FFCP PHASE1:Mm9::chr18:23912236..23912260,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=212307|HGNC=|MCL_coexpression_id=728|UniProt=|association_with_transcript=0bp_to_ENSMUST00000149943_5end|description=CAGE_peak_5_at_Mapre2_5end|id=chr18:23912236..23912260,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,3.96e-08,6;CL:0000677,3.96e-08,6;CL:0000584,3.96e-08,6;CL:0000075,6.27e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.85e-10!59;UBERON:0000344!9.89e-10!15;UBERON:0004923!9.71e-09!24;UBERON:0001242!3.47e-08!13;UBERON:0000060!3.47e-08!13;UBERON:0001262!3.47e-08!13;UBERON:0004786!3.47e-08!13;UBERON:0000160!3.70e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.12e-15,47;UBERON:0000160,5.45e-14,31;UBERON:0000014,4.68e-13,5;UBERON:0001003,4.68e-13,5;UBERON:0002097,4.68e-13,5;UBERON:0002199,4.68e-13,5;UBERON:0007029,4.68e-13,5;UBERON:0007376,4.68e-13,5;UBERON:0002416,4.68e-13,5;UBERON:0007383,4.68e-13,5;UBERON:0004923,1.71e-12,24;UBERON:0000344,3.35e-12,15;UBERON:0001242,4.51e-09,13;UBERON:0001262,4.51e-09,13;UBERON:0004786,4.51e-09,13;UBERON:0005631,9.04e-08,3;UBERON:0000478,9.04e-08,3;UBERON:0000158,9.04e-08,3;UBERON:0004119,1.32e-07,118;UBERON:0000925,1.32e-07,118;UBERON:0006595,1.32e-07,118;UBERON:0003102,2.03e-07,22;UBERON:0000331,2.40e-07,3;UBERON:0002116,2.40e-07,3;UBERON:0001204,2.40e-07,3;UBERON:0001168,2.40e-07,3;UBERON:0007023,4.17e-07,51|phase1_expression=0,1.39590163055744,1.36499771816861,1.20985684522732,1.00179145989269,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,1.59992422793407,1.83527424853736,0,0.86152399231815,1.29282739611533,2.28028103347649,1.26015064879965,1.99557459589774,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,3.95511948374998,0,0.884610551949874,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,2.52722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,1.23469281844766,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.697601834251224,1.3413670069981,1.05088808130453,0.987359099480883,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0,0.444756087689741,0,1.89811624617805,0.823494773620054,1.00534083520108,1.79060824837036,0.38992817423824,1.79763881730844,1.94524244887225,1.1948476395262,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,2.1183207086382,0,5.60613260001032,5.65125493435669,5.60910201831849,4.8942661041286,2.9545361954111,0.291480836629851,0.370850604021019,0,0,0,0,0.410082683163076,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0.627264888043406,0.655087691238533,2.15782954215713,3.05817786183743,2.09404753587224,1.55537967950151,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,4.76133805591944,0.221985953374065,0,0,0.19318959403219,0,0,6.21668299329291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.578719832943424,2.24829520144151,0.701794825336225,1.50409737833809,0.765153328275374,0,0|short_description=p5@Mapre2}} | ||
|EntrezGene=212307 | |||
|HGNC= | |||
|MCL_coexpression_id=728 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000149943_5end | |||
|description=CAGE_peak_5_at_Mapre2_5end | |||
|id=chr18:23912236..23912260,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.96e-08,6;CL:0000677,3.96e-08,6;CL:0000584,3.96e-08,6;CL:0000075,6.27e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.85e-10!59;UBERON:0000344!9.89e-10!15;UBERON:0004923!9.71e-09!24;UBERON:0001242!3.47e-08!13;UBERON:0000060!3.47e-08!13;UBERON:0001262!3.47e-08!13;UBERON:0004786!3.47e-08!13;UBERON:0000160!3.70e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.12e-15,47;UBERON:0000160,5.45e-14,31;UBERON:0000014,4.68e-13,5;UBERON:0001003,4.68e-13,5;UBERON:0002