FFCP PHASE1:Hg19::chr6:101846877..101846931,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2898|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4580|TSSclassifier=S|UniProt=Q6P3V6|association_with_transcript=0bp_to_uc003pqn.2,uc003pqo.3,uc003pqp.3,uc010kcw.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GRIK2_5end|id=chr6:101846877..101846931,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.26e-19;82!UBERON:0006215;9.82e-10;3!UBERON:0006241;2.21e-08;3!UBERON:0003057;2.21e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.33e-59!57;UBERON:0005068!1.33e-59!57;UBERON:0006241!1.33e-59!57;UBERON:0007135!1.33e-59!57;UBERON:0001017!2.42e-59!82;UBERON:0005743!3.49e-57!86;UBERON:0000073!6.29e-57!94;UBERON:0001016!6.29e-57!94;UBERON:0002616!5.12e-52!59;UBERON:0000955!1.02e-51!69;UBERON:0006238!1.02e-51!69;UBERON:0002780!2.16e-50!41;UBERON:0001890!2.16e-50!41;UBERON:0006240!2.16e-50!41;UBERON:0003080!7.70e-49!42;UBERON:0003075!1.77e-48!86;UBERON:0007284!1.77e-48!86;UBERON:0002346!6.74e-47!90;UBERON:0001893!2.81e-45!34;UBERON:0002020!3.56e-45!34;UBERON:0003528!3.56e-45!34;UBERON:0002791!6.77e-44!33;UBERON:0001869!2.12e-43!32;UBERON:0003056!4.72e-39!61;UBERON:0000956!1.25e-34!25;UBERON:0000203!1.25e-34!25;UBERON:0000033!1.79e-32!123;UBERON:0002619!6.78e-32!22;UBERON:0000153!5.33e-31!129;UBERON:0007811!5.33e-31!129;UBERON:0004121!9.69e-31!169;UBERON:0000924!2.18e-30!173;UBERON:0006601!2.18e-30!173;UBERON:0001950!2.71e-29!20;UBERON:0007023!9.83e-27!115;UBERON:0000025!1.27e-23!194;UBERON:0004111!1.80e-18!241;UBERON:0000477!7.67e-17!286;UBERON:0000475!1.12e-14!365;UBERON:0000483!1.14e-13!309;UBERON:0000119!2.74e-13!312;UBERON:0002420!2.86e-12!9;UBERON:0007245!2.86e-12!9;UBERON:0010009!2.86e-12!9;UBERON:0010011!2.86e-12!9;UBERON:0000454!2.86e-12!9;UBERON:0001871!5.48e-12!7;UBERON:0003076!7.50e-12!15;UBERON:0003057!7.50e-12!15;UBERON:0002308!7.90e-12!9;UBERON:0000125!7.90e-12!9;UBERON:0000064!1.18e-10!219;UBERON:0000468!8.13e-10!659;UBERON:0009663!1.55e-09!7;UBERON:0000200!1.78e-09!6;UBERON:0000481!6.13e-09!347;UBERON:0004733!1.08e-08!12;UBERON:0002028!1.08e-08!12;UBERON:0007277!1.08e-08!12;UBERON:0000922!1.39e-08!612;UBERON:0000349!2.66e-08!5;UBERON:0002021!2.86e-08!5;UBERON:0000467!2.96e-08!625;UBERON:0000480!3.49e-08!626;UBERON:0001872!3.91e-08!5;UBERON:0000923!6.10e-08!604;UBERON:0005291!6.10e-08!604;UBERON:0006598!6.10e-08!604;UBERON:0002532!6.10e-08!604;UBERON:0002050!7.18e-08!605;UBERON:0005423!7.18e-08!605;UBERON:0002298!7.69e-08!8;UBERON:0004732!7.76e-08!13;UBERON:0003688!8.76e-08!6;UBERON:0002358!8.76e-08!6;UBERON:0003684!8.76e-08!6;UBERON:0001178!8.76e-08!6;UBERON:0000062!3.12e-07!511;UBERON:0001894!9.75e-07!7;UBERON:0006222!9.75e-07!7|ontology_enrichment_uberon_v019=UBERON:0001869;3.53e-68;32!UBERON:0001893;2.59e-65;34!UBERON:0003528;2.91e-65;34!UBERON:0002020;2.91e-65;34!UBERON:0002791;5.50e-64;32!UBERON:0002619;5.31e-62;22!UBERON:0000956;1.30e-58;25!UBERON:0000203;1.30e-58;25!UBERON:0002780;2.73e-57;41!UBERON:0001890;2.73e-57;41!UBERON:0001950;9.00e-57;20!UBERON:0000073;5.22e-54;53!UBERON:0002616;5.22e-54;53!UBERON:0001017;1.23e-44;75!UBERON:0000955;2.60e-40;68!UBERON:0001016;2.54e-35;83!UBERON:0001871;8.15e-20;6!UBERON:0002420;9.03e-19;9!UBERON:0007245;9.03e-19;9!UBERON:0010009;9.03e-19;9!UBERON:0010011;9.03e-19;9!UBERON:0000454;9.03e-19;9!UBERON:0000125;4.89e-18;9!UBERON:0002308;4.89e-18;9!UBERON:0000200;2.86e-17;6!UBERON:0004733;6.32e-17;12!UBERON:0002028;6.32e-17;12!UBERON:0004732;1.75e-15;13!UBERON:0002298;3.39e-15;6!UBERON:0000349;5.56e-15;5!UBERON:0002021;8.61e-15;5!UBERON:0001872;1.17e-14;5!UBERON:0011216;1.37e-13;132!UBERON:0009663;1.70e-13;7!UBERON:0007023;4.65e-13;114!UBERON:0000369;