FFCP PHASE1:Hg19::chr8:31497019..31497036,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3084|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7997|TSSclassifier=W|UniProt=Q02297|association_with_transcript=-231bp_to_NM_013962,uc003xip.2_5end|coexpression_cluster_id=C961|description=CAGE_peak_24_at_NRG1_5end|id=chr8:31497019..31497036,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.94e-17;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.04e-13;1!DOID:4549;1.04e-13;1!DOID:5861;1.04e-13;1!DOID:6496;1.04e-13;1|ontology_enrichment_disease_v019_2=DOID:3371,8.58e-14,1;DOID:4549,8.58e-14,1;DOID:5861,8.58e-14,1;DOID:6496,8.58e-14,1|ontology_enrichment_uberon=UBERON:0001049!7.12e-71!57;UBERON:0005068!7.12e-71!57;UBERON:0006241!7.12e-71!57;UBERON:0007135!7.12e-71!57;UBERON:0002616!1.30e-64!59;UBERON:0002780!3.81e-62!41;UBERON:0001890!3.81e-62!41;UBERON:0006240!3.81e-62!41;UBERON:0003080!1.71e-60!42;UBERON:0001017!1.21e-59!82;UBERON:0005743!4.12e-59!86;UBERON:0000955!4.57e-56!69;UBERON:0006238!4.57e-56!69;UBERON:0000073!3.21e-55!94;UBERON:0001016!3.21e-55!94;UBERON:0003075!6.34e-54!86;UBERON:0007284!6.34e-54!86;UBERON:0002346!1.42e-53!90;UBERON:0002020!2.61e-52!34;UBERON:0003528!2.61e-52!34;UBERON:0001869!1.29e-51!32;UBERON:0002619!2.73e-49!22;UBERON:0001893!2.97e-48!34;UBERON:0002791!1.14e-45!33;UBERON:0003056!1.31e-44!61;UBERON:0001950!1.12e-43!20;UBERON:0000956!6.14e-43!25;UBERON:0000203!6.14e-43!25;UBERON:0007023!1.49e-39!115;UBERON:0000033!4.69e-34!123;UBERON:0000153!9.66e-34!129;UBERON:0007811!9.66e-34!129;UBERON:0000924!1.15e-30!173;UBERON:0006601!1.15e-30!173;UBERON:0004121!3.38e-30!169;UBERON:0000025!6.51e-19!194;UBERON:0000200!1.19e-17!6;UBERON:0002021!5.97e-16!5;UBERON:0001894!2.63e-15!7;UBERON:0006222!2.63e-15!7;UBERON:0004111!5.81e-14!241;UBERON:0001871!2.51e-13!7;UBERON:0004733!4.91e-12!12;UBERON:0002028!4.91e-12!12;UBERON:0007277!4.91e-12!12;UBERON:0003076!5.47e-12!15;UBERON:0003057!5.47e-12!15;UBERON:0000369!1.63e-11!4;UBERON:0002435!1.63e-11!4;UBERON:0000204!1.63e-11!4;UBERON:0010082!1.63e-11!4;UBERON:0000477!1.70e-11!286;UBERON:0004732!5.09e-11!13;UBERON:0002308!5.93e-11!9;UBERON:0000125!5.93e-11!9;UBERON:0000064!9.83e-11!219;UBERON:0001872!4.90e-10!5;UBERON:0000988!5.05e-10!3;UBERON:0000349!5.13e-10!5;UBERON:0000483!7.89e-10!309;UBERON:0000119!1.25e-09!312;UBERON:0002298!1.56e-09!8;UBERON:0002771!1.92e-09!3;UBERON:0000481!2.89e-09!347;UBERON:0005383!5.26e-09!3;UBERON:0005382!5.26e-09!3;UBERON:0000475!7.38e-09!365;UBERON:0002680!1.05e-08!9;UBERON:0001895!1.05e-08!9;UBERON:0010092!1.05e-08!9;UBERON:0003296!6.76e-08!4;UBERON:0010133!6.76e-08!4;UBERON:0002420!9.78e-08!9;UBERON:0007245!9.78e-08!9;UBERON:0010009!9.78e-08!9;UBERON:0010011!9.78e-08!9;UBERON:0000454!9.78e-08!9;UBERON:0001905!1.15e-07!2;UBERON:0002757!1.15e-07!2;UBERON:0010134!1.15e-07!2;UBERON:0002784!1.15e-07!2;UBERON:0005408!1.15e-07!2;UBERON:0001899!1.15e-07!2;UBERON:0001954!2.50e-07!2;UBERON:0003022!2.50e-07!2;UBERON:0002421!2.50e-07!2;UBERON:0002600!2.50e-07!2;UBERON:0001870!2.82e-07!2;UBERON:0002148!6.01e-07!2;UBERON:0009662!6.01e-07!2;UBERON:0001897!7.62e