.82e-27116
digestive tract1.82e-27116
primitive gut1.82e-27116
endoderm-derived structure4.15e-27118
endoderm4.15e-27118
presumptive endoderm4.15e-27118
subdivision of digestive tract9.05e-27114
gastrointestinal system1.87e-1547
foregut2.78e-1480
endo-epithelium2.57e-1269
gut epithelium7.61e-1155
intestine7.78e-1131
unilaminar epithelium1.77e-1066
organ component layer1.94e-0824
mucosa2.40e-0715
intestinal mucosa5.34e-0713
wall of intestine5.34e-0713
gastrointestinal system mucosa5.34e-0713







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