097,4.68e-13,5;UBERON:0002199,4.68e-13,5;UBERON:0007029,4.68e-13,5;UBERON:0007376,4.68e-13,5;UBERON:0002416,4.68e-13,5;UBERON:0007383,4.68e-13,5;UBERON:0004923,1.71e-12,24;UBERON:0000344,3.35e-12,15;UBERON:0001242,4.51e-09,13;UBERON:0001262,4.51e-09,13;UBERON:0004786,4.51e-09,13;UBERON:0005631,9.04e-08,3;UBERON:0000478,9.04e-08,3;UBERON:0000158,9.04e-08,3;UBERON:0004119,1.32e-07,118;UBERON:0000925,1.32e-07,118;UBERON:0006595,1.32e-07,118;UBERON:0003102,2.03e-07,22;UBERON:0000331,2.40e-07,3;UBERON:0002116,2.40e-07,3;UBERON:0001204,2.40e-07,3;UBERON:0001168,2.40e-07,3;UBERON:0007023,4.17e-07,51 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,1.20985684522732,1.00179145989269,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,1.59992422793407,1.83527424853736,0,0.86152399231815,1.29282739611533,2.28028103347649,1.26015064879965,1.99557459589774,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,3.95511948374998,0,0.884610551949874,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,2.52722758433675,0,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0,1.0447564995665,1.23469281844766,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.697601834251224,1.3413670069981,1.05088808130453,0.987359099480883,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0,0.444756087689741,0,1.89811624617805,0.823494773620054,1.00534083520108,1.79060824837036,0.38992817423824,1.79763881730844,1.94524244887225,1.1948476395262,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,2.1183207086382,0,5.60613260001032,5.65125493435669,5.60910201831849,4.8942661041286,2.9545361954111,0.291480836629851,0.370850604021019,0,0,0,0,0.410082683163076,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0.627264888043406,0.655087691238533,2.15782954215713,3.05817786183743,2.09404753587224,1.55537967950151,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,4.76133805591944,0.221985953374065,0,0,0.19318959403219,0,0,6.21668299329291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.154936841185966,0.578719832943424,2.24829520144151,0.701794825336225,1.50409737833809,0.765153328275374,0,0 | |||
|short_description=p5@Mapre2 | |||
}} |
Revision as of 15:49, 13 September 2013
Short description: | p5@Mapre2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mapre2_5end |
Coexpression cluster: | MCL_coexpression_mm9:728 |
Association with transcript: | 0bp_to_ENSMUST00000149943_5end |
EntrezGene: | Mapre2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.96e-08 | 6 |
gut absorptive cell | 3.96e-08 | 6 |
enterocyte | 3.96e-08 | 6 |
columnar/cuboidal epithelial cell | 6.27e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.12e-15 | 47 |
intestine | 5.45e-14 | 31 |
zone of skin | 4.68e-13 | 5 |
skin epidermis | 4.68e-13 | 5 |
skin of body | 4.68e-13 | 5 |
integument | 4.68e-13 | 5 |
surface | 4.68e-13 | 5 |
outer epithelium | 4.68e-13 | 5 |
integumental system | 4.68e-13 | 5 |
enveloping layer of ectoderm | 4.68e-13 | 5 |
organ component layer | 1.71e-12 | 24 |
mucosa | 3.35e-12 | 15 |
intestinal mucosa | 4.51e-09 | 13 |
wall of intestine | 4.51e-09 | 13 |
gastrointestinal system mucosa | 4.51e-09 | 13 |
extraembryonic membrane | 9.04e-08 | 3 |
extraembryonic structure | 9.04e-08 | 3 |
membranous layer | 9.04e-08 | 3 |
endoderm-derived structure | 1.32e-07 | 118 |
endoderm | 1.32e-07 | 118 |
presumptive endoderm | 1.32e-07 | 118 |
surface structure | 2.03e-07 | 22 |
ileal mucosa | 2.40e-07 | 3 |
ileum | 2.40e-07 | 3 |
mucosa of small intestine | 2.40e-07 | 3 |
wall of small intestine | 2.40e-07 | 3 |
adult organism | 4.17e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.