FFCP PHASE1:Hg19::chr5:75379067..75379080,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22987|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30670|TSSclassifier=S|UniProt=|association_with_transcript=70bp_to_ENST00000502798_5end|coexpression_cluster_id=C35|description=CAGE_peak_5_at_SV2C_5end|id=chr5:75379067..75379080,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002253;4.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0002253,4.17e-07,2|ontology_enrichment_development_v019=UBERON:0006241;3.81e-35;3!UBERON:0003057;3.81e-35;3!UBERON:0010122;3.88e-25;2!UBERON:0006222;3.13e-13;1!UBERON:0005425;6.42e-13;1!UBERON:0006601;2.27e-11;82|ontology_enrichment_disease=DOID:3095!1.68e-07!22;DOID:2994!1.68e-07!22;DOID:169!3.08e-07!6|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.72e-52!57;UBERON:0005068!7.72e-52!57;UBERON:0006241!7.72e-52!57;UBERON:0007135!7.72e-52!57;UBERON:0000073!2.12e-47!94;UBERON:0001016!2.12e-47!94;UBERON:0001017!2.01e-41!82;UBERON:0005743!4.47e-41!86;UBERON:0002616!1.27e-40!59;UBERON:0000955!6.41e-40!69;UBERON:0006238!6.41e-40!69;UBERON:0002780!7.13e-40!41;UBERON:0001890!7.13e-40!41;UBERON:0006240!7.13e-40!41;UBERON:0003080!9.29e-39!42;UBERON:0002020!1.09e-38!34;UBERON:0003528!1.09e-38!34;UBERON:0001893!3.01e-38!34;UBERON:0001869!1.11e-37!32;UBERON:0007023!2.47e-37!115;UBERON:0002791!5.39e-36!33;UBERON:0003075!5.04e-35!86;UBERON:0007284!5.04e-35!86;UBERON:0002346!6.59e-35!90;UBERON:0003056!2.35e-26!61;UBERON:0002619!2.16e-25!22;UBERON:0000924!3.73e-25!173;UBERON:0006601!3.73e-25!173;UBERON:0004121!8.53e-25!169;UBERON:0001950!9.66e-25!20;UBERON:0000033!1.87e-23!123;UBERON:0000153!3.10e-23!129;UBERON:0007811!3.10e-23!129;UBERON:0000956!5.82e-22!25;UBERON:0000203!5.82e-22!25;UBERON:0002308!5.69e-20!9;UBERON:0000125!5.69e-20!9;UBERON:0002420!2.67e-15!9;UBERON:0007245!2.67e-15!9;UBERON:0010009!2.67e-15!9;UBERON:0010011!2.67e-15!9;UBERON:0000454!2.67e-15!9;UBERON:0009663!6.48e-15!7;UBERON:0003076!9.48e-14!15;UBERON:0003057!9.48e-14!15;UBERON:0000369!1.94e-12!4;UBERON:0002435!1.94e-12!4;UBERON:0000204!1.94e-12!4;UBERON:0010082!1.94e-12!4;UBERON:0000025!1.84e-11!194;UBERON:0000200!1.39e-10!6;UBERON:0005383!8.55e-10!3;UBERON:0005382!8.55e-10!3;UBERON:0004732!1.08e-09!13;UBERON:0002240!1.81e-09!3;UBERON:0001872!2.31e-09!5;UBERON:0000988!3.67e-09!3;UBERON:0002298!9.46e-09!8;UBERON:0000013!1.07e-08!5;UBERON:0002410!1.07e-08!5;UBERON:0002021!1.48e-08!5;UBERON:0004111!1.57e-08!241;UBERON:0002771!7.53e-08!3;UBERON:0004733!7.88e-08!12;UBERON:0002028!7.88e-08!12;UBERON:0007277!7.88e-08!12;UBERON:0001871!8.16e-08!7;UBERON:0000010!2.86e-07!8;UBERON:0000922!2.89e-07!612;UBERON:0001873!4.50e-07!2;UBERON:0010122!4.50e-07!2;UBERON:0002148!8.10e-07!2;UBERON:0009662!8.10e-07!2;UBERON:0001875!8.33e-07!2;UBERON:0006514!8.33e-07!2|ontology_enrichment_uberon_v019=UBERON:0000369;4.00e-48;4!UBERON:0002435;4