FFCP PHASE1:Hg19::chr7:116165557..116165572,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1527|TSSclassifier=W|UniProt=|association_with_transcript=-221bp_to_ENST00000405348_5end|description=CAGE_peak_4_at_CAV1_5end|id=chr7:116165557..116165572,+|ontology_enrichment_celltype=CL:0000055!1.90e-13!180;CL:0000057!2.59e-12!75;CL:0000136!2.43e-08!15;CL:0000220!7.76e-07!246|ontology_enrichment_celltype_v019=CL:0000136;8.01e-08;13!CL:0002620;6.06e-07;23!CL:0000349;6.42e-07;19|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-13,76;CL:0000136,1.07e-08,15;CL:0000680,5.37e-07,58;CL:0000056,5.37e-07,58;CL:0000355,5.37e-07,58;CL:0002620,6.85e-07,23;CL:0000349,7.17e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!3.18e-14!216;UBERON:0003102!5.67e-12!95;UBERON:0003104!9.83e-12!238;UBERON:0009142!9.83e-12!238;UBERON:0004923!2.26e-10!57;UBERON:0000914!8.88e-10!83;UBERON:0002329!8.88e-10!83;UBERON:0003077!8.88e-10!83;UBERON:0003059!8.88e-10!83;UBERON:0007282!8.88e-10!83;UBERON:0009618!8.88e-10!83;UBERON:0007285!8.88e-10!83;UBERON:0004872!1.79e-08!84;UBERON:0000475!1.97e-08!365;UBERON:0005256!2.03e-08!143;UBERON:0000486!2.18e-08!82;UBERON:0000468!4.70e-08!659;UBERON:0000478!5.90e-08!24;UBERON:0005631!9.98e-08!14;UBERON:0000158!9.98e-08!14;UBERON:0000055!1.36e-07!69;UBERON:0004290!2.06e-07!70;UBERON:0002199!2.92e-07!45;UBERON:0002416!2.92e-07!45;UBERON:0004119!3.06e-07!169;UBERON:0000925!3.06e-07!169;UBERON:0006595!3.06e-07!169;UBERON:0000481!5.43e-07!347;UBERON:0002049!6.09e-07!79;UBERON:0007798!6.09e-07!79|ontology_enrichment_uberon_v019=UBERON:0000478;4.89e-08;24!UBERON:0005631;9.98e-07;10!UBERON:0000158;9.98e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.07e-13,99;UBERON:0004923,8.96e-12,66;UBERON:0002100,2.78e-11,199;UBERON:0000486,6.09e-09,83;UBERON:0002199,3.95e-08,46;UBERON:0002416,3.95e-08,46;UBERON:0000478,4.55e-08,24;UBERON:0005631,4.70e-08,14;UBERON:0000158,4.70e-08,14;UBERON:0002329,6.05e-08,71;UBERON:0003059,6.05e-08,71;UBERON:0007282,6.05e-08,71;UBERON:0004290,6.05e-08,71;UBERON:0009618,6.05e-08,71;UBERON:0007524,1.14e-07,73;UBERON:0003077,1.45e-07,72;UBERON:0007285,1.45e-07,72;UBERON:0004872,1.84e-07,83;UBERON:0007503,3.12e-07,78;UBERON:0002097,5.37e-07,41;UBERON:0000055,5.47e-07,68;UBERON:0003104,7.35e-07,160;UBERON:0009142,7.35e-07,160|phase1_expression=14.1709135831034,8.34992043174834,13.8135316014052,17.0124607200322,5.36353313312745,12.2127393374052,7.59899634504932,6.31719873426831,4.44015567939725,8.60068777755281,4.18680700783456,7.64544802455603,6.06664049925443,4.70312141248177,8.94772914465373,6.05092631806598,7.8350288643117,5.11217063271161,6.34312638427659,2.95490539384291,3.87601313364081,0.626909442956176,0,2.05311637609326,2.00868223351684,0.534893840235659,1.23150884174919,1.02324015707783,0,0,0.77408061658038,2.75826367343678,1.8072355126695,2.21852406100073,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,2.68511379871414,7.95166135246046,3.50936537445123,6.66293987219789,4.7717156823066,4.37971383272372,2.9305793320861,2.66075276955077,1.75669571386252,7.20384915237419,2.91436230634034,0.370784442784429,0,0,0,0,0,0,2.78267370313387,2.58070378531837,1.04142150482278,1.69592382577203,2.09749718104953,3.30141650328081,1.46296476575767,1.03366703667732,4.62496141