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;1.46e-33;22!UBERON:0000956;1.29e-29;25!UBERON:0000203;1.29e-29;25!UBERON:0001950;2.73e-28;20!UBERON:0001905;4.92e-26;2!UBERON:0002757;4.92e-26;2!UBERON:0010134;4.92e-26;2!UBERON:0005408;4.92e-26;2!UBERON:0001899;4.92e-26;2!UBERON:0000073;1.36e-25;53!UBERON:0002616;1.36e-25;53!UBERON:0002780;1.92e-23;41!UBERON:0001890;1.92e-23;41!UBERON:0002021;8.22e-23;5!UBERON:0002791;1.32e-21;32!UBERON:0001869;1.60e-21;32!UBERON:0001893;3.18e-18;34!UBERON:0003528;1.31e-17;34!UBERON:0002020;1.31e-17;34!UBERON:0000955;4.39e-17;68!UBERON:0004733;6.55e-17;12!UBERON:0002028;6.55e-17;12!UBERON:0004732;1.24e-15;13!UBERON:0002022;1.04e-13;1!UBERON:0003296;1.56e-13;4!UBERON:0010133;1.56e-13;4!UBERON:0002784;1.56e-13;4!UBERON:0002680;3.89e-13;9!UBERON:0001895;3.89e-13;9!UBERON:0001016;2.54e-11;83!UBERON:0001017;9.20e-11;75!UBERON:0002298;2.30e-09;6!UBERON:0002037;3.41e-09;6!UBERON:0001871;4.04e-08;6!UBERON:0001894;4.04e-08;7!UBERON:0001954;1.70e-07;2!UBERON:0003022;1.70e-07;2!UBERON:0002421;1.70e-07;2!UBERON:0002600;1.70e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.98e-43,53;UBERON:0002616,2.98e-43,53;UBERON:0001049,6.70e-41,56;UBERON:0005068,6.70e-41,56;UBERON:0006241,6.70e-41,56;UBERON:0007135,6.70e-41,56;UBERON:0002619,2.12e-33,22;UBERON:0000955,4.97e-33,68;UBERON:0006238,4.97e-33,68;UBERON:0000956,1.79e-29,25;UBERON:0000203,1.79e-29,25;UBERON:0002780,3.35e-28,41;UBERON:0001890,3.35e-28,41;UBERON:0003080,3.35e-28,41;UBERON:0006240,3.35e-28,41;UBERON:0001950,4.49e-28,20;UBERON:0001017,1.28e-27,81;UBERON:0003075,1.28e-27,82;UBERON:0007284,1.28e-27,82;UBERON:0002346,2.81e-26,86;UBERON:0001905,4.63e-26,2;UBERON:0002757,4.63e-26,2;UBERON:0010134,4.63e-26,2;UBERON:0005408,4.63e-26,2;UBERON:0001899,4.63e-26,2;UBERON:0001016,9.17e-25,89;U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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |||
|TSSclassifier=W | |||
|UniProt=Q02297 | |||
|association_with_transcript=-231bp_to_NM_013962,uc003xip.2_5end | |||
|coexpression_cluster_id=C961 | |||
|description=CAGE_peak_24_at_NRG1_5end | |||
|id=chr8:31497019..31497036,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.94e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.04e-13;1!DOID:4549;1.04e-13;1!DOID:5861;1.04e-13;1!DOID:6496;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.58e-14,1;DOID:4549,8.58e-14,1;DOID:5861,8.58e-14,1;DOID:6496,8.58e-14,1 | |||
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|short_description=p24@NRG1 | |||
}} |
Revision as of 05:05, 14 September 2013
Short description: | p24@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_NRG1_5end |
Coexpression cluster: | C961_pineal_parietal_gastrointestinal_pons_pituitary_cerebellum_occipital |
Association with transcript: | -231bp_to_NM_013962, uc003xip.2_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | Q02297 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.58e-14 | 1 |
extraosseous chondrosarcoma | 8.58e-14 | 1 |
myxoid chondrosarcoma | 8.58e-14 | 1 |
extraskeletal myxoid chondrosarcoma | 8.58e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.