.00e-48;4!UBERON:0000204;4.00e-48;4!UBERON:0000125;1.83e-47;9!UBERON:0002308;1.83e-47;9!UBERON:0009663;1.03e-42;7!UBERON:0005383;1.01e-36;3!UBERON:0005382;1.01e-36;3!UBERON:0002240;3.81e-35;3!UBERON:0005174;3.81e-35;3!UBERON:0001137;3.81e-35;3!UBERON:0002420;2.98e-33;9!UBERON:0007245;2.98e-33;9!UBERON:0010009;2.98e-33;9!UBERON:0010011;2.98e-33;9!UBERON:0000454;2.98e-33;9!UBERON:0001873;3.88e-25;2!UBERON:0001869;4.69e-21;32!UBERON:0003528;3.68e-20;34!UBERON:0002020;3.68e-20;34!UBERON:0002780;3.92e-20;41!UBERON:0001890;3.92e-20;41!UBERON:0001893;5.97e-19;34!UBERON:0001017;6.27e-19;75!UBERON:0002791;7.54e-17;32!UBERON:0000073;1.44e-15;53!UBERON:0002616;1.44e-15;53!UBERON:0001016;4.37e-15;83!UBERON:0000955;2.56e-14;68!UBERON:0001874;2.05e-13;1!UBERON:0001882;3.13e-13;1!UBERON:0005403;3.13e-13;1!UBERON:0000941;6.42e-13;1!UBERON:0001785;6.42e-13;1!UBERON:0002464;6.42e-13;1!UBERON:0004904;6.42e-13;1!UBERON:0001021;6.42e-13;1!UBERON:0007190;6.42e-13;1!UBERON:0001872;3.26e-10;5!UBERON:0002298;8.74e-09;6!UBERON:0004732;1.11e-08;13!UBERON:0007023;3.72e-08;114!UBERON:0001894;1.25e-07;7!UBERON:0010314;1.76e-07;132!UBERON:0001875;2.43e-07;2!UBERON:0006514;2.43e-07;2!UBERON:0002148;2.74e-07;2!UBERON:0006331;2.74e-07;2!UBERON:0009662;2.74e-07;2!UBERON:0001897;4.29e-07;2!UBERON:0003714;4.29e-07;2!UBERON:0005162;4.29e-07;2!UBERON:0000122;4.29e-07;2!UBERON:0010225;4.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.25e-48,4;UBERON:0002435,4.25e-48,4;UBERON:0000204,4.25e-48,4;UBERON:0010082,4.25e-48,4;UBERON:0000125,1.91e-47,9;UBERON:0002308,1.91e-47,9;UBERON:0001049,2.60e-44,56;UBERON:0005068,2.60e-44,56;UBERON:0006241,2.60e-44,56;UBERON:0007135,2.60e-44,56;UBERON:0009663,1.07e-42,7;UBERON:0005383,1.01e-36,3;UBERON:0005382,1.01e-36,3;UBERON:0002240,2.53e-35,3;UBERON:0005174,2.53e-35,3;UBERON:0001137,2.53e-35,3;UBERON:0003075,3.73e-34,82;UBERON:0007284,3.73e-34,82;UBERON:0002420,3.08e-33,9;UBERON:0007245,3.08e-33,9;UBERON:0010009,3.08e-33,9;UBERON:0010011,3.08e-33,9;UBERON:0000454,3.08e-33,9;UBERON:0002346,1.67e-32,86;UBERON:0001016,1.22e-30,89;UBERON:0001017,6.80e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=70bp_to_ENST00000502798_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_SV2C_5end | |||
|id=chr5:75379067..75379080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.81e-35;3!UBERON:0003057;3.81e-35;3!UBERON:0010122;3.88e-25;2!UBERON:0006222;3.13e-13;1!UBERON:0005425;6.42e-13;1!UBERON:0006601;2.27e-11;82 | |||
|ontology_enrichment_disease=DOID:3095!1.68e-07!22;DOID:2994!1.68e-07!22;DOID:169!3.08e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SV2C | |||
}} |
Revision as of 16:26, 13 September 2013
Short description: | p5@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 70bp_to_ENST00000502798_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.17e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.