492723,4.68608857870538,4.43112248820062,0.760272105718513,3.1728067481262,1.47065232138347,2.43042584364528,2.05389375053383,0.673588117878509,2.13961812918312,3.06633274931766,1.89853131913626,1.28241220751285,0,0,1.3082821564276,11.9273268406876,4.43206790826029,5.82600395578163,2.58152958673932,4.25602058638028,3.36406560085384,0,3.45334567784024,4.35695449559673,2.42479209725439,1.79808093424805,1.96764655938411,0.576175924479999,3.04617861383936,6.24320153660641,5.13424639390004,6.57574194427925,3.52303495931295,3.88495066483516,3.37081936085396,6.73708765141148,5.28187564440602,5.3729406211398,5.94001428641027,4.20353779773547,5.46096817162816,2.15585442544872,6.06010010234638,3.62843707628696,11.9137569658199,5.70670907145089,6.12975591598039,8.11285518095623,2.38207584636044,4.12596162084383,11.5320989962026,5.51022943014861,7.50227740211006,8.24420233907511,4.63752972082133,10.9808945235638,4.05063197379039,5.06672426838233,3.5340728394176,8.28449087780694,5.98090410229604,4.61512470271599,10.075209822764,7.46066606166146,4.83152132908242,5.45492241181669,4.30206893083506,0.243947412259191,0.132529768321485,0.232387885739037,0.725627385107593,0.504641701751257,1.09493207722749,15.6449532329816,9.64861407289328,5.52539685409922,18.5747171212792,13.7157101517221,4.850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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1527 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-221bp_to_ENST00000405348_5end | |||
|description=CAGE_peak_4_at_CAV1_5end | |||
|id=chr7:116165557..116165572,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-13!180;CL:0000057!2.59e-12!75;CL:0000136!2.43e-08!15;CL:0000220!7.76e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.01e-08;13!CL:0002620;6.06e-07;23!CL:0000349;6.42e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-13,76;CL:0000136,1.07e-08,15;CL:0000680,5.37e-07,58;CL:0000056,5.37e-07,58;CL:0000355,5.37e-07,58;CL:0002620,6.85e-07,23;CL:0000349,7.17e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.18e-14!216;UBERON:0003102!5.67e-12!95;UBERON:0003104!9.83e-12!238;UBERON:0009142!9.83e-12!238;UBERON:0004923!2.26e-10!57;UBERON:0000914!8.88e-10!83;UBERON:0002329!8.88e-10!83;UBERON:0003077!8.88e-10!83;UBERON:0003059!8.88e-10!83;UBERON:0007282!8.88e-10!83;UBERON:0009618!8.88e-10!83;UBERON:0007285!8.88e-10!83;UBERON:0004872!1.79e-08!84;UBERON:0000475!1.97e-08!365;UBERON:0005256!2.03e-08!143;UBERON:0000486!2.18e-08!82;UBERON:0000468!4.70e-08!659;UBERON:0000478!5.90e-08!24;UBERON:0005631!9.98e-08!14;UBERON:0000158!9.98e-08!14;UBERON:0000055!1.36e-07!69;UBERON:0004290!2.06e-07!70;UBERON:0002199!2.92e-07!45;UBERON:0002416!2.92e-07!45;UBERON:0004119!3.06e-07!169;UBERON:0000925!3.06e-07!169;UBERON:0006595!3.06e-07!169;UBERON:0000481!5.43e-07!347;UBERON:0002049!6.09e-07!79;UBERON:0007798!6.09e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.89e-08;24!UBERON:0005631;9.98e-07;10!UBERON:0000158;9.98e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.07e-13,99;UBERON:0004923,8.96e-12,66;UBERON:0002100,2.78e-11,199;UBERON:0000486,6.09e-09,83;UBERON:0002199,3.95e-08,46;UBERON:0002416,3.95e-08,46;UBERON:0000478,4.55e-08,24;UBERON:0005631,4.70e-08,14;UBERON:0000158,4.70e-08,14;UBERON:0002329,6.05e-08,71;UBERON:0003059,6.05e-08,71;UBERON:0007282,6.05e-08,71;UBERON:0004290,6.05e-08,71;UBERON:0009618,6.05e-08,71;UBERON:0007524,1.14e-07,73;UBERON:0003077,1.45e-07,72;UBERON:0007285,1.45e-07,72;UBERON:0004872,1.84e-07,83;UBERON:0007503,3.12e-07,78;UBERON:0002097,5.37e-07,41;UBERON:0000055,5.47e-07,68;UBERON:0003104,7.35e-07,160;UBERON:0009142,7.35e-07,160 | |||