9.02e-12;4!UBERON:0002435;9.02e-12;4!UBERON:0000204;9.02e-12;4!UBERON:0002680;7.58e-11;9!UBERON:0001895;7.58e-11;9!UBERON:0001870;1.71e-09;3!UBERON:0005383;4.65e-09;3!UBERON:0005382;4.65e-09;3!UBERON:0000988;1.20e-08;3!UBERON:0002240;2.21e-08;3!UBERON:0005174;2.21e-08;3!UBERON:0001137;2.21e-08;3!UBERON:0001896;3.10e-08;3!UBERON:0005290;3.10e-08;3!UBERON:0010314;3.69e-08;132!UBERON:0001876;3.73e-07;2!UBERON:0002771;4.99e-07;2!UBERON:0003688;7.81e-07;6!UBERON:0002358;7.81e-07;6!UBERON:0003684;7.81e-07;6!UBERON:0001178;7.81e-07;6!UBERON:0001954;8.84e-07;2!UBERON:0003022;8.84e-07;2!UBERON:0002421;8.84e-07;2!UBERON:0002600;8.84e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.50e-102,56;UBERON:0005068,2.50e-102,56;UBERON:0006241,2.50e-102,56;UBERON:0007135,2.50e-102,56;UBERON:0001017,5.32e-100,81;UBERON:0001016,5.12e-96,89;UBERON:0000073,3.30e-95,53;UBERON:0002616,3.30e-95,53;UBERON:0000955,9.03e-93,68;UBERON:0006238,9.03e-93,68;UBERON:0002780,6.74e-79,41;UBERON:0001890,6.74e-79,41;UBERON:0003080,6.74e-79,41;UBERON:0006240,6.74e-79,41;UBERON:0001869,3.30e-76,32;UBERON:0001893,6.22e-76,34;UBERON:0003528,9.61e-76,34;UBERON:000202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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4580 | |||
|TSSclassifier=S | |||
|UniProt=Q6P3V6 | |||
|association_with_transcript=0bp_to_uc003pqn.2,uc003pqo.3,uc003pqp.3,uc010kcw.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIK2_5end | |||
|id=chr6:101846877..101846931,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.26e-19;82!UBERON:0006215;9.82e-10;3!UBERON:0006241;2.21e-08;3!UBERON:0003057;2.21e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.53e-68;32!UBERON:0001893;2.59e-65;34!UBERON:0003528;2.91e-65;34!UBERON:0002020;2.91e-65;34!UBERON:0002791;5.50e-64;32!UBERON:0002619;5.31e-62;22!UBERON:0000956;1.30e-58;25!UBERON:0000203;1.30e-58;25!UBERON:0002780;2.73e-57;41!UBERON:0001890;2.73e-57;41!UBERON:0001950;9.00e-57;20!UBERON:0000073;5.22e-54;53!UBERON:0002616;5.22e-54;53!UBERON:0001017;1.23e-44;75!UBERON:0000955;2.60e-40;68!UBERON:0001016;2.54e-35;83!UBERON:0001871;8.15e-20;6!UBERON:0002420;9.03e-19;9!UBERON:0007245;9.03e-19;9!UBERON:0010009;9.03e-19;9!UBERON:0010011;9.03e-19;9!UBERON:0000454;9.03e-19;9!UBERON:0000125;4.89e-18;9!UBERON:0002308;4.89e-18;9!UBERON:0000200;2.86e-17;6!UBERON:0004733;6.32e-17;12!UBERON:0002028;6.32e-17;12!UBERON:0004732;1.75e-15;13!UBERON:0002298;3.39e-15;6!UBERON:0000349;5.56e-15;5!UBERON:0002021;8.61e-15;5!UBERON:0001872;1.17e-14;5!UBERON:0011216;1.37e-13;132!UBERON:0009663;1.70e-13;7!UBERON:0007023;4.65e-13;114!UBERON:0000369;9.02e-12;4!UBERON:0002435;9.02e-12;4!UBERON:0000204;9.02e-12;4!UBERON:0002680;7.58e-11;9!UBERON:0001895;7.58e-11;9!UBERON:0001870;1.71e-09;3!UBERON:0005383;4.65e-09;3!UBERON:0005382;4.65e-09;3!UBERON:0000988;1.20e-08;3!UBERON:0002240;2.21e-08;3!UBERON:0005174;2.21e-08;3!UBERON:0001137;2.21e-08;3!UBERON:0001896;3.10e-08;3!UBERON:0005290;3.10e-08;3!UBERON:0010314;3.69e-08;132!UBERON:0001876;3.73e-07;2!UBERON:0002771;4.99e-07;2!UBERON:0003688;7.81e-07;6!UBERON:0002358;7.81e-07;6!UBERON:0003684;7.81e-07;6!UBERON:0001178;7.81e-07;6!UBERON:0001954;8.84e-07;2!UBERON:0003022;8.84e-07;2!UBERON:0002421;8.84e-07;2!UBERON:0002600;8.84e-07;2 | |||
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|short_description=p2@GRIK2 | |||
}} |
Revision as of 17:07, 13 September 2013
Short description: | p2@GRIK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GRIK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_uc003pqn.2, uc003pqo.3, uc003pqp.3, uc010kcw.2_5end |
EntrezGene: | GRIK2 |
HGNC: | 4580 |
UniProt: | Q6P3V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.