|phase1_expression=14.1709135831034,8.34992043174834,13.8135316014052,17.0124607200322,5.36353313312745,12.2127393374052,7.59899634504932,6.31719873426831,4.44015567939725,8.60068777755281,4.18680700783456,7.64544802455603,6.06664049925443,4.70312141248177,8.94772914465373,6.05092631806598,7.8350288643117,5.11217063271161,6.34312638427659,2.95490539384291,3.87601313364081,0.626909442956176,0,2.05311637609326,2.00868223351684,0.534893840235659,1.23150884174919,1.02324015707783,0,0,0.77408061658038,2.75826367343678,1.8072355126695,2.21852406100073,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,2.68511379871414,7.95166135246046,3.50936537445123,6.66293987219789,4.7717156823066,4.37971383272372,2.9305793320861,2.66075276955077,1.75669571386252,7.20384915237419,2.91436230634034,0.370784442784429,0,0,0,0,0,0,2.78267370313387,2.58070378531837,1.04142150482278,1.69592382577203,2.09749718104953,3.30141650328081,1.46296476575767,1.03366703667732,4.62496141492723,4.68608857870538,4.43112248820062,0.760272105718513,3.1728067481262,1.47065232138347,2.43042584364528,2.05389375053383,0.673588117878509,2.13961812918312,3.06633274931766,1.89853131913626,1.28241220751285,0,0,1.3082821564276,11.9273268406876,4.43206790826029,5.82600395578163,2.58152958673932,4.25602058638028,3.36406560085384,0,3.45334567784024,4.35695449559673,2.42479209725439,1.79808093424805,1.96764655938411,0.576175924479999,3.04617861383936,6.24320153660641,5.13424639390004,6.57574194427925,3.52303495931295,3.88495066483516,3.37081936085396,6.73708765141148,5.28187564440602,5.3729406211398,5.94001428641027,4.20353779773547,5.46096817162816,2.15585442544872,6.06010010234638,3.62843707628696,11.9137569658199,5.70670907145089,6.12975591598039,8.11285518095623,2.38207584636044,4.12596162084383,11.5320989962026,5.51022943014861,7.50227740211006,8.24420233907511,4.63752972082133,10.9808945235638,4.05063197379039,5.06672426838233,3.5340728394176,8.28449087780694,5.98090410229604,4.61512470271599,10.075209822764,7.46066606166146,4.83152132908242,5.45492241181669,4.30206893083506,0.243947412259191,0.132529768321485,0.232387885739037,0.725627385107593,0.504641701751257,1.09493207722749,15.6449532329816,9.64861407289328,5.52539685409922,18.5747171212792,13.7157101517221,4.8505788016336,6.74338760312407,5.06123162755312,3.86028904563379,5.01122721412534,3.32178866755535,3.91010793664477,3.13954344200554,1.92373578473195,0.738155454624648,1.40241773803446,3.2925920906512,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,2.74508496477641,2.63400684980701,2.24803506515239,1.80952150340936,3.42577247086559,1.3032332212413,4.15973914111831,2.88662684050547,4.17349457910277,6.22266079449855,5.91902435820403,5.55582615091933,8.37118269832232,5.53143078571493,6.86788929675898,0,0,0,3.74935335947108,7.72717789714754,3.96970272278682,5.10483579406235,2.3250715081117,1.91691339582606,0,0,0,0,0.12624243342638,0,0.381988425558278,1.17217447210047,3.4214489204541,0.411309970813294,0,0,5.27016096423195,3.48768055066624,4.8403268641827,4.00742318849111,3.57656445851882,5.071816515336,7.71220538096124,5.2003718455683,3.08648849114571,2.83698264046557,1.8649552531127,1.42977993658148,0,1.64648067356154,5.21177894869976,1.06617584622764,0.791951872933429,0.904318131178758,0,0.799783929456456,0,0,0,5.75099653179798,8.04033550838797,9.98458335285029,16.9394128801068,10.2738161275192,8.2368043090352,0,0,0,0,0.508189248444927,0,0,0.335032530668698,1.27587750330633,0,0,0,3.6807447515742,2.50085260529839,4.34024037919577,11.6463682457252,9.63516539504674,16.5587535785631,11.2455758393005,7.22270639346525,0,6.2083842775503,5.31380478828349,7.00602840458472,9.20966313361678,1.37060810223918,1.71571711905428,0.206768026122887,0.215714200818617,0,20.6126748583456,16.6435439510497,8.46692821323105,17.1194387394956,7.51963669111506,5.89386198309454,10.5074102389675,12.2809739776009,6.11244900345709,7.42090332224955,6.47680713971153,3.37367278094941,6.24166385704949,7.78881643775432,7.08883308605751,0.120859449591622,8.22076528243468,5.34069735828199,3.67406234126742,6.19109971222838,3.2781103739856,0.902399225814824,3.54270550680308,1.56869953835371,5.84556898613043,4.01096189792928,0,1.70093705276516,3.88648648983851,0,1.62567862526312,2.00675909541941,3.82314409567557,0.831076008928724,1.11937377361089,0,0,1.02580050046556,0,0,8.24328093181778,0.366277859273374,0.165018999841176,2.87132768998086,2.60024098414608,14.4615536859744,2.03008508413456,2.00263202249038,1.99554777143968,2.48105830472155,1.93356440762893,2.32026710262766,1.87498580315422,1.15741646340759,5.12383237619032,4.61256161676255,1.40373983744043,4.75441570021085,6.507837690162,5.35180989612088,3.485186350803,4.92853728281742,3.1938361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| |||
|short_description=p4@CAV1 | |||
}} |
Revision as of 22:51, 13 September 2013
Short description: | p4@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | -221bp_to_ENST00000405348_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.29e-13 | 76 |
fat cell | 1.07e-08 | 15 |
muscle precursor cell | 5.37e-07 | 58 |
myoblast | 5.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.37e-07 | 58 |
skin fibroblast | 6.85e-07 | 23 |
extraembryonic cell | 7.17e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.07e-13 | 99 |
organ component layer | 8.96e-12 | 66 |
trunk | 2.78e-11 | 199 |
multilaminar epithelium | 6.09e-09 | 83 |
integument | 3.95e-08 | 46 |
integumental system | 3.95e-08 | 46 |
extraembryonic structure | 4.55e-08 | 24 |
extraembryonic membrane | 4.70e-08 | 14 |
membranous layer | 4.70e-08 | 14 |
somite | 6.05e-08 | 71 |
presomitic mesoderm | 6.05e-08 | 71 |
presumptive segmental plate | 6.05e-08 | 71 |
dermomyotome | 6.05e-08 | 71 |
trunk paraxial mesoderm | 6.05e-08 | 71 |
dense mesenchyme tissue | 1.14e-07 | 73 |
paraxial mesoderm | 1.45e-07 | 72 |
presumptive paraxial mesoderm | 1.45e-07 | 72 |
splanchnic layer of lateral plate mesoderm | 1.84e-07 | 83 |
epithelial vesicle | 3.12e-07 | 78 |
skin of body | 5.37e-07 | 41 |
vessel | 5.47e-07 | 68 |
mesenchyme | 7.35e-07 | 160 |
entire embryonic mesenchyme | 7.35e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.